FFCP PHASE1:Hg19::chr1:152957764..152957775,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6698 | |EntrezGene=6698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11259 | |HGNC=11259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_BC111839_5end | |||
|cluster_id=chr1:152957764..152957775,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_SPRR1A_5end | |||
|id=chr1:152957764..152957775,+ | |||
|ontology_enrichment_celltype=CL:0000622!1.48e-19!5;CL:0000154!2.50e-16!6;CL:0002159!9.12e-16!13;CL:0002076!3.10e-14!43;CL:0000317!5.60e-13!2;CL:1000448!5.60e-13!2;CL:0002308!5.60e-13!2;CL:0002140!5.60e-13!2;CL:0002251!8.03e-13!21;CL:0000362!5.72e-12!8;CL:0000150!6.21e-11!9;CL:0000223!7.80e-10!59;CL:0000240!4.11e-09!6;CL:0000311!4.11e-09!6;CL:0000079!4.11e-09!6;CL:0000237!4.11e-09!6;CL:0000036!4.11e-09!6;CL:0000357!4.11e-09!6;CL:0000114!4.11e-09!6;CL:0002623!4.42e-09!3;CL:0002621!6.86e-09!3;CL:0002077!7.82e-08!33;CL:0000244!3.42e-07!4;CL:0000731!3.42e-07!4;CL:0002336!7.40e-07!1;CL:0002261!7.40e-07!1;CL:0002170!7.40e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000622;7.17e-26;5!CL:0000154;1.10e-21;6!CL:0002623;1.05e-19;3!CL:0000244;2.96e-15;4!CL:0000731;2.96e-15;4!CL:0000150;1.10e-14;9!CL:0000317;2.31e-08;2!CL:1000448;2.31e-08;2!CL:0002308;2.31e-08;2!CL:0000575;2.31e-08;2!CL:0002140;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.20e-25,5;CL:0000154,1.69e-21,6;CL:0002623,1.53e-19,3;CL:0000244,2.39e-15,4;CL:0000731,2.39e-15,4;CL:0000150,1.45e-14,9;CL:0000317,2.67e-08,2;CL:1000448,2.67e-08,2;CL:0002308,2.67e-08,2;CL:0002140,2.67e-08,2;CL:0000575,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.56e-16;1!UBERON:0008814;1.29e-08;2!UBERON:0010056;1.29e-08;2 | |||
|ontology_enrichment_disease=DOID:3151!2.84e-07!1;DOID:3149!2.84e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!8.33e-22!21;UBERON:0000165!1.39e-19!28;UBERON:0000930!1.39e-19!28;UBERON:0000161!2.41e-15!35;UBERON:0003102!2.01e-14!95;UBERON:0001444!5.20e-13!48;UBERON:0002419!5.60e-13!2;UBERON:0007771!5.60e-13!2;UBERON:0003297!5.60e-13!2;UBERON:0001821!5.60e-13!2;UBERON:0003487!5.60e-13!2;UBERON:0001820!5.60e-13!2;UBERON:0005089!5.60e-13!2;UBERON:0005088!5.60e-13!2;UBERON:0000341!6.71e-13!2;UBERON:0000078!1.02e-11!18;UBERON:0001004!2.24e-11!72;UBERON:0001044!1.50e-09!6;UBERON:0003293!1.50e-09!6;UBERON:0003294!1.50e-09!6;UBERON:0010047!1.50e-09!6;UBERON:0000167!1.50e-09!6;UBERON:0001723!2.51e-09!3;UBERON:0001033!2.51e-09!3;UBERON:0010056!2.51e-09!3;UBERON:0001949!6.86e-09!3;UBERON:0004119!1.28e-08!169;UBERON:0000925!1.28e-08!169;UBERON:0006595!1.28e-08!169;UBERON:0002372!1.36e-07!1;UBERON:0001961!1.36e-07!1;UBERON:0001744!1.36e-07!1;UBERON:0001735!1.36e-07!1;UBERON:0001003!6.96e-07!14;UBERON:0007376!6.96e-07!14;UBERON:0007383!6.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.87e-20;3!UBERON:0001033;4.87e-20;3!UBERON:0005795;9.28e-16;1!UBERON:0002372;2.06e-15;1!UBERON:0001961;2.06e-15;1!UBERON:0001744;2.06e-15;1!UBERON:0001042;2.06e-15;1!UBERON:0001735;2.06e-15;1!UBERON:0000165;1.19e-12;28!UBERON:0000365;2.12e-12;5!UBERON:0005910;1.73e-10;6!UBERON:0001044;2.40e-10;6!UBERON:0003293;2.40e-10;6!UBERON:0003294;2.40e-10;6!UBERON:0010047;2.40e-10;6!UBERON:0003408;2.40e-10;6!UBERON:0000167;2.40e-10;6!UBERON:0001041;8.96e-10;14!UBERON:0000341;1.55e-08;2!UBERON:0003127;2.31e-08;2!UBERON:0002419;2.31e-08;2!UBERON:0006