FFCP PHASE1:Hg19::chr17:7080802..7080850,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7080802..7080850,-
|short_description=p2@ASGR1
|description=CAGE_peak_2_at_ASGR1_5end
|association_with_transcript=-407bp_to_uc010clx.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=432 | |EntrezGene=432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |HGNC=742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-407bp_to_uc010clx.1_5end | |||
|cluster_id=chr17:7080802..7080850,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_2_at_ASGR1_5end | |||
|id=chr17:7080802..7080850,- | |||
|ontology_enrichment_celltype=CL:0000047!1.00e-12!8;CL:0000540!3.78e-10!6;CL:0000031!3.78e-10!6;CL:0000404!3.78e-10!6;CL:0002319!1.26e-08!25;CL:0002322!6.68e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.33e-22;6!CL:0000404;2.33e-22;6!CL:0002319;1.74e-09;25!CL:0000047;3.75e-08;2!CL:0002322;5.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.17e-28,8;CL:0000540,2.18e-22,6;CL:0000031,2.18e-22,6;CL:0000404,2.18e-22,6;CL:0002319,1.83e-09,25;CL:0000133,2.53e-07,59;CL:0002322,5.42e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.33e-22;6!UBERON:0006601;3.48e-09;82 | |||
|ontology_enrichment_disease=DOID:171!1.30e-08!10;DOID:3095!7.04e-07!22;DOID:2994!7.04e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.95e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.29e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.43e-48!82;UBERON:0000073!2.81e-45!94;UBERON:0001016!2.81e-45!94;UBERON:0005743!1.24e-44!86;UBERON:0001049!2.30e-40!57;UBERON:0005068!2.30e-40!57;UBERON:0006241!2.30e-40!57;UBERON:0007135!2.30e-40!57;UBERON:0001893!5.75e-37!34;UBERON:0002020!5.98e-37!34;UBERON:0003528!5.98e-37!34;UBERON:0002791!1.06e-35!33;UBERON:0001869!3.65e-35!32;UBERON:0000955!8.96e-34!69;UBERON:0006238!8.96e-34!69;UBERON:0002780!4.27e-33!41;UBERON:0001890!4.27e-33!41;UBERON:0006240!4.27e-33!41;UBERON:0002616!1.71e-32!59;UBERON:0000956!2.50e-32!25;UBERON:0000203!2.50e-32!25;UBERON:0003080!4.84e-32!42;UBERON:0002346!2.22e-31!90;UBERON:0002619!2.33e-29!22;UBERON:0003075!3.53e-27!86;UBERON:0007284!3.53e-27!86;UBERON:0001950!6.44e-27!20;UBERON:0000924!1.81e-26!173;UBERON:0006601!1.81e-26!173;UBERON:0004121!3.37e-23!169;UBERON:0003056!1.74e-21!61;UBERON:0000033!1.15e-16!123;UBERON:0000153!4.11e-16!129;UBERON:0007811!4.11e-16!129;UBERON:0007023!8.77e-14!115;UBERON:0000025!4.21e-13!194;UBERON:0000200!1.24e-09!6;UBERON:0001871!1.53e-09!7;UBERON:0004111!1.93e-09!241;UBERON:0003076!2.13e-09!15;UBERON:0003057!2.13e-09!15;UBERON:0000483!1.63e-08!309;UBERON:0001872!1.78e-08!5;UBERON:0002021!2.26e-08!5;UBERON:0000119!3.00e-08!312;UBERON:0000477!8.29e-08!286;UBERON:0000349!1.18e-07!5;UBERON:0000922!1.19e-07!612;UBERON:0002420!5.77e-07!9;UBERON:0007245!5.77e-07!9;UBERON:0010009!5.77e-07!9;UBERON:0010011!5.77e-07!9;UBERON:0000454!5.77e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.21e-52;22!UBERON:0001950;6.85e-52;20!UBERON:0000956;8.98e-46;25!UBERON:0000203;8.98e-46;25!UBERON:0001869;1.26e-38;32!UBERON:0001893;1.07e-35;34!UBERON:0002791;1.41e-34;32!UBERON:0003528;4.22e-32;34!UBERON:0002020;4.22e-32;34!UBERON:0002780;3.76e-23;41!UBERON:0001890;3.76e-23;41!UBERON:0000200;6.94e-21;6!UBERON:0001872;3.75e-18;5!UBERON:0000955;1.19e-16;68!UBERON:0001016;6.35e-16;83!UBERON:0000073;2.32e-15;53!UBERON:0002616;2.32e-15;53!UBERON:0001017;3.85e-15;75!UBERON:0001871;5.85e-13;6!UBERON:0002021;2.64e-12;5!UBERON:0000922;1.30e-11;49!UBERON:0001870;2.24e-11;3!UBERON:0002346;2.61e-09;4!UBERON:0000923;2.61e-09;4!UBERON:0010316;2.61e-09;4!UBERON:0005291;2.61e-09;4!UBERON:0002702;2.75e-08;2!UBERON:0002771;3.75e-08;2!UBERON:0002050;1.61e-07;5!UBERON:0005423;1.61e-07;5!UBERON:0011216;4.44e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.14e-53,22;UBERON:0001950,2.39e-52,20;UBERON:0001017,4.69e-49,81;UBERON:0001016,5.28e-49,89;UBERON:0000956,3.74e-46,25;UBERON:0000203,3.74e-46,25;UBERON:0001869,1.59e-43,32;UBERON:0001893,1.00e-40,34;UBERON:0002791,1.92e-39,32;UBERON:0003528,6.81e-37,34;UBERON:0002020,6.81e-37,34;UBERON:0002780,4.97e-33,41;UBERON:0001890,4.97e-33,41;UBERON:0003080,4.97e-33,41;UBERON:0006240,4.97e-33,41;UBERON:0000955,6.76e-29,68;UBERON:0006238,6.76e-29,68;UBERON:0001049,3.19e-28,56;UBERON:0005068,3.19e-28,56;UBERON:0006241,3.19e-28,56;UBERON:0007135,3.19e-28,56;UBERON:0000073,3.16e-27,53;UBERON:0002616,3.16e-27,53;UBERON:0004121,3.13e-26,171;UBERON:0000924,3.13e-26,171;UBERON:0006601,3.13e-26,171;UBERON:0002346,5.72e-24,86;UBERON:0003056,7.61e-23,61;UBERON:0000200,3.87e-21,6;UBERON:0003075,2.60e-19,82;UBERON:0007284,2.60e-19,82;UBERON:0001872,2.48e-18,5;UBERON:0011216,8.43e-18,223;UBERON:0010371,5.10e-14,104;UBERON:0010314,3.36e-13,132;UBERON:0001871,4.22e-13,6;UBERON:0002021,2.85e-12,5;UBERON:0001870,2.02e-11,3;UBERON:0007023,5.84e-11,114;UBERON:0002702,2.25e-08,2;UBERON:0002771,3.13e-08,2 | |||
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| ||
|short_description=p2@ASGR1 | |||
}} | }} |
Latest revision as of 04:17, 17 September 2015
Short description: | p2@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ASGR1_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -407bp_to_uc010clx.1_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.17e-28 | 8 |
neuron | 2.18e-22 | 6 |
neuroblast | 2.18e-22 | 6 |
electrically signaling cell | 2.18e-22 | 6 |
neural cell | 1.83e-09 | 25 |
neurectodermal cell | 2.53e-07 | 59 |
embryonic stem cell | 5.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.29e-09 | 10 |