FFCP PHASE1:Hg19::chr1:153004879..153004890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6699 | |EntrezGene=6699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |HGNC=11260 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_uc009wnx.1_5end | |association_with_transcript=57bp_to_uc009wnx.1_5end | ||
|cluster_id=chr1:153004879..153004890,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_4_at_SPRR1B_5end | |description=CAGE_peak_4_at_SPRR1B_5end | ||
|id=chr1:153004879..153004890,+ | |id=chr1:153004879..153004890,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.12e-22!43;CL:0002159!1.05e-16!13;CL:0000223!1.53e-15!59;CL:0000622!2.03e-15!5;CL:0002621!2.27e-14!3;CL:0000154!7.29e-13!6;CL:0002251!1.47e-12!21;CL:0002368!1.91e-11!13;CL:0000575!1.27e-10!2;CL:0000317!2.32e-10!2;CL:1000448!2.32e-10!2;CL:0002308!2.32e-10!2;CL:0002140!2.32e-10!2;CL:0000066!4.97e-10!254;CL:0002077!8.67e-10!33;CL:0000362!2.02e-09!8;CL:0000150!1.37e-08!9;CL:0002623!2.40e-07!3;CL:0000240!3.38e-07!6;CL:0000311!3.38e-07!6;CL:0000079!3.38e-07!6;CL:0000237!3.38e-07!6;CL:0000036!3.38e-07!6;CL:0000357!3.38e-07!6;CL:0000114!3.38e-07!6;CL:0002231!6.96e-07!3;CL:0002328!7.17e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.12e-22!43;CL:0002159!1.05e-16!13;CL:0000223!1.53e-15!59;CL:0000622!2.03e-15!5;CL:0002621!2.27e-14!3;CL:0000154!7.29e-13!6;CL:0002251!1.47e-12!21;CL:0002368!1.91e-11!13;CL:0000575!1.27e-10!2;CL:0000317!2.32e-10!2;CL:1000448!2.32e-10!2;CL:0002308!2.32e-10!2;CL:0002140!2.32e-10!2;CL:0000066!4.97e-10!254;CL:0002077!8.67e-10!33;CL:0000362!2.02e-09!8;CL:0000150!1.37e-08!9;CL:0002623!2.40e-07!3;CL:0000240!3.38e-07!6;CL:0000311!3.38e-07!6;CL:0000079!3.38e-07!6;CL:0000237!3.38e-07!6;CL:0000036!3.38e-07!6;CL:0000357!3.38e-07!6;CL:0000114!3.38e-07!6;CL:0002231!6.96e-07!3;CL:0002328!7.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000575;9.26e-26;2!CL:0000622;2.98e-23;5!CL:0000154;1.71e-19;6!CL:0002623;1.13e-17;3!CL:0002621;2.71e-17;3!CL:0000150;3.30e-13;9!CL:0002251;3.51e-10;20!CL:0002159;1.21e-08;14!CL:0000317;1.09e-07;2!CL:1000448;1.09e-07;2!CL:0002308;1.09e-07;2!CL:0002140;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,8.70e-26,2;CL:0000622,3.75e-23,5;CL:0000154,2.07e-19,6;CL:0002623,1.51e-17,3;CL:0002621,2.71e-17,3;CL:0000150,3.74e-13,9;CL:0002251,3.82e-10,20;CL:0002159,1.18e-08,14;CL:0000317,1.05e-07,2;CL:1000448,1.05e-07,2;CL:0002308,1.05e-07,2;CL:0002140,1.05e-07,2;CL:0002076,2.82e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.25e-14;1!UBERON:0008814;9.25e-08;2!UBERON:0010056;9.25e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.33e-13;1!DOID:3149;1.33e-13;1!DOID:3451;1.93e-07;2!DOID:4159;1.93e-07;2!DOID:0060122;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.42e-13,1;DOID:3149,1.42e-13,1;DOID:3451,1.99e-07,2;DOID:4159,1.99e-07,2;DOID:0060122,1.99e-07,2 | |||
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|short_description=p4@SPRR1B | |short_description=p4@SPRR1B | ||
}} | }} |
Latest revision as of 04:29, 17 September 2015
Short description: | p4@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPRR1B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 57bp_to_uc009wnx.1_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 8.70e-26 | 2 |
acinar cell | 3.75e-23 | 5 |
protein secreting cell | 2.07e-19 | 6 |
acinar cell of salivary gland | 1.51e-17 | 3 |
gingival epithelial cell | 2.71e-17 | 3 |
glandular epithelial cell | 3.74e-13 | 9 |
epithelial cell of alimentary canal | 3.82e-10 | 20 |
general ecto-epithelial cell | 1.18e-08 | 14 |
sebum secreting cell | 1.05e-07 | 2 |
epithelial cell of sweat gland | 1.05e-07 | 2 |
epithelial cell of skin gland | 1.05e-07 | 2 |
acinar cell of sebaceous gland | 1.05e-07 | 2 |
endo-epithelial cell | 2.82e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
oral opening | 4.65e-20 | 22 |
tongue | 5.99e-18 | 3 |
gustatory system | 5.99e-18 | 3 |
future tongue | 5.99e-18 | 3 |
gingival epithelium | 2.71e-17 | 3 |
orifice | 2.52e-16 | 36 |
subdivision of head | 1.88e-15 | 49 |
mouth | 3.73e-15 | 29 |
stomodeum | 3.73e-15 | 29 |
surface structure | 7.97e-14 | 99 |
head | 2.01e-13 | 56 |
cornea | 2.08e-13 | 4 |
eye surface | 2.08e-13 | 4 |
optic eminence | 2.08e-13 | 4 |
corneal primordium | 2.08e-13 | 4 |
anterior region of body | 4.77e-12 | 62 |
craniocervical region | 4.77e-12 | 62 |
saliva-secreting gland | 3.02e-09 | 6 |
gland of oral region | 3.02e-09 | 6 |
gland of foregut | 3.02e-09 | 6 |
oral gland | 3.02e-09 | 6 |
oral cavity | 3.02e-09 | 6 |
sense organ | 1.20e-08 | 24 |
sensory system | 1.20e-08 | 24 |
entire sense organ system | 1.20e-08 | 24 |
skin gland | 1.05e-07 | 2 |
epidermis gland | 1.05e-07 | 2 |
gland of integumental system | 1.05e-07 | 2 |
sebaceous gland | 1.05e-07 | 2 |
skin sebaceous gland | 1.05e-07 | 2 |
sweat gland | 1.05e-07 | 2 |
sweat gland placode | 1.05e-07 | 2 |
sebaceous gland placode | 1.05e-07 | 2 |
epithelium of mucosa | 4.69e-07 | 8 |
gingiva | 4.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.42e-13 | 1 |
keratoacanthoma | 1.42e-13 | 1 |
skin carcinoma | 1.99e-07 | 2 |
skin cancer | 1.99e-07 | 2 |
integumentary system cancer | 1.99e-07 | 2 |