FFCP PHASE1:Hg19::chr1:153004879..153004890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=57bp_to_uc009wnx.1_5end | |||
|cluster_id=chr1:153004879..153004890,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_4_at_SPRR1B_5end | |||
|id=chr1:153004879..153004890,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.12e-22!43;CL:0002159!1.05e-16!13;CL:0000223!1.53e-15!59;CL:0000622!2.03e-15!5;CL:0002621!2.27e-14!3;CL:0000154!7.29e-13!6;CL:0002251!1.47e-12!21;CL:0002368!1.91e-11!13;CL:0000575!1.27e-10!2;CL:0000317!2.32e-10!2;CL:1000448!2.32e-10!2;CL:0002308!2.32e-10!2;CL:0002140!2.32e-10!2;CL:0000066!4.97e-10!254;CL:0002077!8.67e-10!33;CL:0000362!2.02e-09!8;CL:0000150!1.37e-08!9;CL:0002623!2.40e-07!3;CL:0000240!3.38e-07!6;CL:0000311!3.38e-07!6;CL:0000079!3.38e-07!6;CL:0000237!3.38e-07!6;CL:0000036!3.38e-07!6;CL:0000357!3.38e-07!6;CL:0000114!3.38e-07!6;CL:0002231!6.96e-07!3;CL:0002328!7.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;9.26e-26;2!CL:0000622;2.98e-23;5!CL:0000154;1.71e-19;6!CL:0002623;1.13e-17;3!CL:0002621;2.71e-17;3!CL:0000150;3.30e-13;9!CL:0002251;3.51e-10;20!CL:0002159;1.21e-08;14!CL:0000317;1.09e-07;2!CL:1000448;1.09e-07;2!CL:0002308;1.09e-07;2!CL:0002140;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,8.70e-26,2;CL:0000622,3.75e-23,5;CL:0000154,2.07e-19,6;CL:0002623,1.51e-17,3;CL:0002621,2.71e-17,3;CL:0000150,3.74e-13,9;CL:0002251,3.82e-10,20;CL:0002159,1.18e-08,14;CL:0000317,1.05e-07,2;CL:1000448,1.05e-07,2;CL:0002308,1.05e-07,2;CL:0002140,1.05e-07,2;CL:0002076,2.82e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.25e-14;1!UBERON:0008814;9.25e-08;2!UBERON:0010056;9.25e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.33e-13;1!DOID:3149;1.33e-13;1!DOID:3451;1.93e-07;2!DOID:4159;1.93e-07;2!DOID:0060122;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.42e-13,1;DOID:3149,1.42e-13,1;DOID:3451,1.99e-07,2;DOID:4159,1.99e-07,2;DOID:0060122,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.90e-16!21;UBERON:0000165!1.35e-14!28;UBERON:0000930!1.35e-14!28;UBERON:0003102!1.42e-14!95;UBERON:0001949!2.27e-14!3;UBERON:0001004!4.13e-14!72;UBERON:0000161!8.98e-14!35;UBERON:0001444!2.15e-11!48;UBERON:0002419!2.32e-10!2;UBERON:0007771!2.32e-10!2;UBERON:0003297!2.32e-10!2;UBERON:0001821!2.32e-10!2;UBERON:0003487!2.32e-10!2;UBERON:0001820!2.32e-10!2;UBERON:0005089!2.32e-10!2;UBERON:0005088!2.32e-10!2;UBERON:0003127!9.53e-10!2;UBERON:0004119!1.16e-08!169;UBERON:0000925!1.16e-08!169;UBERON:0006595!1.16e-08!169;UBERON:0000065!5.40e-08!53;UBERON:0007196!1.20e-07!14;UBERON:0001558!1.20e-07!14;UBERON:0001723!1.71e-07!3;UBERON:0001033!1.71e-07!3;UBERON:0010056!1.71e-07!3;UBERON:0004815!7.17e-07!3;UBERON:0002031!7.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.98e-18;3!UBERON:0001033;5.98e-18;3!UBERON:0001949;2.71e-17;3!UBERON:0000165;9.56e-16;28!UBERON:0005795;7.55e-14;1!UBERON:0000964;2.14e-13;4!UBERON:0010409;2.14e-13;4!UBERON:0000161;1.05e-10;19!UBERON:0000166;1.05e-10;19!UBERON:0000486;7.10e-10;12!UBERON:0000033;8.66e-10;50!UBERON:0001044;2.61e-09;6!UBERON:0003293;2.61e-09;6!UBERON:0003294;2.61e-09;6!UBERON:0010047;2.61e-09;6!UBERON:0003408;2.61e-09;6!UBERON:0000167;2.61e-09;6!UBERON:0007811;2.78e-09;52!UBERON:0000020;5.21e-09;23!UBERON:0001041;1.09e-08;14!UBERON:0001032;1.21e-08;24!UBERON:0004456;1.21e-08;24!UBERON:0001444;3.87e-08;48!UBERON:0003929;6.08e-08;7!UBERON:0002419;1.09e-07;2!UBERON:0007771;1.09e-07;2!UBERON:0003297;1.09e-07;2!UBERON:0001821;1.09e-07;2!UBERON:0003487;1.09e-07;2!UBERON:0001820;1.09e-07;2!UBERON:0000153;1.22e-07;54!UBERON:0003350;4.69e-07;8!UBERON:0001828;4.