FFCP PHASE1:Hg19::chr3:185300305..185300324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59343 | |EntrezGene=59343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23116 | |HGNC=23116 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYB7 | |UniProt=C9IYB7 | ||
|association_with_transcript=21bp_to_ENST00000430355_5end | |association_with_transcript=21bp_to_ENST00000430355_5end | ||
|cluster_id=chr3:185300305..185300324,+ | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_7_at_SENP2_5end | |description=CAGE_peak_7_at_SENP2_5end | ||
|id=chr3:185300305..185300324,+ | |id=chr3:185300305..185300324,+ | ||
|ontology_enrichment_celltype=CL:0002322!9.25e-59!5;CL:0000039!1.12e-27!7;CL:0000586!1.12e-27!7;CL:0000540!5.30e-18!6;CL:0000031!5.30e-18!6;CL:0000404!5.30e-18!6;CL:0000047!1.16e-13!8;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000147!3.87e-08!14;CL:0000075!3.82e-07!27 | |ontology_enrichment_celltype=CL:0002322!9.25e-59!5;CL:0000039!1.12e-27!7;CL:0000586!1.12e-27!7;CL:0000540!5.30e-18!6;CL:0000031!5.30e-18!6;CL:0000404!5.30e-18!6;CL:0000047!1.16e-13!8;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000147!3.87e-08!14;CL:0000075!3.82e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-70;5!CL:0000039;3.20e-33;7!CL:0000586;3.20e-33;7!CL:0002321;1.01e-23;15!CL:0000540;1.75e-21;6!CL:0000404;1.75e-21;6!CL:0000148;2.30e-13;10!CL:0000147;1.03e-09;14!CL:0000710;5.86e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-70,5;CL:0000039,3.07e-33,7;CL:0000586,3.07e-33,7;CL:0000540,1.57e-21,6;CL:0000031,1.57e-21,6;CL:0000404,1.57e-21,6;CL:0000047,2.53e-16,8;CL:0000148,2.35e-13,10;CL:0000541,2.35e-13,10;CL:0000147,1.04e-09,14;CL:0000133,4.98e-08,59;CL:0000710,5.92e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-23;10!UBERON:0005564;2.18e-23;10!CL:0000031;1.75e-21;6 | |||
|ontology_enrichment_disease=DOID:3095!4.91e-19!22;DOID:2994!4.91e-19!22 | |ontology_enrichment_disease=DOID:3095!4.91e-19!22;DOID:2994!4.91e-19!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.46e-16;22!DOID:2994;2.46e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.50e-16,22;DOID:2994,2.50e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.90e-24!8;UBERON:0003135!9.73e-18!11;UBERON:0000991!4.12e-14!21;UBERON:0009196!4.12e-14!21;UBERON:0009117!4.12e-14!21;UBERON:0005564!4.12e-14!21;UBERON:0004176!1.81e-13!22;UBERON:0003101!5.49e-09!22;UBERON:0000079!5.49e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!2.90e-24!8;UBERON:0003135!9.73e-18!11;UBERON:0000991!4.12e-14!21;UBERON:0009196!4.12e-14!21;UBERON:0009117!4.12e-14!21;UBERON:0005564!4.12e-14!21;UBERON:0004176!1.81e-13!22;UBERON:0003101!5.49e-09!22;UBERON:0000079!5.49e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.97e-29;8!UBERON:0003135;2.67e-21;11!UBERON:0000922;2.55e-14;49!UBERON:0000991;2.61e-11;21!UBERON:0003101;8.29e-11;22!UBERON:0000079;8.29e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.83e-29,8;UBERON:0003135,2.61e-21,11;UBERON:0000991,2.57e-11,21;UBERON:0009196,2.57e-11,21;UBERON:0009117,2.57e-11,21;UBERON:0005564,2.57e-11,21;UBERON:0004176,8.18e-11,22;UBERON:0003101,8.18e-11,22;UBERON:0000079,8.18e-11,22 | |||
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|short_description=p7@SENP2 | |short_description=p7@SENP2 | ||
}} | }} |
Latest revision as of 03:52, 17 September 2015
Short description: | p7@SENP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SENP2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 21bp_to_ENST00000430355_5end |
EntrezGene: | SENP2 |
HGNC: | 23116 |
UniProt: | C9IYB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-70 | 5 |
germ line cell | 3.07e-33 | 7 |
germ cell | 3.07e-33 | 7 |
neuron | 1.57e-21 | 6 |
neuroblast | 1.57e-21 | 6 |
electrically signaling cell | 1.57e-21 | 6 |
neuronal stem cell | 2.53e-16 | 8 |
melanocyte | 2.35e-13 | 10 |
melanoblast | 2.35e-13 | 10 |
pigment cell | 1.04e-09 | 14 |
neurectodermal cell | 4.98e-08 | 59 |
neurecto-epithelial cell | 5.92e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 3.83e-29 | 8 |
male reproductive organ | 2.61e-21 | 11 |
gonad | 2.57e-11 | 21 |
indifferent external genitalia | 2.57e-11 | 21 |
indifferent gonad | 2.57e-11 | 21 |
gonad primordium | 2.57e-11 | 21 |
external genitalia | 8.18e-11 | 22 |
male organism | 8.18e-11 | 22 |
male reproductive system | 8.18e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.50e-16 | 22 |
germ cell cancer | 2.50e-16 | 22 |