FFCP PHASE1:Hg19::chr1:152957997..152958025,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:152957997..152958025,+
|short_description=p4@SPRR1A
|description=CAGE_peak_4_at_SPRR1A_5end
|association_with_transcript=24bp_to_S73288_5end
|EntrezGene=6...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6698 | |EntrezGene=6698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11259 | |HGNC=11259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_S73288_5end | |||
|cluster_id=chr1:152957997..152958025,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_4_at_SPRR1A_5end | |||
|id=chr1:152957997..152958025,+ | |||
|ontology_enrichment_celltype=CL:0002328!6.53e-19!3;CL:0002159!2.16e-16!13;CL:0000575!2.99e-13!2;CL:0002076!2.86e-12!43;CL:0000312!8.99e-12!5;CL:0000240!6.85e-10!6;CL:0000311!6.85e-10!6;CL:0000079!6.85e-10!6;CL:0000237!6.85e-10!6;CL:0000036!6.85e-10!6;CL:0000357!6.85e-10!6;CL:0000114!6.85e-10!6;CL:0002623!2.99e-09!3;CL:0002621!3.52e-09!3;CL:0000223!1.77e-08!59;CL:0002368!1.45e-07!13;CL:0000362!1.58e-07!8;CL:0000244!2.14e-07!4;CL:0000731!2.14e-07!4;CL:0002251!4.06e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.79e-16;4!CL:0000731;1.79e-16;4!CL:0000312;5.27e-13;5!CL:0000240;5.36e-11;6!CL:0000311;5.36e-11;6!CL:0000079;5.36e-11;6!CL:0000237;5.36e-11;6!CL:0002159;2.42e-10;14!CL:0000575;5.71e-09;2!CL:0000362;1.25e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.79e-16,4;CL:0000731,1.79e-16,4;CL:0000312,6.32e-13,5;CL:0000240,6.24e-11,6;CL:0000311,6.24e-11,6;CL:0000079,6.24e-11,6;CL:0000237,6.24e-11,6;CL:0000036,6.24e-11,6;CL:0000357,6.24e-11,6;CL:0000114,6.24e-11,6;CL:0002159,2.63e-10,14;CL:0000575,5.49e-09,2;CL:0000362,1.38e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.00e-17;1!CL:0000357;5.36e-11;6!CL:0000114;5.36e-11;6!UBERON:0008814;3.43e-09;2!UBERON:0010056;3.43e-09;2 | |||
|ontology_enrichment_disease=DOID:3151!1.03e-07!1;DOID:3149!1.03e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.31e-16;1!DOID:3149;1.31e-16;1!DOID:3451;5.71e-09;2!DOID:4159;5.71e-09;2!DOID:0060122;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.41e-16,1;DOID:3149,1.41e-16,1;DOID:3451,5.94e-09,2;DOID:4159,5.94e-09,2;DOID:0060122,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!6.53e-19!3;UBERON:0002031!6.53e-19!3;UBERON:0002185!2.51e-14!4;UBERON:0000166!8.57e-14!21;UBERON:0003127!9.55e-13!2;UBERON:0001004!9.40e-12!72;UBERON:0007196!1.42e-10!14;UBERON:0001558!1.42e-10!14;UBERON:0000161!3.55e-10!35;UBERON:0000165!4.02e-10!28;UBERON:0000930!4.02e-10!28;UBERON:0003102!6.42e-10!95;UBERON:0001723!1.20e-09!3;UBERON:0001033!1.20e-09!3;UBERON:0010056!1.20e-09!3;UBERON:0001949!3.52e-09!3;UBERON:0001444!4.89e-09!48;UBERON:0000078!1.34e-08!18;UBERON:0004119!6.06e-08!169;UBERON:0000925!6.06e-08!169;UBERON:0006595!6.06e-08!169;UBERON:0005178!6.78e-08!34;UBERON:0002224!6.78e-08!34;UBERON:0000065!7.44e-08!53;UBERON:0005181!1.21e-07!35;UBERON:0002372!1.51e-07!1;UBERON:0001961!1.51e-07!1;UBERON:0001744!1.51e-07!1;UBERON:0001735!1.51e-07!1;UBERON:0000072!2.18e-07!46;UBERON:0000989!2.35e-07!1;UBERON:0008811!2.35e-07!1;UBERON:0006258!2.35e-07!1;UBERON:0005876!2.35e-07!1;UBERON:0004874!2.35e-07!1;UBERON:0001043!3.85e-07!4;UBERON:0009143!3.85e-07!4;UBERON:0000964!4.77e-07!4;UBERON:0004348!4.77e-07!4;UBERON:0005427!4.77e-07!4;UBERON:0001041!9.54e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.98e-22;3!UBERON:0001033;8.98e-22;3!UBERON:0005795;8.86e-17;1!UBERON:0000365;2.23e-13;5!UBERON:0000486;3.88e-12;12!UBERON:0005910;2.62e-11;6!UBERON:0000165;4.62e-09;28!UBERON:0005911;6.94e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.47e-22,3;UBERON:0001033,9.47e-22,3;UBERON:0010056,9.47e-22,3;UBERON:0000365,2.23e-13,5;UBERON:0000166,1.83e-11,22;UBERON:0005910,2.62e-11,6;UBERON:0003102,3.41e-09,99;UBERON:0000165,9.21e-09,29;UBERON:0000930,9.21e-09,29;UBERON:0001444,7.80e-08,49;UBERON:0001042,3.54e-07,10;UBERON:0009145,3.54e-07,10;UBERON:0000161,4.21e-07,36;UBERON:0000033,7.57e-07,56 | |||
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|short_description=p4@SPRR1A | |||
}} | }} |
Latest revision as of 04:06, 17 September 2015
Short description: | p4@SPRR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPRR1A_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 24bp_to_S73288_5end |
EntrezGene: | SPRR1A |
HGNC: | 11259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.79e-16 | 4 |
urothelial cell | 1.79e-16 | 4 |
keratinocyte | 6.32e-13 | 5 |
stratified squamous epithelial cell | 6.24e-11 | 6 |
keratin accumulating cell | 6.24e-11 | 6 |
stratified epithelial cell | 6.24e-11 | 6 |
keratinizing barrier epithelial cell | 6.24e-11 | 6 |
epithelial fate stem cell | 6.24e-11 | 6 |
stratified epithelial stem cell | 6.24e-11 | 6 |
surface ectodermal cell | 6.24e-11 | 6 |
general ecto-epithelial cell | 2.63e-10 | 14 |
corneal epithelial cell | 5.49e-09 | 2 |
epidermal cell | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.47e-22 | 3 |
gustatory system | 9.47e-22 | 3 |
future tongue | 9.47e-22 | 3 |
urothelium | 2.23e-13 | 5 |
oral opening | 1.83e-11 | 22 |
transitional epithelium | 2.62e-11 | 6 |
surface structure | 3.41e-09 | 99 |
mouth | 9.21e-09 | 29 |
stomodeum | 9.21e-09 | 29 |
subdivision of head | 7.80e-08 | 49 |
chordate pharynx | 3.54e-07 | 10 |
pharyngeal region of foregut | 3.54e-07 | 10 |
orifice | 4.21e-07 | 36 |
head | 7.57e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.41e-16 | 1 |
keratoacanthoma | 1.41e-16 | 1 |
skin carcinoma | 5.94e-09 | 2 |
skin cancer | 5.94e-09 | 2 |
integumentary system cancer | 5.94e-09 | 2 |