FFCP PHASE1:Hg19::chr12:12503128..12503141,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12503128..12503141,- to FFCP PHASE1:Hg19::chr12:12503128..12503141,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54682 | |EntrezGene=54682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25505 | |HGNC=25505 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3M3 | |UniProt=F5H3M3 | ||
|association_with_transcript=16bp_to_ENST00000355566_5end | |||
|cluster_id=chr12:12503128..12503141,- | |||
|description=CAGE_peak_2_at_MANSC1_5end | |||
|id=chr12:12503128..12503141,- | |||
|ontology_enrichment_celltype=CL:0002139!6.50e-12!24;CL:0000115!1.17e-10!35;CL:0002078!4.22e-09!44;CL:0000071!4.38e-08!18;CL:0002546!4.38e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.58e-21;24!CL:0000115;3.39e-17;36!CL:0000071;4.69e-13;18!CL:0002078;4.60e-11;45!CL:0002138;6.02e-11;6!CL:0000213;1.31e-07;58!CL:0000215;1.31e-07;58!CL:0002543;3.40e-07;6!CL:0000775;4.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.40e-22,24;CL:0000115,7.19e-22,36;CL:0002078,5.27e-16,45;CL:0000071,2.05e-13,18;CL:0002546,2.05e-13,18;CL:0000213,5.67e-12,58;CL:0000215,5.67e-12,58;CL:0005020,6.36e-11,6;CL:0002138,6.36e-11,6;CL:0005022,6.36e-11,6;CL:0002543,1.78e-07,6;CL:0000775,4.35e-07,3;CL:0000066,7.00e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;4.69e-13;18!CL:0005022;6.02e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.70e-27!115;UBERON:0004111!1.20e-19!241;UBERON:0000477!2.23e-15!286;UBERON:0000467!1.86e-12!625;UBERON:0000480!2.82e-12!626;UBERON:0000468!6.47e-12!659;UBERON:0000025!6.91e-12!194;UBERON:0000922!2.59e-10!612;UBERON:0002050!2.59e-09!605;UBERON:0005423!2.59e-09!605;UBERON:0000923!3.74e-09!604;UBERON:0005291!3.74e-09!604;UBERON:0006598!3.74e-09!604;UBERON:0002532!3.74e-09!604;UBERON:0000483!2.39e-08!309;UBERON:0000119!3.78e-08!312;UBERON:0001986!4.38e-08!18;UBERON:0004638!4.38e-08!18;UBERON:0004852!4.38e-08!18;UBERON:0000064!1.15e-07!219;UBERON:0000464!1.27e-07!104;UBERON:0002553!1.65e-07!70;UBERON:0000487!2.16e-07!22;UBERON:0000466!6.01e-07!126;UBERON:0001049!7.65e-07!57;UBERON:0005068!7.65e-07!57;UBERON:0006241!7.65e-07!57;UBERON:0007135!7.65e-07!57;UBERON:0001893!7.71e-07!34;UBERON:0006914!8.62e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.69e-13;18!UBERON:0001986;4.69e-13;18!UBERON:0004852;4.69e-13;18!UBERON:0000487;1.04e-11;22!UBERON:0006914;7.22e-10;25!UBERON:0001041;2.50e-09;14!UBERON:0002465;2.07e-08;10!UBERON:0001473;5.95e-08;8!UBERON:0004536;5.95e-08;8!UBERON:0006558;5.95e-08;8!UBERON:0004921;9.15e-08;33!UBERON:0000490;4.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.05e-13,18;UBERON:0001986,2.05e-13,18;UBERON:0004852,2.05e-13,18;UBERON:0000487,4.13e-12,22;UBERON:0007023,5.26e-11,114;UBERON:0006914,3.29e-10,25;UBERON:0002465,2.05e-08,10;UBERON:0004111,3.00e-08,240;UBERON:0001473,6.19e-08,8;UBERON:0004536,6.19e-08,8;UBERON:0006558,6.19e-08,8;UBERON:0000055,2.14e-07,68;UBERON:0000058,3.78e-07,19;UBERON:0001009,6.54e-07,112 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,1.31883489114227,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.785874452986276,1.09288586487763,0.370784442784429,0,0,0,0,0,0,2.18638648103376,1.72046919021225,0.347140501607594,1.13061588384802,3.35599548967925,1.6507082516404,0.835979866147242,3.10100111003195,3.91342888955381,4.35136796594071,2.01414658554573,1.52054421143703,2.4406205754817,0.735326160691737,0,4.73288559905623,3.59246996201872,2.59006405111641,0,1.89853131913626,1.46561395144326,0,3.87780264148325,1.3082821564276,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.67355336034844,0.490385709340376,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.567160915800105,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0,0,0.134831308160