FFCP PHASE1:Hg19::chr17:7080851..7080863,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7080851..7080863,-
|short_description=p7@ASGR1
|description=CAGE_peak_7_at_ASGR1_5end
|association_with_transcript=-456bp_to_uc010clx.1_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=432 | |EntrezGene=432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |HGNC=742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-456bp_to_uc010clx.1_5end | |||
|cluster_id=chr17:7080851..7080863,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_7_at_ASGR1_5end | |||
|id=chr17:7080851..7080863,- | |||
|ontology_enrichment_celltype=CL:0000540!1.60e-10!6;CL:0000031!1.60e-10!6;CL:0000404!1.60e-10!6;CL:0000047!8.78e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.08e-12;6!CL:0000404;7.08e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.91e-12,6;CL:0000031,7.91e-12,6;CL:0000404,7.91e-12,6;CL:0000047,4.19e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;7.08e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.02e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.02e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.33e-43!82;UBERON:0005743!1.97e-42!86;UBERON:0000073!1.82e-41!94;UBERON:0001016!1.82e-41!94;UBERON:0000955!4.02e-37!69;UBERON:0006238!4.02e-37!69;UBERON:0001049!7.76e-37!57;UBERON:0005068!7.76e-37!57;UBERON:0006241!7.76e-37!57;UBERON:0007135!7.76e-37!57;UBERON:0002616!2.73e-35!59;UBERON:0002619!1.18e-33!22;UBERON:0001950!2.67e-33!20;UBERON:0002780!1.67e-32!41;UBERON:0001890!1.67e-32!41;UBERON:0006240!1.67e-32!41;UBERON:0002346!1.88e-32!90;UBERON:0003080!1.42e-31!42;UBERON:0001893!8.90e-31!34;UBERON:0002020!1.54e-30!34;UBERON:0003528!1.54e-30!34;UBERON:0001869!3.85e-30!32;UBERON:0000956!3.76e-29!25;UBERON:0000203!3.76e-29!25;UBERON:0002791!7.46e-29!33;UBERON:0003075!2.55e-28!86;UBERON:0007284!2.55e-28!86;UBERON:0000924!3.17e-23!173;UBERON:0006601!3.17e-23!173;UBERON:0003056!3.57e-23!61;UBERON:0004121!3.09e-20!169;UBERON:0000033!3.99e-19!123;UBERON:0007023!1.14e-18!115;UBERON:0000153!8.98e-18!129;UBERON:0007811!8.98e-18!129;UBERON:0002021!9.93e-14!5;UBERON:0001871!9.27e-12!7;UBERON:0000200!4.03e-11!6;UBERON:0001872!5.60e-09!5;UBERON:0004733!7.10e-09!12;UBERON:0002028!7.10e-09!12;UBERON:0007277!7.10e-09!12;UBERON:0002771!7.72e-09!3;UBERON:0000025!1.06e-08!194;UBERON:0004732!4.13e-08!13;UBERON:0000988!1.98e-07!3;UBERON:0002298!4.62e-07!8;UBERON:0003076!6.86e-07!15;UBERON:0003057!6.86e-07!15;UBERON:0004111!8.98e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.67e-28;20!UBERON:0002619;1.54e-25;22!UBERON:0000956;1.38e-22;25!UBERON:0000203;1.38e-22;25!UBERON:0002346;6.79e-18;4!UBERON:0000923;6.79e-18;4!UBERON:0010316;6.79e-18;4!UBERON:0005291;6.79e-18;4!UBERON:0002791;6.82e-17;32!UBERON:0001869;1.14e-16;32!UBERON:0001893;1.31e-15;34!UBERON:0002050;1.61e-14;5!UBERON:0005423;1.61e-14;5!UBERON:0003528;3.08e-14;34!UBERON:0002020;3.08e-14;34!UBERON:0002021;3.25e-14;5!UBERON:0000922;3.90e-14;49!UBERON:0000200;7.08e-12;6!UBERON:0001871;2.58e-10;6!UBERON:0002780;6.55e-10;41!UBERON:0001890;6.55e-10;41!UBERON:0002771;1.64e-09;2!UBERON:0002702;1.64e-09;2!UBERON:0000955;1.46e-08;68!UBERON:0000073;6.76e-07;53!UBERON:0002616;6.76e-07;53!UBERON:0002114;7.70e-07;2!UBERON:0001870;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.41e-28,20;UBERON:0002619,1.47e-25,22;UBERON:0000956,1.32e-22,25;UBERON:0000203,1.32e-22,25;UBERON:0002791,8.57e-18,32;UBERON:0001869,8.57e-18,32;UBERON:0003528,9.03e-17,34;UBERON:0002020,9.03e-17,34;UBERON:0001893,9.03e-17,34;UBERON:0001017,2.21e-15,81;UBERON:0002021,3.37e-14,5;UBERON:0002780,5.93e-14,41;UBERON:0001890,5.93e-14,41;UBERON:0003080,5.93e-14,41;UBERON:0006240,5.93e-14,41;UBERON:0001016,8.23e-14,89;UBERON:0000200,7.48e-12,6;UBERON:0002346,1.19e-11