FFCP PHASE1:Hg19::chr15:33023095..33023177,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:33023095..33023177,+
|short_description=p2@GREM1
|description=CAGE_peak_2_at_GREM1_5end
|association_with_transcript=203bp_to_AF045800,BC069525,CU686886,H...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26585 | |EntrezGene=26585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |HGNC=2001 | ||
|TSSclassifier=strong | |||
|UniProt=O60565 | |UniProt=O60565 | ||
|association_with_transcript=203bp_to_AF045800,BC069525,CU686886,HQ448400_5end | |||
|cluster_id=chr15:33023095..33023177,+ | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_2_at_GREM1_5end | |||
|id=chr15:33023095..33023177,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.06e-35!180;CL:0000057!4.44e-22!75;CL:0000680!1.18e-17!57;CL:0000056!1.18e-17!57;CL:0000355!1.18e-17!57;CL:0000192!6.97e-17!42;CL:0000514!6.97e-17!42;CL:0000187!7.23e-16!54;CL:0000359!7.88e-14!32;CL:0000183!9.48e-14!59;CL:0000393!3.05e-13!60;CL:0000211!3.05e-13!60;CL:0002620!3.00e-12!23;CL:0000048!1.40e-11!430;CL:0000723!1.01e-10!436;CL:0002334!3.11e-10!12;CL:0000034!7.02e-10!444;CL:0000222!6.87e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.50e-15;23!CL:0000359;1.05e-14;32!CL:0002334;1.38e-13;12!CL:0000192;1.08e-12;43!CL:0002320;4.95e-10;188!CL:0000134;6.04e-10;55!CL:0000057;7.42e-09;73!CL:0000048;1.25e-08;58!CL:0000723;2.82e-08;61!CL:0000187;1.12e-07;55!CL:0000499;2.85e-07;28!CL:0002539;6.12e-07;10!CL:0002559;8.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.59e-25,76;CL:0000048,3.94e-21,427;CL:0000723,3.00e-20,433;CL:0000034,4.08e-19,441;CL:0000192,2.92e-18,43;CL:0000514,2.92e-18,43;CL:0000680,4.07e-16,58;CL:0000056,4.07e-16,58;CL:0000355,4.07e-16,58;CL:0002620,1.04e-15,23;CL:0000359,5.23e-15,32;CL:0000187,5.78e-14,55;CL:0002334,1.29e-13,12;CL:0000393,1.45e-11,61;CL:0000211,1.45e-11,61;CL:0002320,4.16e-11,361;CL:0000134,8.00e-10,354;CL:0000219,4.68e-08,386;CL:0000499,3.13e-07,28;CL:0002539,6.04e-07,10;CL:0002559,8.22e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-12;43!CL:0000355;1.01e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.19e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.45e-11;14!DOID:17;7.91e-07;5!DOID:450;7.91e-07;5!DOID:66;7.91e-07;5!DOID:423;7.91e-07;5!DOID:0080000;7.91e-07;5!DOID:11722;7.91e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.60e-11,14;DOID:17,7.93e-07,5;DOID:450,7.93e-07,5;DOID:66,7.93e-07,5;DOID:423,7.93e-07,5;DOID:0080000,7.93e-07,5;DOID:11722,7.93e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.93e-22!83;UBERON:0002329!9.93e-22!83;UBERON:0003077!9.93e-22!83;UBERON:0003059!9.93e-22!83;UBERON:0007282!9.93e-22!83;UBERON:0009618!9.93e-22!83;UBERON:0007285!9.93e-22!83;UBERON:0004290!8.30e-19!70;UBERON:0000486!1.12e-15!82;UBERON:0002385!1.25e-15!63;UBERON:0001015!1.25e-15!63;UBERON:0000383!1.25e-15!63;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0005256!7.68e-15!143;UBERON:0000475!1.95e-12!365;UBERON:0002199!1.35e-11!45;UBERON:0002416!1.35e-11!45;UBERON:0002097!5.45e-11!40;UBERON:0003102!2.42e-10!95;UBERON:0002100!2.02e-09!216;UBERON:0001637!6.30e-09!42;UBERON:0003509!6.30e-09!42;UBERON:0004572!6.30e-09!42;UBERON:0004573!3.33e-08!33;UBERON:0004571!3.33e-08!33;UBERON:0001135!4.69e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.87e-10;9!UBERON:0000042;4.87e-10;9!UBERON:0002097;9.20e-10;41!UBERON:0002199;4.06e-09;46!UBERON:0002416;4.06e-09;46!UBERON:0002384;5.75e-09;198!UBERON:0003688;5.09e-08;6!UBERON:0002358;5.09e-08;6!UBERON:0003684;5.09e-08;6!UBERON:0001178;5.09e-08;6!UBERON:0001135;9.44e-08;15!UBERON:0004573;