FFCP PHASE1:Hg19::chr5:175963588..175963604,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22838 | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |HGNC=19180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-257bp_to_ENST00000509404_5end | |association_with_transcript=-257bp_to_ENST00000509404_5end | ||
|cluster_id=chr5:175963588..175963604,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_11_at_RNF44_5end | |description=CAGE_peak_11_at_RNF44_5end | ||
|id=chr5:175963588..175963604,- | |id=chr5:175963588..175963604,- | ||
|ontology_enrichment_celltype=CL:0000037!2.15e-32!172;CL:0000566!2.15e-32!172;CL:0002032!1.61e-30!165;CL:0000837!1.61e-30!165;CL:0000738!2.14e-30!140;CL:0000988!2.63e-30!182;CL:0002087!1.04e-29!119;CL:0002031!5.64e-27!124;CL:0000542!2.39e-23!53;CL:0000051!2.39e-23!53;CL:0000838!2.48e-23!52;CL:0000791!1.61e-13!18;CL:0000789!1.61e-13!18;CL:0002420!1.61e-13!18;CL:0002419!1.61e-13!18;CL:0000790!1.61e-13!18;CL:0000084!8.79e-13!25;CL:0000827!8.79e-13!25;CL:0000763!1.18e-10!112;CL:0000049!1.18e-10!112;CL:0000766!3.08e-10!76;CL:0000945!9.20e-10!24;CL:0000826!9.20e-10!24;CL:0000625!6.28e-09!11;CL:0000236!3.42e-08!14;CL:0000839!6.51e-08!70;CL:0000557!7.68e-08!71;CL:0002194!1.20e-07!63;CL:0000576!1.20e-07!63;CL:0000040!1.20e-07!63;CL:0000559!1.20e-07!63;CL:0002009!3.47e-07!65 | |ontology_enrichment_celltype=CL:0000037!2.15e-32!172;CL:0000566!2.15e-32!172;CL:0002032!1.61e-30!165;CL:0000837!1.61e-30!165;CL:0000738!2.14e-30!140;CL:0000988!2.63e-30!182;CL:0002087!1.04e-29!119;CL:0002031!5.64e-27!124;CL:0000542!2.39e-23!53;CL:0000051!2.39e-23!53;CL:0000838!2.48e-23!52;CL:0000791!1.61e-13!18;CL:0000789!1.61e-13!18;CL:0002420!1.61e-13!18;CL:0002419!1.61e-13!18;CL:0000790!1.61e-13!18;CL:0000084!8.79e-13!25;CL:0000827!8.79e-13!25;CL:0000763!1.18e-10!112;CL:0000049!1.18e-10!112;CL:0000766!3.08e-10!76;CL:0000945!9.20e-10!24;CL:0000826!9.20e-10!24;CL:0000625!6.28e-09!11;CL:0000236!3.42e-08!14;CL:0000839!6.51e-08!70;CL:0000557!7.68e-08!71;CL:0002194!1.20e-07!63;CL:0000576!1.20e-07!63;CL:0000040!1.20e-07!63;CL:0000559!1.20e-07!63;CL:0002009!3.47e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.41e-24;18!CL:0000789;3.41e-24;18!CL:0002419;3.41e-24;18!CL:0000084;3.65e-19;25!CL:0000542;2.62e-17;53!CL:0000625;1.63e-15;11!CL:0000236;4.16e-11;13!CL:0000624;4.15e-09;6!CL:0000945;9.12e-09;24!CL:0002087;3.79e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.17e-31,168;CL:0000738,1.45e-30,136;CL:0000838,3.00e-30,52;CL:0002032,7.63e-30,161;CL:0000837,7.63e-30,161;CL:0002087,7.73e-30,115;CL:0000542,2.09e-29,53;CL:0000051,2.09e-29,53;CL:0000988,5.47e-29,177;CL:0002031,8.35e-26,120;CL:0000791,3.89e-24,18;CL:0000789,3.89e-24,18;CL:0002420,3.89e-24,18;CL:0002419,3.89e-24,18;CL:0000790,3.89e-24,18;CL:0000084,2.83e-19,25;CL:0000827,2.83e-19,25;CL:0000625,1.84e-15,11;CL:0000236,1.41e-12,14;CL:0000945,2.34e-09,24;CL:0000826,2.34e-09,24;CL:0000624,3.71e-09,6;CL:0000763,9.96e-08,108;CL:0000049,9.96e-08,108;CL:0000766,2.95e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;3.41e-24;18!CL:0000051;2.62e-17;53 | |||
|ontology_enrichment_disease=DOID:2531!2.66e-08!51;DOID:0060083!2.66e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-12!102;UBERON:0003061!1.76e-12!102;UBERON:0002193!2.59e-11!112;UBERON:0007023!3.03e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.82e-10;15!UBERON:0000179;7.82e-10;15!UBERON:0000463;7.82e-10;15!UBERON:0004177;6.14e-07;5!UBERON:0005057;6.14e-07;5!UBERON:0002390;7.38e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-11,98;UBERON:0003061,2.20e-11,98;UBERON:0002193,8.14e-11,108;UBERON:0000178,8.09e-10,15;UBERON:0000179,8.09e-10,15;UBERON:0000463,8.09e-10,15;UBERON:0004177,2.45e-09,7;UBERON:0005057,2.45e-09,7 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.753255837568817,0.916960868975415,1.23150884174919,0.708397031823113,4.32700704533794,1.53531759238885,3.56077083626975,0,0.90361775633475,0,2.63388481973026,0.995184627411951,0.587200878669695,4.9859586767869,4.01088894940283,3.47217393145363,0.895661896959697,3.56283032620878,0.77272670290256,0.726991193897824,0.755751887377619,0.485168122375632,0.929716147622738,0,0.929119112685311,0.575384784644301,1.2808035326455,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,1.12945403725563,0.545812300115692,0.449446968890169,0.612167784741805,0,0,1.31940520074686,0.199463657621632,0.426224750532694,0.290209238628584,0,0,1.7587406567972,1.0429658368404,0,0,0.736555271975129,0.316462387440884,0.633765858935825,2.55125159958052,2.30624510059213,0.786300418025466,1.65194582125657,0.64290234678832,1.71007646244749,1.79025009479181,0.91332076882317,3.51992488922645