FFCP PHASE1:Hg19::chr7:150554885..150554903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000480582_5end | |association_with_transcript=-117bp_to_ENST00000480582_5end | ||
|cluster_id=chr7:150554885..150554903,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_8_at_ABP1_5end | |description=CAGE_peak_8_at_ABP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!9.59e-26!3;CL:0000453!2.15e-15!5;CL:0000313!3.25e-09!1;CL:0000990!8.83e-09!8;CL:0000451!2.89e-07!10 | |ontology_enrichment_celltype=CL:0002541!9.59e-26!3;CL:0000453!2.15e-15!5;CL:0000313!3.25e-09!1;CL:0000990!8.83e-09!8;CL:0000451!2.89e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.78e-67;3!CL:0000453;1.69e-18;5!CL:0000349;3.25e-11;19!CL:0000990;9.93e-11;8!CL:0000451;5.98e-09;10!CL:0000775;1.21e-08;3 | |ontology_enrichment_celltype_v019=CL:0002541;8.78e-67;3!CL:0000453;1.69e-18;5!CL:0000349;3.25e-11;19!CL:0000990;9.93e-11;8!CL:0000451;5.98e-09;10!CL:0000775;1.21e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.82e-67,3;CL:0000453,1.77e-18,5;CL:0000349,3.31e-11,19;CL:0000990,1.02e-10,8;CL:0000451,6.10e-09,10;CL:0000775,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.13e-23;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.13e-23;1 | ||
|ontology_enrichment_disease=DOID:2152!3.25e-09!1 | |ontology_enrichment_disease=DOID:2152!3.25e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!9.59e-26!3;UBERON:0000920!9.59e-26!3;UBERON:0003124!2.63e-19!7;UBERON:0005631!1.17e-14!14;UBERON:0000158!1.17e-14!14;UBERON:0004911!3.25e-09!1;UBERON:0000478!1.79e-08!24 | |ontology_enrichment_uberon=UBERON:0000476!9.59e-26!3;UBERON:0000920!9.59e-26!3;UBERON:0003124!2.63e-19!7;UBERON:0005631!1.17e-14!14;UBERON:0000158!1.17e-14!14;UBERON:0004911!3.25e-09!1;UBERON:0000478!1.79e-08!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.78e-67;3!UBERON:0000920;8.78e-67;3!UBERON:0005631;1.16e-20;10!UBERON:0000158;1.16e-20;10!UBERON:0000478;3.75e-15;24!UBERON:0001987;9.63e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;8.78e-67;3!UBERON:0000920;8.78e-67;3!UBERON:0005631;1.16e-20;10!UBERON:0000158;1.16e-20;10!UBERON:0000478;3.75e-15;24!UBERON:0001987;9.63e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.82e-67,3;UBERON:0003124,1.32e-50,7;UBERON:0005631,1.27e-25,14;UBERON:0000158,1.27e-25,14;UBERON:0000478,3.68e-15,24;UBERON:0001987,9.11e-07,4;UBERON:0004340,9.11e-07,4 | |||
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|short_description=p8@ABP1 | |short_description=p8@ABP1 | ||
}} | }} |
Latest revision as of 04:25, 17 September 2015
Short description: | p8@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -117bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.82e-67 | 3 |
Langerhans cell | 1.77e-18 | 5 |
extraembryonic cell | 3.31e-11 | 19 |
conventional dendritic cell | 1.02e-10 | 8 |
dendritic cell | 6.10e-09 | 10 |
neutrophil | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.82e-67 | 3 |
chorion | 1.32e-50 | 7 |
extraembryonic membrane | 1.27e-25 | 14 |
membranous layer | 1.27e-25 | 14 |
extraembryonic structure | 3.68e-15 | 24 |
placenta | 9.11e-07 | 4 |
allantois | 9.11e-07 | 4 |