164,0,0,2.95262181849859,2.80483547606892,0,0,0,0,0,0,0.860919069801795,0,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0.117408694235822,3.3204282985047,1.38895653772983,3.04406643575357,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0.581267877027924,0,0.492663237895943,0.44024217006613,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,6.74106321552464,14.9580729602012,21.9640222121099,0.36807447515742,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0,0,0,0.483437798366489,0.601519410909855,1.93370076765382,0.34444334449382,0,0.393373244878272,3.15839729035188,1.46329140498388,0,1.46139224653261,0.844413031143006,1.13733384070897,2.72149928442425,0.431831832204279,4.62681758070868,0,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0,1.33953315142039,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0.708104465988849,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.974853958525138,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0.384888450902048,0,0,0.847294206991012,0,0,0.443430153536676,0.689170200620878,1.52234282769651,0.764637207142375,5.12682468456746,1.42939065274673,2.46817363851717,2.59389324477087,3.24018862342869,1.58625035258854,0.106824071127473,0,1.47024129588619,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0.556812347790485,2.46174797895425,0.811367035427949,0,0,0.935702702041099,1.31857361344705,0,0,0,0.47748896947538,1.48482340416319,0.614321404198464,0,0.281338832821026,0,0,0,2.39097585901284,0.276283915531148,1.0077309914171,0,0,0.311039587661807,2.96565558786179,0.358042349351218,0,0.493217028184668,0,0,1.93866549219044,0.556608588971108,0,0.260427761085233,4.19807999981739,0.724999575434793,4.09656413827799,0,0.945550727071745,0,0.583209226766509,0,0,0.60298219312704,0,0.442317039724898,0.295547618953547,0.658156191461918,0.10893846351899,1.95193241990045,1.53900517007594,0,1.61394733071642,0.359030577639089,1.95565269459615,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.664846727600626,0,0.392125068635479,0.167821586975843,0.189753732724185,0.476809736941136,0.210998064528027,1.14262965711403,1.41353071433941,0.216388639742091,2.98578579323551,0.796118080530053,0,0,0,0,0.404406797884062,0,1.1713222286267,0,4.89161547330224,0,1.18375320854817,2.41981432097328,0,0.695052375913368,0.300646838828985,0.207376382794494,0.66465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| ||
|short_description=p2@MANSC1 | |||
}} | }} |
Latest revision as of 04:07, 17 September 2015
Short description: | p2@MANSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MANSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000355566_5end |
EntrezGene: | MANSC1 |
HGNC: | 25505 |
UniProt: | F5H3M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.40e-22 | 24 |
endothelial cell | 7.19e-22 | 36 |
meso-epithelial cell | 5.27e-16 | 45 |
blood vessel endothelial cell | 2.05e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.05e-13 | 18 |
lining cell | 5.67e-12 | 58 |
barrier cell | 5.67e-12 | 58 |
lymphangioblast | 6.36e-11 | 6 |
endothelial cell of lymphatic vessel | 6.36e-11 | 6 |
vascular lymphangioblast | 6.36e-11 | 6 |
vein endothelial cell | 1.78e-07 | 6 |
neutrophil | 4.35e-07 | 3 |
epithelial cell | 7.00e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.05e-13 | 18 |
endothelium | 2.05e-13 | 18 |
cardiovascular system endothelium | 2.05e-13 | 18 |
simple squamous epithelium | 4.13e-12 | 22 |
adult organism | 5.26e-11 | 114 |
squamous epithelium | 3.29e-10 | 25 |
lymphoid system | 2.05e-08 | 10 |
anatomical conduit | 3.00e-08 | 240 |
lymphatic vessel | 6.19e-08 | 8 |
lymph vasculature | 6.19e-08 | 8 |
lymphatic part of lymphoid system | 6.19e-08 | 8 |
vessel | 2.14e-07 | 68 |
duct | 3.78e-07 | 19 |
circulatory system | 6.54e-07 | 112 |