1.51e-07;33!UBERON:0004571;1.51e-07;33!UBERON:0003102;2.21e-07;50!UBERON:0000992;5.95e-07;13!UBERON:0004237;6.12e-07;10!UBERON:0004695;6.12e-07;10!UBERON:0002111;6.12e-07;10!UBERON:0004178;6.12e-07;10!UBERON:0002073;8.29e-07;5!UBERON:0004905;8.73e-07;8!UBERON:0000982;8.73e-07;8!UBERON:0004770;8.73e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.04e-19,73;UBERON:0002329,6.83e-19,71;UBERON:0003059,6.83e-19,71;UBERON:0007282,6.83e-19,71;UBERON:0004290,6.83e-19,71;UBERON:0009618,6.83e-19,71;UBERON:0003077,2.00e-18,72;UBERON:0007285,2.00e-18,72;UBERON:0000486,7.33e-17,83;UBERON:0007503,7.87e-17,78;UBERON:0001134,2.57e-14,62;UBERON:0002036,2.57e-14,62;UBERON:0003082,2.57e-14,62;UBERON:0002199,4.75e-14,46;UBERON:0002416,4.75e-14,46;UBERON:0002385,1.66e-13,64;UBERON:0001015,1.66e-13,64;UBERON:0000383,1.66e-13,64;UBERON:0002097,7.93e-13,41;UBERON:0005256,6.40e-12,122;UBERON:0002384,1.69e-11,371;UBERON:0003102,3.66e-11,99;UBERON:0003104,1.10e-10,160;UBERON:0009142,1.10e-10,160;UBERON:0001637,4.59e-09,42;UBERON:0003509,4.59e-09,42;UBERON:0004572,4.59e-09,42;UBERON:0004573,4.11e-08,33;UBERON:0004571,4.11e-08,33;UBERON:0003688,5.33e-08,6;UBERON:0002358,5.33e-08,6;UBERON:0003684,5.33e-08,6;UBERON:0001178,5.33e-08,6;UBERON:0001135,9.44e-08,15;UBERON:0002100,1.02e-07,199;UBERON:0000926,1.64e-07,315;UBERON:0004120,1.64e-07,315;UBERON:0006603,1.64e-07,315;UBERON:0000992,5.10e-07,13;UBERON:0004237,6.04e-07,10;UBERON:0004695,6.04e-07,10;UBERON:0002111,6.04e-07,10;UBERON:0004178,6.04e-07,10;UBERON:0004457,6.32e-07,12;UBERON:0000042,6.32e-07,12;UBERON:0000490,6.80e-07,148;UBERON:0002073,8.22e-07,5;UBERON:0005086,8.22e-07,5 | |||
|phase1_expression=13.9892352038329,62.3032524522761,9.72585388262201,23.01685862122,26.8176656656373,35.7658794881151,5.06599756336621,0,0,0.737201809504527,0,0,0,1.11389717664042,6.95934489028623,47.0627602516243,34.3535880973667,27.0214733443328,26.8363039334779,0.123121058076788,2.04000691244253,0,0,0.136874425072884,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,4.01070328508712,1.01392563272577,3.9764297352555,15.5723158496843,0,0.443458794925128,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.2183915076646,0.886413581652058,4.237093786023,6.88407889797153,6.02936249737207,3.36406560085384,0,1.72667283892012,0.311211035399766,0.808264032418128,0.653847612453835,0,0.576175924479999,0,2.49728061464256,0,1.94283284717341,2.70099346880659,1.94247533241758,2.94946694074722,1.02077085627447,1.84251475967652,1.23990937410919,23.7600571456411,85.8016244596592,0,0.718618141816238,0.168336113954066,1.25118519871964,0.554128230968366,21.9488810440419,107.270728529657,51.9823683816825,0.340296549480063,17.0420153904419,10.0371972744727,20.9812582147966,24.0072876867522,21.7440836693106,11.8514648420989,13.4004136558745,8.27004027982204,30.9849676412612,15.9033277773792,16.4769318569716,2.26304479546337,19.5255275884138,19.1428986632516,15.4300139002544,0,0,0,0,0,0,0.10366105501537,0,0,32.8544017892614,114.496886998334,5.52539685409922,17.1816133371832,13.7157101517221,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13110241973656,0,0,0.112131084345361,0,0.95339771567235,1.16344544182,0,6.762422020448,9.57377219705534,23.9217104896142,1.02882949704857,1.41849132023278,0.532844358032199,2.43062589218851,0,0,0.65147236858747,0,0,0.904318131178758,7.84380112740265,0.099972991182057,0,0.502257091432126,0,1.19812427745791,0,2.85273810081437,7.38384664004654,12.328579353023,11.4599016473533,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,3.00102312635806,1.35632511849868,16.6376689224646,86.002772600232,61.9770491083