,1.63841583378639,2.66852776159066,1.70692089026603,4.80475184443215,1.72425731986345,1.98313461835459,4.77026877267682,3.41527781465669,1.76171156811282,0.764546456250458,0,0,0.790152254325231,9.24535919535015,5.10913991573914,7.81285696198135,5.85152733867373,6.19252306603822,4.73447805734733,1.94826728407911,4.2335973616366,2.65145316727353,4.87374568083967,5.68688113906533,5.12365278902701,4.03183977435623,3.61763390128087,3.31620021343018,4.92665245749589,4.74517002118593,5.35081656179426,5.22677619024884,4.41906436520508,4.98186641682498,3.09264700934367,2.53019692019503,7.00843911513013,4.55758417699493,4.75226022224187,2.40920190524436,3.58362511232371,8.74515085866421,7.34009481336452,7.39015197228942,8.46748321543876,8.82552646085574,7.24122019413995,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.378139268656271,0.221729397462564,0.351339142772504,1.63723844372141,0.364295288292542,0,1.9472843619281,1.0447784237956,1.32957960518865,1.90792499444274,0.571994910780128,0,0.39752481473341,0,1.38856200643038,0,0.419499436209906,0.275118041940067,1.25396979922086,0,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0.337834441449967,1.53316637465883,0,0.183201743930407,2.63560834872127,0,0.872188104285069,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0,0.302714855289863,0,0.234321431833797,0.312160076830321,1.1409436430889,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,1.14721838155602,0.975789649036763,0.795178609928912,0.813357600086629,0.932949495138334,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0.579652024875384,0,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0.492434012174795,0,1.18904929830983,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0.829312462163088,1.58531948758658,1.00993946741104,0.761974731506028,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0.336393253036082,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0,0,0,4.03506518376698,8.6693534488848,8.40947541952118,7.9572682493444,0,0,0,0.167516265334349,0,4.49404214368309,0,2.48649308061621,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.02943027143257,8.2707210449155,3.66714141391649,6.61710858381355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0.368323955743585,0,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.206082023295445,0,0,0.574265537996172,1.30012049207304,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.576570202095319,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0.564862804660675,0,0,0.443430153536676,0,5.07447609232169,0,3.98753031021914,5.47933083552915,2.87953591160336,4.53931317834902,4.32025149790492,7.9312517629427,0.320472213382419,2.88743956579008,0,0.557409525377156,2.8853842595289,2.48996451719449,0.956557636372934,1.59663497146253,1.1490322207942,1.2700414963433,0,1.40398589056729,0.456469358066384,2.6635582281414,0,3.04725200042886,0.963528450622197,0.605399121573143,0.851692475380653,0.687010689511529,0.614481528616916,1.3420566473545,1.33479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| ||
|short_description=p11@RNF44 | |short_description=p11@RNF44 | ||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p11@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNF44_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -257bp_to_ENST00000509404_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.17e-31 | 168 |
leukocyte | 1.45e-30 | 136 |
lymphoid lineage restricted progenitor cell | 3.00e-30 | 52 |
hematopoietic oligopotent progenitor cell | 7.63e-30 | 161 |
hematopoietic multipotent progenitor cell | 7.63e-30 | 161 |
nongranular leukocyte | 7.73e-30 | 115 |
lymphocyte | 2.09e-29 | 53 |
common lymphoid progenitor | 2.09e-29 | 53 |
hematopoietic cell | 5.47e-29 | 177 |
hematopoietic lineage restricted progenitor cell | 8.35e-26 | 120 |
mature alpha-beta T cell | 3.89e-24 | 18 |
alpha-beta T cell | 3.89e-24 | 18 |
immature T cell | 3.89e-24 | 18 |
mature T cell | 3.89e-24 | 18 |
immature alpha-beta T cell | 3.89e-24 | 18 |
T cell | 2.83e-19 | 25 |
pro-T cell | 2.83e-19 | 25 |
CD8-positive, alpha-beta T cell | 1.84e-15 | 11 |
B cell | 1.41e-12 | 14 |
lymphocyte of B lineage | 2.34e-09 | 24 |
pro-B cell | 2.34e-09 | 24 |
CD4-positive, alpha-beta T cell | 3.71e-09 | 6 |
myeloid cell | 9.96e-08 | 108 |
common myeloid progenitor | 9.96e-08 | 108 |
myeloid leukocyte | 2.95e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-11 | 98 |
blood island | 2.20e-11 | 98 |
hemolymphoid system | 8.14e-11 | 108 |
blood | 8.09e-10 | 15 |
haemolymphatic fluid | 8.09e-10 | 15 |
organism substance | 8.09e-10 | 15 |
hemopoietic organ | 2.45e-09 | 7 |
immune organ | 2.45e-09 | 7 |