562;2.31e-08;2!UBERON:0007771;2.31e-08;2!UBERON:0003297;2.31e-08;2!UBERON:0001821;2.31e-08;2!UBERON:0003487;2.31e-08;2!UBERON:0001820;2.31e-08;2!UBERON:0007811;1.35e-07;52!UBERON:0000161;2.95e-07;19!UBERON:0000166;2.95e-07;19!UBERON:0000153;4.35e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.02e-20,3;UBERON:0001033,4.02e-20,3;UBERON:0010056,4.02e-20,3;UBERON:0000166,4.04e-16,22;UBERON:0002372,1.16e-15,1;UBERON:0001961,1.16e-15,1;UBERON:0001744,1.16e-15,1;UBERON:0001735,1.16e-15,1;UBERON:0001042,1.54e-13,10;UBERON:0009145,1.54e-13,10;UBERON:0000365,1.79e-12,5;UBERON:0006562,2.30e-12,11;UBERON:0000165,3.09e-12,29;UBERON:0000930,3.09e-12,29;UBERON:0000153,1.07e-10,62;UBERON:0007811,1.07e-10,62;UBERON:0005910,1.50e-10,6;UBERON:0001044,2.90e-10,6;UBERON:0003293,2.90e-10,6;UBERON:0003294,2.90e-10,6;UBERON:0010047,2.90e-10,6;UBERON:0000167,2.90e-10,6;UBERON:0001444,4.05e-10,49;UBERON:0000161,7.44e-10,36;UBERON:0000033,8.11e-09,56;UBERON:0000341,1.61e-08,2;UBERON:0003127,2.31e-08,2;UBERON:0002419,2.67e-08,2;UBERON:0007771,2.67e-08,2;UBERON:0003297,2.67e-08,2;UBERON:0001821,2.67e-08,2;UBERON:0003487,2.67e-08,2;UBERON:0001820,2.67e-08,2;UBERON:0005089,2.67e-08,2;UBERON:0005088,2.67e-08,2;UBERON:0001041,1.67e-07,87;UBERON:0001557,2.18e-07,19 | |||
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|short_description=p3@SPRR1A | |||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p3@SPRR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPRR1A_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 58bp_to_BC111839_5end |
EntrezGene: | SPRR1A |
HGNC: | 11259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.20e-25 | 5 |
protein secreting cell | 1.69e-21 | 6 |
acinar cell of salivary gland | 1.53e-19 | 3 |
transitional epithelial cell | 2.39e-15 | 4 |
urothelial cell | 2.39e-15 | 4 |
glandular epithelial cell | 1.45e-14 | 9 |
sebum secreting cell | 2.67e-08 | 2 |
epithelial cell of sweat gland | 2.67e-08 | 2 |
epithelial cell of skin gland | 2.67e-08 | 2 |
acinar cell of sebaceous gland | 2.67e-08 | 2 |
corneal epithelial cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.02e-20 | 3 |
gustatory system | 4.02e-20 | 3 |
future tongue | 4.02e-20 | 3 |
oral opening | 4.04e-16 | 22 |
tonsil | 1.16e-15 | 1 |
mucosa-associated lymphoid tissue | 1.16e-15 | 1 |
lymphoid tissue | 1.16e-15 | 1 |
tonsillar ring | 1.16e-15 | 1 |
chordate pharynx | 1.54e-13 | 10 |
pharyngeal region of foregut | 1.54e-13 | 10 |
urothelium | 1.79e-12 | 5 |
pharynx | 2.30e-12 | 11 |
mouth | 3.09e-12 | 29 |
stomodeum | 3.09e-12 | 29 |
anterior region of body | 1.07e-10 | 62 |
craniocervical region | 1.07e-10 | 62 |
transitional epithelium | 1.50e-10 | 6 |
saliva-secreting gland | 2.90e-10 | 6 |
gland of oral region | 2.90e-10 | 6 |
gland of foregut | 2.90e-10 | 6 |
oral gland | 2.90e-10 | 6 |
oral cavity | 2.90e-10 | 6 |
subdivision of head | 4.05e-10 | 49 |
orifice | 7.44e-10 | 36 |
head | 8.11e-09 | 56 |
throat | 1.61e-08 | 2 |
open tracheal system trachea | 2.31e-08 | 2 |
skin gland | 2.67e-08 | 2 |
epidermis gland | 2.67e-08 | 2 |
gland of integumental system | 2.67e-08 | 2 |
sebaceous gland | 2.67e-08 | 2 |
skin sebaceous gland | 2.67e-08 | 2 |
sweat gland | 2.67e-08 | 2 |
sweat gland placode | 2.67e-08 | 2 |
sebaceous gland placode | 2.67e-08 | 2 |
foregut | 1.67e-07 | 87 |
upper respiratory tract | 2.18e-07 | 19 |