363,20.7340304537102,0.902838299183157,4.5481500811197,2.0694614258501,5.97803038681893,5.53107505625109,5.73431855489347,0.195801157462741,0,0,0,0,0,0,0.30239029332968,15.6307918925829,8.28694655755537,74.3749250247645,16.273671955474,19.4448754645347,43.9131204722048,13.3576259800492,36.5476974312294,7.45759246315134,2.95657761649713,23.366449313263,14.8749284428748,0,0,0,1.14814448164607,11.1075612484097,11.2766996865105,0,0.385076685522074,0,1.46139224653261,0.633309773357254,0,0,2.80690690932781,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0.574265537996172,0.650060246036521,20.8889108797407,0.096670718292122,0.154048617114644,0,3.30807773962873,0.537101224341368,0.435050081742686,0.767039646744908,0.178064071293475,0,0,0.127612712494584,0,4.64845549297286,18.2591161161771,1.3940745403212,0.616067160352178,0,5.21959795245044,3.33583594387056,1.43124886741991,2.232950216158,3.79655309662471,3.0500831027812,0.255897791311334,1.71175595213568,0.318203247925937,4.70969184119538,4.13706652441624,11.8050922786504,9.77842939469197,0.808729926293264,3.17020642346017,2.94880919367287,0,8.77368562672624,7.39551027297288,2.45699840534374,4.94919011837995,1.13008116620243,1.10273068709225,0,2.63070531152258,2.31510213706675,1.9676842561399,3.85529716229138,3.717881977197,1.97186921772569,1.00387946542836,0.196498082026242,4.63672366925625,0.354761064070598,7.81098250601357,6.91519275215794,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0.779160935160341,0,0,0,1.65770349318689,0,0,0,35.7695525811079,0,0,0,0.493217028184668,0,4.44547960578548,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06687918137261,0,0,0,0.596143835108969,0.126621591911757,0.391102765469606,0.320635281006135,4.4825128895264,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,65.5745788047174,0,0,0,0,0,0,0,0.953423842781029,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0.542999601753713,3.45688596480507,4.57222304153173,0,0,8.34901306748566,0,0,0,0.904980694530854,0.92562821219883,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,1.09823638411767,0.500763722825999,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0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| ||
|short_description=p2@GREM1 | |||
}} | }} |
Latest revision as of 04:33, 17 September 2015
Short description: | p2@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 203bp_to_AF045800, BC069525, CU686886, HQ448400_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | O60565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.59e-25 | 76 |
multi fate stem cell | 3.94e-21 | 427 |
somatic stem cell | 3.00e-20 | 433 |
stem cell | 4.08e-19 | 441 |
smooth muscle cell | 2.92e-18 | 43 |
smooth muscle myoblast | 2.92e-18 | 43 |
muscle precursor cell | 4.07e-16 | 58 |
myoblast | 4.07e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.07e-16 | 58 |
skin fibroblast | 1.04e-15 | 23 |
vascular associated smooth muscle cell | 5.23e-15 | 32 |
muscle cell | 5.78e-14 | 55 |
preadipocyte | 1.29e-13 | 12 |
electrically responsive cell | 1.45e-11 | 61 |
electrically active cell | 1.45e-11 | 61 |
connective tissue cell | 4.16e-11 | 361 |
mesenchymal cell | 8.00e-10 | 354 |
motile cell | 4.68e-08 | 386 |
stromal cell | 3.13e-07 | 28 |
aortic smooth muscle cell | 6.04e-07 | 10 |
hair follicle cell | 8.22e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.60e-11 | 14 |
musculoskeletal system disease | 7.93e-07 | 5 |
myotonic disease | 7.93e-07 | 5 |
muscle tissue disease | 7.93e-07 | 5 |
myopathy | 7.93e-07 | 5 |
muscular disease | 7.93e-07 | 5 |
myotonic dystrophy | 7.93e-07 | 5 |