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.65e-20,22;UBERON:0001723,5.99e-18,3;UBERON:0001033,5.99e-18,3;UBERON:0010056,5.99e-18,3;UBERON:0001949,2.71e-17,3;UBERON:0000161,2.52e-16,36;UBERON:0001444,1.88e-15,49;UBERON:0000165,3.73e-15,29;UBERON:0000930,3.73e-15,29;UBERON:0003102,7.97e-14,99;UBERON:0000033,2.01e-13,56;UBERON:0000964,2.08e-13,4;UBERON:0010409,2.08e-13,4;UBERON:0004348,2.08e-13,4;UBERON:0005427,2.08e-13,4;UBERON:0000153,4.77e-12,62;UBERON:0007811,4.77e-12,62;UBERON:0001044,3.02e-09,6;UBERON:0003293,3.02e-09,6;UBERON:0003294,3.02e-09,6;UBERON:0010047,3.02e-09,6;UBERON:0000167,3.02e-09,6;UBERON:0000020,1.20e-08,24;UBERON:0001032,1.20e-08,24;UBERON:0004456,1.20e-08,24;UBERON:0002419,1.05e-07,2;UBERON:0007771,1.05e-07,2;UBERON:0003297,1.05e-07,2;UBERON:0001821,1.05e-07,2;UBERON:0003487,1.05e-07,2;UBERON:0001820,1.05e-07,2;UBERON:0005089,1.05e-07,2;UBERON:0005088,1.05e-07,2;UBERON:0003350,4.69e-07,8;UBERON:0001828,4.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.54608682530637,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0.904760751704678,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.10497186723076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,5.85054221432869,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,4.87773168890343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,5.14041787388623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0243108625637,6.22133695632683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,20.4653743023144,4.44903291410865,0.942928742204225,0.573777643141411,0.332660356546013,0,0,0,0,0,0.122241444182866,2.03448089157869,0,0,0 | |||
|short_description=p4@SPRR1B | |||
}} |
Latest revision as of 04:29, 17 September 2015
Short description: | p4@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPRR1B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 57bp_to_uc009wnx.1_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 8.70e-26 | 2 |
acinar cell | 3.75e-23 | 5 |
protein secreting cell | 2.07e-19 | 6 |
acinar cell of salivary gland | 1.51e-17 | 3 |
gingival epithelial cell | 2.71e-17 | 3 |
glandular epithelial cell | 3.74e-13 | 9 |
epithelial cell of alimentary canal | 3.82e-10 | 20 |
general ecto-epithelial cell | 1.18e-08 | 14 |
sebum secreting cell | 1.05e-07 | 2 |
epithelial cell of sweat gland | 1.05e-07 | 2 |
epithelial cell of skin gland | 1.05e-07 | 2 |
acinar cell of sebaceous gland | 1.05e-07 | 2 |
endo-epithelial cell | 2.82e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
oral opening | 4.65e-20 | 22 |
tongue | 5.99e-18 | 3 |
gustatory system | 5.99e-18 | 3 |
future tongue | 5.99e-18 | 3 |
gingival epithelium | 2.71e-17 | 3 |
orifice | 2.52e-16 | 36 |
subdivision of head | 1.88e-15 | 49 |
mouth | 3.73e-15 | 29 |
stomodeum | 3.73e-15 | 29 |
surface structure | 7.97e-14 | 99 |
head | 2.01e-13 | 56 |
cornea | 2.08e-13 | 4 |
eye surface | 2.08e-13 | 4 |
optic eminence | 2.08e-13 | 4 |
corneal primordium | 2.08e-13 | 4 |
anterior region of body | 4.77e-12 | 62 |
craniocervical region | 4.77e-12 | 62 |
saliva-secreting gland | 3.02e-09 | 6 |
gland of oral region | 3.02e-09 | 6 |
gland of foregut | 3.02e-09 | 6 |
oral gland | 3.02e-09 | 6 |
oral cavity | 3.02e-09 | 6 |
sense organ | 1.20e-08 | 24 |
sensory system | 1.20e-08 | 24 |
entire sense organ system | 1.20e-08 | 24 |
skin gland | 1.05e-07 | 2 |
epidermis gland | 1.05e-07 | 2 |
gland of integumental system | 1.05e-07 | 2 |
sebaceous gland | 1.05e-07 | 2 |
skin sebaceous gland | 1.05e-07 | 2 |
sweat gland | 1.05e-07 | 2 |
sweat gland placode | 1.05e-07 | 2 |
sebaceous gland placode | 1.05e-07 | 2 |
epithelium of mucosa | 4.69e-07 | 8 |
gingiva | 4.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.42e-13 | 1 |
keratoacanthoma | 1.42e-13 | 1 |
skin carcinoma | 1.99e-07 | 2 |
skin cancer | 1.99e-07 | 2 |
integumentary system cancer | 1.99e-07 | 2 |