FFCP PHASE1:Hg19::chr7:150554953..150554959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-61bp_to_ENST00000480582_5end | |association_with_transcript=-61bp_to_ENST00000480582_5end | ||
|cluster_id=chr7:150554953..150554959,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_18_at_ABP1_5end | |description=CAGE_peak_18_at_ABP1_5end | ||
|id=chr7:150554953..150554959,+ | |id=chr7:150554953..150554959,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.43e-30!3;CL:0000453!8.35e-18!5;CL:0000313!6.77e-11!1;CL:0000990!3.81e-10!8;CL:0000451!2.16e-08!10 | |ontology_enrichment_celltype=CL:0002541!3.43e-30!3;CL:0000453!8.35e-18!5;CL:0000313!6.77e-11!1;CL:0000990!3.81e-10!8;CL:0000451!2.16e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.36e-118;3!CL:0000349;1.53e-19;19!CL:0000453;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.20e-118,3;CL:0000349,1.48e-19,19;CL:0000453,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!6.77e-11!1 | |ontology_enrichment_disease=DOID:2152!6.77e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!3.43e-30!3;UBERON:0000920!3.43e-30!3;UBERON:0003124!1.49e-22!7;UBERON:0000160!6.24e-16!27;UBERON:0000059!4.17e-14!11;UBERON:0005409!3.07e-12!35;UBERON:0005631!2.14e-11!14;UBERON:0000158!2.14e-11!14;UBERON:0000029!6.14e-11!1;UBERON:0004911!6.77e-11!1;UBERON:0001154!1.10e-10!1;UBERON:0001153!1.10e-10!1;UBERON:0001155!4.74e-10!9;UBERON:0004907!1.43e-08!5 | |ontology_enrichment_uberon=UBERON:0000476!3.43e-30!3;UBERON:0000920!3.43e-30!3;UBERON:0003124!1.49e-22!7;UBERON:0000160!6.24e-16!27;UBERON:0000059!4.17e-14!11;UBERON:0005409!3.07e-12!35;UBERON:0005631!2.14e-11!14;UBERON:0000158!2.14e-11!14;UBERON:0000029!6.14e-11!1;UBERON:0004911!6.77e-11!1;UBERON:0001154!1.10e-10!1;UBERON:0001153!1.10e-10!1;UBERON:0001155!4.74e-10!9;UBERON:0004907!1.43e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.36e-118;3!UBERON:0000920;6.36e-118;3!UBERON:0005631;3.24e-36;10!UBERON:0000158;3.24e-36;10!UBERON:0000478;1.16e-15;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.20e-118,3;UBERON:0003124,2.73e-51,7;UBERON:0005631,3.45e-26,14;UBERON:0000158,3.45e-26,14;UBERON:0000478,1.13e-15,24 | |||
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|short_description=p18@ABP1 | |short_description=p18@ABP1 | ||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p18@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -61bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.20e-118 | 3 |
extraembryonic cell | 1.48e-19 | 19 |
Langerhans cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.20e-118 | 3 |
chorion | 2.73e-51 | 7 |
extraembryonic membrane | 3.45e-26 | 14 |
membranous layer | 3.45e-26 | 14 |
extraembryonic structure | 1.13e-15 | 24 |