,86;UBERON:0000955,3.44e-11,68;UBERON:0006238,3.44e-11,68;UBERON:0000073,8.17e-11,53;UBERON:0002616,8.17e-11,53;UBERON:0004121,1.21e-10,171;UBERON:0000924,1.21e-10,171;UBERON:0006601,1.21e-10,171;UBERON:0001871,2.14e-10,6;UBERON:0001049,3.10e-10,56;UBERON:0005068,3.10e-10,56;UBERON:0006241,3.10e-10,56;UBERON:0007135,3.10e-10,56;UBERON:0002771,1.44e-09,2;UBERON:0002702,2.02e-09,2;UBERON:0003056,2.16e-09,61;UBERON:0003075,5.95e-07,82;UBERON:0007284,5.95e-07,82;UBERON:0002114,7.70e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.74214478529481,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0.886642856860642,0.87754158861589,0,0,0,0,0,0.0897576444097721,0.977826347298073,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.1267183763585,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.471797825567689,0,0,9.99102124477909,5.20530209887809,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.478901577171454,0.615349092722265,3.78107544332577,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0,0.317079050969534,3.82882366312754,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.72350050919134,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883889372481891,2.18175345170189,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.74214478529481,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0.886642856860642,0.87754158861589,0,0,0,0,0,0.0897576444097721,0.977826347298073,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.1267183763585,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.471797825567689,0,0,9.99102124477909,5.20530209887809,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.478901577171454,0.615349092722265,3.78107544332577,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0,0.317079050969534,3.82882366312754,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.72350050919134,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883889372481891,2.18175345170189,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p7@ASGR1 | |||
}} | }} |
Latest revision as of 04:17, 17 September 2015
Short description: | p7@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ASGR1_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -456bp_to_uc010clx.1_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.91e-12 | 6 |
neuroblast | 7.91e-12 | 6 |
electrically signaling cell | 7.91e-12 | 6 |
neuronal stem cell | 4.19e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.41e-28 | 20 |
regional part of cerebral cortex | 1.47e-25 | 22 |
cerebral cortex | 1.32e-22 | 25 |
pallium | 1.32e-22 | 25 |
regional part of telencephalon | 8.57e-18 | 32 |
cerebral hemisphere | 8.57e-18 | 32 |
brain grey matter | 9.03e-17 | 34 |
gray matter | 9.03e-17 | 34 |
telencephalon | 9.03e-17 | 34 |
central nervous system | 2.21e-15 | 81 |
occipital lobe | 3.37e-14 | 5 |
regional part of forebrain | 5.93e-14 | 41 |
forebrain | 5.93e-14 | 41 |
anterior neural tube | 5.93e-14 | 41 |
future forebrain | 5.93e-14 | 41 |
nervous system | 8.23e-14 | 89 |
gyrus | 7.48e-12 | 6 |
neurectoderm | 1.19e-11 | 86 |
brain | 3.44e-11 | 68 |
future brain | 3.44e-11 | 68 |
regional part of nervous system | 8.17e-11 | 53 |
regional part of brain | 8.17e-11 | 53 |
ectoderm-derived structure | 1.21e-10 | 171 |
ectoderm | 1.21e-10 | 171 |
presumptive ectoderm | 1.21e-10 | 171 |
temporal lobe | 2.14e-10 | 6 |
neural tube | 3.10e-10 | 56 |
neural rod | 3.10e-10 | 56 |
future spinal cord | 3.10e-10 | 56 |
neural keel | 3.10e-10 | 56 |
middle temporal gyrus | 1.44e-09 | 2 |
middle frontal gyrus | 2.02e-09 | 2 |
pre-chordal neural plate | 2.16e-09 | 61 |
neural plate | 5.95e-07 | 82 |
presumptive neural plate | 5.95e-07 | 82 |
duodenum | 7.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.02e-07 | 10 |