FFCP PHASE1:Hg19::chr9:33817461..33817524,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:33817461..33817524,+
|short_description=p2@UBE2R2
|description=CAGE_peak_2_at_UBE2R2_5end
|association_with_transcript=-40bp_to_ENST00000263228_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54926 | |EntrezGene=54926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19907 | |HGNC=19907 | ||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |UniProt=Q712K3 | ||
|association_with_transcript=-40bp_to_ENST00000263228_5end | |||
|cluster_id=chr9:33817461..33817524,+ | |||
|description=CAGE_peak_2_at_UBE2R2_5end | |||
|id=chr9:33817461..33817524,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-15!42;CL:0000115!1.82e-13!35;CL:0000860!3.47e-13!45;CL:0002139!6.51e-12!24;CL:0002078!1.64e-10!44;CL:0000071!2.98e-09!18;CL:0002546!2.98e-09!18;CL:0000222!4.73e-09!119;CL:0000766!7.30e-08!76;CL:1000449!5.64e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.37e-12;36!CL:0002139;6.75e-12;24!CL:0000860;3.67e-11;33!CL:0002057;3.67e-11;33!CL:0000071;3.26e-09;18!CL:0000576;8.00e-08;48!CL:0002078;2.59e-07;45!CL:0000473;2.79e-07;39!CL:0000234;2.79e-07;39!CL:1000449;7.45e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.07e-15,42;CL:0002057,1.07e-15,42;CL:0000115,5.41e-14,36;CL:0000473,2.93e-12,48;CL:0000234,2.93e-12,48;CL:0002139,6.51e-12,24;CL:0002078,5.52e-11,45;CL:0000222,1.57e-09,121;CL:0000071,2.98e-09,18;CL:0002546,2.98e-09,18;CL:0000766,3.30e-09,72;CL:0002194,3.54e-07,59;CL:0000576,3.54e-07,59;CL:0000040,3.54e-07,59;CL:0000559,3.54e-07,59;CL:0002321,6.53e-07,250;CL:1000449,6.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;8.90e-12;42!CL:0002546;3.26e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.89e-17!216;UBERON:0000926!5.95e-16!448;UBERON:0004120!5.95e-16!448;UBERON:0006603!5.95e-16!448;UBERON:0001009!1.01e-12!113;UBERON:0002049!6.61e-12!79;UBERON:0007798!6.61e-12!79;UBERON:0004535!6.72e-12!110;UBERON:0000468!9.40e-12!659;UBERON:0000055!7.17e-11!69;UBERON:0000467!7.92e-11!625;UBERON:0000922!8.15e-11!612;UBERON:0000480!1.01e-10!626;UBERON:0003914!1.04e-10!118;UBERON:0000490!1.44e-10!138;UBERON:0002050!1.85e-09!605;UBERON:0005423!1.85e-09!605;UBERON:0000923!2.54e-09!604;UBERON:0005291!2.54e-09!604;UBERON:0006598!2.54e-09!604;UBERON:0002532!2.54e-09!604;UBERON:0001986!2.98e-09!18;UBERON:0004638!2.98e-09!18;UBERON:0004852!2.98e-09!18;UBERON:0001981!1.57e-08!60;UBERON:0007500!1.57e-08!60;UBERON:0004537!1.57e-08!60;UBERON:0006965!1.57e-08!60;UBERON:0002193!4.39e-08!112;UBERON:0000487!1.03e-07!22;UBERON:0002405!2.11e-07!115;UBERON:0005256!2.18e-07!143;UBERON:0004872!4.82e-07!84;UBERON:0004211!5.64e-07!16;UBERON:0001285!5.64e-07!16;UBERON:0007684!5.64e-07!16;UBERON:0003220!5.64e-07!16;UBERON:0004208!5.64e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.26e-09;18!UBERON:0001986;3.26e-09;18!UBERON:0004852;3.26e-09;18!UBERON:0000487;9.14e-08;22!UBERON:0000490;5.82e-07;33!UBERON:0003914;7.36e-07;74!UBERON:0006555;7.45e-07;15!UBERON:0004819;7.45e-07;15!UBERON:0001285;7.45e-07;15!UBERON:0007684;7.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.89e-16,203;UBERON:0000926,8.98e-16,315;UBERON:0004120,8.98e-16,315;UBERON:0006603,8.98e-16,315;UBERON:0001009,7.51e-13,112;UBERON:0002049,4.48e-12,78;UBERON:0007798,4.48e-12,78;UBERON:0004535,5.05e-12,109;UBERON:0000490,2.02e-11,148;UBERON:0000055,4.79e-11,68;UBERON:0000922,6.88e-11,592;UBERON:0003914,1.47e-10,117;UBERON:0005423,3.52e-10,581;UBERON:0000923,1.96e-09,560;UBERON:0010316,1.96e-09,560;UBERON:0005291,1.96e-09,560;UBERON:0006598,1.96e-09,560;UBERON:0010317,1.96e-09,560;UBERON:0002532,1.96e-09,560;UBERON:0004638,2.98e-09,18;UBERON:0001986,2.98e-09,18;UBERON:0004852,2.98e-09,18;UBERON:0002193,3.72e-09,108;UBERON:0002050,6.31e-09,564;UBERON:0007500,1.09e-08,59;UBERON:0001981,1.09e-08,59;UBERON:0004537,1.09e-08,59;UBERON:0006965,1.09e-08,59;UBERON:0002204,7.50e-08,167;UBERON:0003104,8.72e-08,160;UBERON:0009142,8.72e-08,160;UBERON:0000487,1.03e-07,22;UBERON:0002405,1.23e-07,93;UBERON:0002390,2.99e-07,98;UBERON:0003061,2.99e-07,98;UBERON:0004872,3.87e-07,83;UBERON:0007503,5.19e-07,78;UBERON:0004211,6.97e-07,15;UBERON:0009773,6.97e-07,15;UBERON:0001231,6.97e-07,15;UBERON:0001285,6.97e-07,15;UBERON:0007684,6.97e-07,15;UBERON:0004208,6.97e-07,15 | |||
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| ||
|short_description=p2@UBE2R2 | |||
}} | }} |
Latest revision as of 04:37, 17 September 2015
Short description: | p2@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE2R2_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000263228_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.07e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-15 | 42 |
endothelial cell | 5.41e-14 | 36 |
defensive cell | 2.93e-12 | 48 |
phagocyte | 2.93e-12 | 48 |
endothelial cell of vascular tree | 6.51e-12 | 24 |
meso-epithelial cell | 5.52e-11 | 45 |
mesodermal cell | 1.57e-09 | 121 |
blood vessel endothelial cell | 2.98e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-09 | 18 |
myeloid leukocyte | 3.30e-09 | 72 |
monopoietic cell | 3.54e-07 | 59 |
monocyte | 3.54e-07 | 59 |
monoblast | 3.54e-07 | 59 |
promonocyte | 3.54e-07 | 59 |
embryonic cell | 6.53e-07 | 250 |
epithelial cell of nephron | 6.97e-07 | 15 |