FFCP PHASE1:Hg19::chr7:150554784..150554792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-228bp_to_ENST00000480582_5end | |association_with_transcript=-228bp_to_ENST00000480582_5end | ||
|cluster_id=chr7:150554784..150554792,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_13_at_ABP1_5end | |description=CAGE_peak_13_at_ABP1_5end | ||
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|ontology_enrichment_celltype=CL:0002541!7.04e-35!3;CL:0000453!6.82e-21!5;CL:0000990!7.03e-12!8;CL:0000451!8.10e-10!10 | |ontology_enrichment_celltype=CL:0002541!7.04e-35!3;CL:0000453!6.82e-21!5;CL:0000990!7.03e-12!8;CL:0000451!8.10e-10!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.72e-99;3!CL:0000453;3.55e-27;5!CL:0000349;1.89e-16;19!CL:0000990;1.31e-15;8!CL:0000451;5.76e-13;10 | |ontology_enrichment_celltype_v019=CL:0002541;6.72e-99;3!CL:0000453;3.55e-27;5!CL:0000349;1.89e-16;19!CL:0000990;1.31e-15;8!CL:0000451;5.76e-13;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.06e-99,3;CL:0000453,3.55e-27,5;CL:0000349,1.75e-16,19;CL:0000990,1.31e-15,8;CL:0000451,5.76e-13,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!7.04e-35!3;UBERON:0000920!7.04e-35!3;UBERON:0003124!3.55e-26!7;UBERON:0005631!4.82e-20!14;UBERON:0000158!4.82e-20!14;UBERON:0000478!1.13e-11!24 | |ontology_enrichment_uberon=UBERON:0000476!7.04e-35!3;UBERON:0000920!7.04e-35!3;UBERON:0003124!3.55e-26!7;UBERON:0005631!4.82e-20!14;UBERON:0000158!4.82e-20!14;UBERON:0000478!1.13e-11!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.72e-99;3!UBERON:0000920;6.72e-99;3!UBERON:0005631;1.96e-30;10!UBERON:0000158;1.96e-30;10!UBERON:0000478;3.41e-13;24!UBERON:0002108;6.78e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;6.72e-99;3!UBERON:0000920;6.72e-99;3!UBERON:0005631;1.96e-30;10!UBERON:0000158;1.96e-30;10!UBERON:0000478;3.41e-13;24!UBERON:0002108;6.78e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.06e-99,3;UBERON:0003124,3.92e-43,7;UBERON:0005631,4.67e-22,14;UBERON:0000158,4.67e-22,14;UBERON:0000478,3.20e-13,24;UBERON:0002108,7.49e-08,4 | |||
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|short_description=p13@ABP1 | |short_description=p13@ABP1 | ||
}} | }} |
Latest revision as of 04:24, 17 September 2015
Short description: | p13@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -228bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.06e-99 | 3 |
Langerhans cell | 3.55e-27 | 5 |
extraembryonic cell | 1.75e-16 | 19 |
conventional dendritic cell | 1.31e-15 | 8 |
dendritic cell | 5.76e-13 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.06e-99 | 3 |
chorion | 3.92e-43 | 7 |
extraembryonic membrane | 4.67e-22 | 14 |
membranous layer | 4.67e-22 | 14 |
extraembryonic structure | 3.20e-13 | 24 |
small intestine | 7.49e-08 | 4 |