FFCP PHASE1:Hg19::chr8:1711963..1711989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2055 | |EntrezGene=2055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2079 | |HGNC=2079 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000520991_5end | |association_with_transcript=0bp_to_ENST00000520991_5end | ||
|cluster_id=chr8:1711963..1711989,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_CLN8_5end | |description=CAGE_peak_2_at_CLN8_5end | ||
|id=chr8:1711963..1711989,+ | |id=chr8:1711963..1711989,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.86e-28!70;CL:0000557!1.18e-27!71;CL:0002009!2.82e-27!65;CL:0000766!6.12e-27!76;CL:0002194!3.63e-26!63;CL:0000576!3.63e-26!63;CL:0000040!3.63e-26!63;CL:0000559!3.63e-26!63;CL:0002057!2.72e-25!42;CL:0000860!7.91e-22!45;CL:0000763!3.79e-12!112;CL:0000049!3.79e-12!112;CL:0002031!1.95e-07!124;CL:0000738!6.69e-07!140 | |ontology_enrichment_celltype=CL:0000839!1.86e-28!70;CL:0000557!1.18e-27!71;CL:0002009!2.82e-27!65;CL:0000766!6.12e-27!76;CL:0002194!3.63e-26!63;CL:0000576!3.63e-26!63;CL:0000040!3.63e-26!63;CL:0000559!3.63e-26!63;CL:0002057!2.72e-25!42;CL:0000860!7.91e-22!45;CL:0000763!3.79e-12!112;CL:0000049!3.79e-12!112;CL:0002031!1.95e-07!124;CL:0000738!6.69e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-20;33!CL:0002057;2.67e-20;33!CL:0000473;4.93e-20;39!CL:0000234;4.93e-20;39!CL:0000576;4.88e-16;48!CL:0000766;8.13e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.52e-32,66;CL:0000557,2.93e-31,67;CL:0002009,4.36e-31,61;CL:0000766,1.82e-30,72;CL:0002194,6.03e-30,59;CL:0000576,6.03e-30,59;CL:0000040,6.03e-30,59;CL:0000559,6.03e-30,59;CL:0000473,5.83e-29,48;CL:0000234,5.83e-29,48;CL:0000860,1.98e-25,42;CL:0002057,1.98e-25,42;CL:0000763,1.06e-13,108;CL:0000049,1.06e-13,108;CL:0002031,1.45e-08,120;CL:0000738,6.32e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.73e-23!80;UBERON:0002405!5.61e-21!115;UBERON:0001474!1.29e-19!86;UBERON:0002193!3.18e-17!112;UBERON:0003081!1.85e-16!216;UBERON:0002390!1.95e-16!102;UBERON:0003061!1.95e-16!102;UBERON:0004765!4.47e-14!101;UBERON:0001434!4.47e-14!101;UBERON:0000468!5.49e-14!659;UBERON:0007023!5.27e-12!115;UBERON:0000467!1.06e-11!625;UBERON:0000480!1.76e-11!626;UBERON:0000922!3.37e-11!612;UBERON:0000062!7.14e-11!511;UBERON:0002050!1.99e-10!605;UBERON:0005423!1.99e-10!605;UBERON:0000923!2.61e-10!604;UBERON:0005291!2.61e-10!604;UBERON:0006598!2.61e-10!604;UBERON:0002532!2.61e-10!604;UBERON:0001049!8.70e-10!57;UBERON:0005068!8.70e-10!57;UBERON:0006241!8.70e-10!57;UBERON:0007135!8.70e-10!57;UBERON:0001017!4.69e-09!82;UBERON:0002616!2.31e-08!59;UBERON:0000955!4.08e-08!69;UBERON:0006238!4.08e-08!69;UBERON:0005743!7.81e-08!86;UBERON:0000025!1.22e-07!194;UBERON:0002204!2.18e-07!167;UBERON:0004111!2.41e-07!241;UBERON:0003080!3.25e-07!42;UBERON:0002780!4.18e-07!41;UBERON:0001890!4.18e-07!41;UBERON:0006240!4.18e-07!41 | |ontology_enrichment_uberon=UBERON:0002371!7.73e-23!80;UBERON:0002405!5.61e-21!115;UBERON:0001474!1.29e-19!86;UBERON:0002193!3.18e-17!112;UBERON:0003081!1.85e-16!216;UBERON:0002390!1.95e-16!102;UBERON:0003061!1.95e-16!102;UBERON:0004765!4.47e-14!101;UBERON:0001434!4.47e-14!101;UBERON:0000468!5.49e-14!659;UBERON:0007023!5.27e-12!115;UBERON:0000467!1.06e-11!625;UBERON:0000480!1.76e-11!626;UBERON:0000922!3.37e-11!612;UBERON:0000062!7.14e-11!511;UBERON:0002050!1.99e-10!605;UBERON:0005423!1.99e-10!605;UBERON:0000923!2.61e-10!604;UBERON:0005291!2.61e-10!604;UBERON:0006598!2.61e-10!604;UBERON:0002532!2.61e-10!604;UBERON:0001049!8.70e-10!57;UBERON:0005068!8.70e-10!57;UBERON:0006241!8.70e-10!57;UBERON:0007135!8.70e-10!57;UBERON:0001017!4.69e-09!82;UBERON:0002616!2.31e-08!59;UBERON:0000955!4.08e-08!69;UBERON:0006238!4.08e-08!69;UBERON:0005743!7.81e-08!86;UBERON:0000025!1.22e-07!194;UBERON:0002204!2.18e-07!167;UBERON:0004111!2.41e-07!241;UBERON:0003080!3.25e-07!42;UBERON:0002780!4.18e-07!41;UBERON:0001890!4.18e-07!41;UBERON:0006240!4.18e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@CLN8 | |short_description=p2@CLN8 | ||
}} | }} |
Latest revision as of 04:23, 17 September 2015
Short description: | p2@CLN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLN8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000520991_5end |
EntrezGene: | CLN8 |
HGNC: | 2079 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.52e-32 | 66 |
granulocyte monocyte progenitor cell | 2.93e-31 | 67 |
macrophage dendritic cell progenitor | 4.36e-31 | 61 |
myeloid leukocyte | 1.82e-30 | 72 |
monopoietic cell | 6.03e-30 | 59 |
monocyte | 6.03e-30 | 59 |
monoblast | 6.03e-30 | 59 |
promonocyte | 6.03e-30 | 59 |
defensive cell | 5.83e-29 | 48 |
phagocyte | 5.83e-29 | 48 |
classical monocyte | 1.98e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.98e-25 | 42 |
myeloid cell | 1.06e-13 | 108 |
common myeloid progenitor | 1.06e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.45e-08 | 120 |
leukocyte | 6.32e-08 | 136 |