FFCP PHASE1:Hg19::chr5:175963959..175964017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22838 | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |HGNC=19180 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAW5 | |UniProt=D6RAW5 | ||
|association_with_transcript=279bp_to_ENST00000504160_5end | |association_with_transcript=279bp_to_ENST00000504160_5end | ||
|cluster_id=chr5:175963959..175964017,- | |||
|description=CAGE_peak_7_at_RNF44_5end | |description=CAGE_peak_7_at_RNF44_5end | ||
|id=chr5:175963959..175964017,- | |id=chr5:175963959..175964017,- | ||
|ontology_enrichment_celltype=CL:0000066!6.75e-27!254;CL:0000223!1.13e-10!59;CL:0002076!4.78e-10!43 | |ontology_enrichment_celltype=CL:0000066!6.75e-27!254;CL:0000223!1.13e-10!59;CL:0002076!4.78e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.29e-08;42!CL:0002251;2.96e-07;20 | |ontology_enrichment_celltype_v019=CL:0002076;6.29e-08;42!CL:0002251;2.96e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.74e-27,253;CL:0000223,1.95e-11,58;CL:0002076,5.06e-10,42;CL:0002251,3.73e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.32e-07;10!UBERON:0005564;2.32e-07;10!CL:0000223;7.86e-07;58 | |ontology_enrichment_development_v019=UBERON:0009117;2.32e-07;10!UBERON:0005564;2.32e-07;10!CL:0000223;7.86e-07;58 | ||
|ontology_enrichment_disease=DOID:162!6.88e-35!235;DOID:14566!1.82e-32!239;DOID:0050687!2.18e-24!143;DOID:305!8.76e-24!106;DOID:0050686!6.41e-16!137;DOID:8692!1.14e-09!31;DOID:1240!2.39e-09!39;DOID:2531!7.74e-09!51;DOID:0060083!7.74e-09!51;DOID:3095!3.13e-07!22;DOID:2994!3.13e-07!22 | |ontology_enrichment_disease=DOID:162!6.88e-35!235;DOID:14566!1.82e-32!239;DOID:0050687!2.18e-24!143;DOID:305!8.76e-24!106;DOID:0050686!6.41e-16!137;DOID:8692!1.14e-09!31;DOID:1240!2.39e-09!39;DOID:2531!7.74e-09!51;DOID:0060083!7.74e-09!51;DOID:3095!3.13e-07!22;DOID:2994!3.13e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.54e-10;31!DOID:1240;3.54e-08;39!DOID:3095;6.01e-08;22!DOID:2994;6.01e-08;22!DOID:305;6.25e-07;106 | |ontology_enrichment_disease_v019=DOID:8692;2.54e-10;31!DOID:1240;3.54e-08;39!DOID:3095;6.01e-08;22!DOID:2994;6.01e-08;22!DOID:305;6.25e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:162,5.96e-36,235;DOID:14566,6.97e-34,239;DOID:0050687,4.35e-25,143;DOID:305,9.52e-24,106;DOID:0050686,9.21e-17,137;DOID:8692,3.22e-10,31;DOID:1240,1.43e-09,39;DOID:2531,1.67e-08,51;DOID:0060083,1.67e-08,51;DOID:3095,7.38e-08,22;DOID:2994,7.38e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.28e-07!104;UBERON:0005177!2.34e-07!107;UBERON:0004119!2.56e-07!169;UBERON:0000925!2.56e-07!169;UBERON:0006595!2.56e-07!169 | |ontology_enrichment_uberon=UBERON:0000464!1.28e-07!104;UBERON:0005177!2.34e-07!107;UBERON:0004119!2.56e-07!169;UBERON:0000925!2.56e-07!169;UBERON:0006595!2.56e-07!169 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.60e-09,101 | |||
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| ||
|short_description=p7@RNF44 | |short_description=p7@RNF44 | ||
}} | }} |
Latest revision as of 04:28, 17 September 2015
Short description: | p7@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 279bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.74e-27 | 253 |
endodermal cell | 1.95e-11 | 58 |
endo-epithelial cell | 5.06e-10 | 42 |
epithelial cell of alimentary canal | 3.73e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.60e-09 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.96e-36 | 235 |
disease of cellular proliferation | 6.97e-34 | 239 |
cell type cancer | 4.35e-25 | 143 |
carcinoma | 9.52e-24 | 106 |
organ system cancer | 9.21e-17 | 137 |
myeloid leukemia | 3.22e-10 | 31 |
leukemia | 1.43e-09 | 39 |
hematologic cancer | 1.67e-08 | 51 |
immune system cancer | 1.67e-08 | 51 |
germ cell and embryonal cancer | 7.38e-08 | 22 |
germ cell cancer | 7.38e-08 | 22 |