FFCP PHASE1:Hg19::chr17:7080575..7080585,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=432 | |EntrezGene=432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |HGNC=742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-180bp_to_uc010clx.1_5end | |association_with_transcript=-180bp_to_uc010clx.1_5end | ||
|cluster_id=chr17:7080575..7080585,- | |||
|description=CAGE_peak_12_at_ASGR1_5end | |description=CAGE_peak_12_at_ASGR1_5end | ||
|id=chr17:7080575..7080585,- | |id=chr17:7080575..7080585,- | ||
|ontology_enrichment_celltype=CL:0000235;1.27e-09;6 | |ontology_enrichment_celltype=CL:0000540!1.09e-10!6;CL:0000031!1.09e-10!6;CL:0000404!1.09e-10!6;CL:0000047!5.08e-08!8;CL:0002322!3.04e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;1.27e-09;6 | ||
|ontology_enrichment_disease=DOID:171;8.54e-21;10!DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |ontology_enrichment_celltype_v019_2=CL:0000235,1.32e-09,6 | ||
|ontology_enrichment_uberon=UBERON:0002346;5.14e-50;4!UBERON:0000923;5.14e-50;4!UBERON:0010316;5.14e-50;4!UBERON:0005291;5.14e-50;4!UBERON:0002050;2.71e-40;5!UBERON:0005423;2.71e-40;5!UBERON:0001876;8.10e-26;2!UBERON:0000349;3.42e-11;5!UBERON:0001871;2.26e-08;6!UBERON:0002420;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!1.32e-09!10;DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;8.54e-21;10!DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.54e-21,10;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.27e-29!22;UBERON:0001017!7.45e-29!82;UBERON:0001950!2.72e-28!20;UBERON:0000073!3.80e-28!94;UBERON:0001016!3.80e-28!94;UBERON:0001893!1.43e-27!34;UBERON:0005743!3.21e-27!86;UBERON:0001869!3.63e-26!32;UBERON:0000956!8.13e-26!25;UBERON:0000203!8.13e-26!25;UBERON:0002780!5.07e-25!41;UBERON:0001890!5.07e-25!41;UBERON:0006240!5.07e-25!41;UBERON:0002791!5.54e-25!33;UBERON:0002020!2.26e-24!34;UBERON:0003528!2.26e-24!34;UBERON:0003080!2.47e-24!42;UBERON:0000955!9.62e-23!69;UBERON:0006238!9.62e-23!69;UBERON:0001049!2.97e-21!57;UBERON:0005068!2.97e-21!57;UBERON:0006241!2.97e-21!57;UBERON:0007135!2.97e-21!57;UBERON:0002616!2.23e-20!59;UBERON:0002346!4.89e-20!90;UBERON:0003056!1.54e-17!61;UBERON:0000924!8.64e-16!173;UBERON:0006601!8.64e-16!173;UBERON:0003075!1.12e-15!86;UBERON:0007284!1.12e-15!86;UBERON:0007023!1.45e-15!115;UBERON:0004121!1.15e-12!169;UBERON:0001871!3.42e-12!7;UBERON:0000033!1.26e-11!123;UBERON:0000153!7.80e-11!129;UBERON:0007811!7.80e-11!129;UBERON:0000200!8.66e-11!6;UBERON:0001872!1.12e-07!5;UBERON:0000349!1.34e-07!5;UBERON:0002021!1.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.14e-50;4!UBERON:0000923;5.14e-50;4!UBERON:0010316;5.14e-50;4!UBERON:0005291;5.14e-50;4!UBERON:0002050;2.71e-40;5!UBERON:0005423;2.71e-40;5!UBERON:0001876;8.10e-26;2!UBERON:0000349;3.42e-11;5!UBERON:0001871;2.26e-08;6!UBERON:0002420;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,7.14e-26,2;UBERON:0000349,3.26e-11,5;UBERON:0001871,2.18e-08,6;UBERON:0002420,8.37e-07,9;UBERON:0007245,8.37e-07,9;UBERON:0010009,8.37e-07,9;UBERON:0010011,8.37e-07,9;UBERON:0000454,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,1.2754495206101,2.47871528518004,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0.252071696221718,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.443910671357348,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.526182188502793,0,0,0,0,0,0.913158720509496,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0.752122617877125,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,1.2754495206101,2.47871528518004,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0.252071696221718,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.443910671357348,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.526182188502793,0,0,0,0,0,0.913158720509496,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0.752122617877125,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@ASGR1 | |short_description=p12@ASGR1 | ||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p12@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ASGR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -180bp_to_uc010clx.1_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
amygdala | 7.14e-26 | 2 |
limbic system | 3.26e-11 | 5 |
temporal lobe | 2.18e-08 | 6 |
basal ganglion | 8.37e-07 | 9 |
nuclear complex of neuraxis | 8.37e-07 | 9 |
aggregate regional part of brain | 8.37e-07 | 9 |
collection of basal ganglia | 8.37e-07 | 9 |
cerebral subcortex | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.54e-21 | 10 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |