FFCP PHASE1:Hg19::chr7:150553676..150553686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_CU680774,JF432306_5end | |association_with_transcript=117bp_to_CU680774,JF432306_5end | ||
|cluster_id=chr7:150553676..150553686,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_12_at_ABP1_5end | |description=CAGE_peak_12_at_ABP1_5end | ||
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|ontology_enrichment_celltype=CL:0002541!2.40e-31!3;CL:0000453!4.68e-19!5;CL:0000313!5.43e-11!1;CL:0000990!7.64e-11!8;CL:0000451!5.79e-09!10 | |ontology_enrichment_celltype=CL:0002541!2.40e-31!3;CL:0000453!4.68e-19!5;CL:0000313!5.43e-11!1;CL:0000990!7.64e-11!8;CL:0000451!5.79e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.43e-74;3!CL:0000453;8.55e-45;5!CL:0000990;2.68e-25;8!CL:0000451;7.49e-21;10!CL:0000349;1.88e-12;19 | |ontology_enrichment_celltype_v019=CL:0002541;2.43e-74;3!CL:0000453;8.55e-45;5!CL:0000990;2.68e-25;8!CL:0000451;7.49e-21;10!CL:0000349;1.88e-12;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.75e-74,3;CL:0000453,6.33e-45,5;CL:0000990,2.27e-25,8;CL:0000451,6.54e-21,10;CL:0000349,1.91e-12,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!5.43e-11!1 | |ontology_enrichment_disease=DOID:2152!5.43e-11!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.40e-31!3;UBERON:0000920!2.40e-31!3;UBERON:0003124!1.42e-23!7;UBERON:0005631!4.46e-18!14;UBERON:0000158!4.46e-18!14;UBERON:0001154!2.96e-11!1;UBERON:0001153!2.96e-11!1;UBERON:0004911!5.43e-11!1;UBERON:0000478!1.67e-10!24 | |ontology_enrichment_uberon=UBERON:0000476!2.40e-31!3;UBERON:0000920!2.40e-31!3;UBERON:0003124!1.42e-23!7;UBERON:0005631!4.46e-18!14;UBERON:0000158!4.46e-18!14;UBERON:0001154!2.96e-11!1;UBERON:0001153!2.96e-11!1;UBERON:0004911!5.43e-11!1;UBERON:0000478!1.67e-10!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.43e-74;3!UBERON:0000920;2.43e-74;3!UBERON:0005631;5.74e-23;10!UBERON:0000158;5.74e-23;10!UBERON:0000478;5.31e-10;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.43e-74;3!UBERON:0000920;2.43e-74;3!UBERON:0005631;5.74e-23;10!UBERON:0000158;5.74e-23;10!UBERON:0000478;5.31e-10;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.75e-74,3;UBERON:0003124,2.08e-32,7;UBERON:0005631,1.26e-16,14;UBERON:0000158,1.26e-16,14;UBERON:0000478,5.40e-10,24 | |||
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|short_description=p12@ABP1 | |short_description=p12@ABP1 | ||
}} | }} |
Latest revision as of 04:22, 17 September 2015
Short description: | p12@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 117bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.75e-74 | 3 |
Langerhans cell | 6.33e-45 | 5 |
conventional dendritic cell | 2.27e-25 | 8 |
dendritic cell | 6.54e-21 | 10 |
extraembryonic cell | 1.91e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.75e-74 | 3 |
chorion | 2.08e-32 | 7 |
extraembryonic membrane | 1.26e-16 | 14 |
membranous layer | 1.26e-16 | 14 |
extraembryonic structure | 5.40e-10 | 24 |