FFCP PHASE1:Hg19::chr1:152758726..152758741,+: Difference between revisions
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|id=chr1:152758726..152758741,+
|short_description=p1@LCE1E
|description=CAGE_peak_1_at_LCE1E_5end
|association_with_transcript=-11bp_to_ENST00000368770,NM_178353,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=353135 | |EntrezGene=353135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29466 | |HGNC=29466 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T753 | |UniProt=Q5T753 | ||
|association_with_transcript=-11bp_to_ENST00000368770,NM_178353,uc001fan.2_5end | |||
|cluster_id=chr1:152758726..152758741,+ | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_1_at_LCE1E_5end | |||
|id=chr1:152758726..152758741,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.13e-14!13;CL:0000240!2.54e-10!6;CL:0000311!2.54e-10!6;CL:0000079!2.54e-10!6;CL:0000237!2.54e-10!6;CL:0000036!2.54e-10!6;CL:0000357!2.54e-10!6;CL:0000114!2.54e-10!6;CL:0000312!2.11e-08!5;CL:0000362!7.27e-08!8;CL:0002077!9.91e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.14e-13;14!CL:0000575;7.66e-12;2!CL:0000622;7.36e-11;5!CL:0000312;1.63e-10;5!CL:0000362;4.39e-10;9!CL:0000154;3.98e-09;6!CL:0002573;5.08e-09;2!CL:0000240;7.70e-09;6!CL:0000311;7.70e-09;6!CL:0000079;7.70e-09;6!CL:0000237;7.70e-09;6!CL:0002623;1.43e-08;3!CL:0000945;7.92e-08;24!CL:0002327;8.74e-07;4!CL:0002591;9.50e-07;1!CL:0002601;9.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.19e-13,14;CL:0000575,8.11e-12,2;CL:0000622,8.01e-11,5;CL:0000312,1.66e-10,5;CL:0000362,4.50e-10,9;CL:0000154,4.27e-09,6;CL:0002573,5.09e-09,2;CL:0000240,7.81e-09,6;CL:0000311,7.81e-09,6;CL:0000079,7.81e-09,6;CL:0000237,7.81e-09,6;CL:0000036,7.81e-09,6;CL:0000357,7.81e-09,6;CL:0000114,7.81e-09,6;CL:0002623,1.54e-08,3;CL:0000945,5.98e-08,24;CL:0000826,5.98e-08,24;CL:0002077,4.40e-07,34;CL:0002327,8.75e-07,4;CL:0002601,9.51e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;7.70e-09;6!CL:0000114;7.70e-09;6!UBERON:0004874;9.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.66e-08;3!DOID:127;1.66e-08;3!DOID:3151;3.26e-07;1!DOID:3149;3.26e-07;1!DOID:3347;4.01e-07;1!DOID:630;4.91e-07;1!DOID:0050177;4.91e-07;1!DOID:0050427;4.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.24e-08,3;DOID:127,2.24e-08,3;DOID:3151,3.36e-07,1;DOID:3149,3.36e-07,1;DOID:3347,3.78e-07,1;DOID:630,5.37e-07,1;DOID:0050177,5.37e-07,1;DOID:0050427,5.37e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.08e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;3.44e-09;15!UBERON:0007376;3.44e-09;15!UBERON:0007029;3.26e-07;1!UBERON:0000014;8.74e-07;4!UBERON:0001911;8.74e-07;4!UBERON:0000989;9.50e-07;1!UBERON:0008811;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.48e-09,15;UBERON:0007376,3.48e-09,15;UBERON:0007383,3.48e-09,15;UBERON:0007029,3.17e-07,1;UBERON:0000014,8.75e-07,4;UBERON:0001911,8.75e-07,4;UBERON:0005333,8.75e-07,4;UBERON:0008425,8.75e-07,4;UBERON:0005311,8.75e-07,4;UBERON:0000989,8.98e-07,1;UBERON:0008811,8.98e-07,1;UBERON:0006258,8.98e-07,1;UBERON:0005876,8.98e-07,1;UBERON:0004874,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.88831355734875,1.96776953284198,0,0,0,0,0,0,4.6480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85350742062426,1.1240175325762,1.60846355858609,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.447792613514241,4.65014301622339,14.1851591291128,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,1.06765302817952,0,0.581051892299796,0,0,0.736647911487171,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,2.8309505256046,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,8.22600091243759,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.492137407573744,0,0,0,0,0,0,0,0,0,6.03782437678679,0,0,0,0,1.53532157855556,0,0,0,1.08599920350743,0,7.51150928251641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,0,0,0,4.8325194824207,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.313972371402056,0,0,0,5.39818978046554,0,0,0,0,0,0,0,1.19502933965765,39.4018007234032,0,47.3328002922261,48.1455736889241,0,0,0,0,0,0,0,0,0,0,6.79995390282795,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,15.8802692272061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.88831355734875,1.96776953284198,0,0,0,0,0,0,4.6480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85350742062426,1.1240175325762,1.60846355858609,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.447792613514241,4.65014301622339,14.1851591291128,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,1.06765302817952,0,0.581051892299796,0,0,0.736647911487171,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,2.8309505256046,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,8.22600091243759,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.492137407573744,0,0,0,0,0,0,0,0,0,6.03782437678679,0,0,0,0,1.53532157855556,0,0,0,1.08599920350743,0,7.51150928251641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,0,0,0,4.8325194824207,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.313972371402056,0,0,0,5.39818978046554,0,0,0,0,0,0,0,1.19502933965765,39.4018007234032,0,47.3328002922261,48.1455736889241,0,0,0,0,0,0,0,0,0,0,6.79995390282795,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,15.8802692272061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,2.56454793842586 | ||
|short_description=p1@LCE1E | |||
}} | }} |
Latest revision as of 03:49, 17 September 2015
Short description: | p1@LCE1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCE1E_5end |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | -11bp_to_ENST00000368770, NM_178353, uc001fan.2_5end |
EntrezGene: | LCE1E |
HGNC: | 29466 |
UniProt: | Q5T753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.19e-13 | 14 |
corneal epithelial cell | 8.11e-12 | 2 |
acinar cell | 8.01e-11 | 5 |
keratinocyte | 1.66e-10 | 5 |
epidermal cell | 4.50e-10 | 9 |
protein secreting cell | 4.27e-09 | 6 |
Schwann cell | 5.09e-09 | 2 |
stratified squamous epithelial cell | 7.81e-09 | 6 |
keratin accumulating cell | 7.81e-09 | 6 |
stratified epithelial cell | 7.81e-09 | 6 |
keratinizing barrier epithelial cell | 7.81e-09 | 6 |
epithelial fate stem cell | 7.81e-09 | 6 |
stratified epithelial stem cell | 7.81e-09 | 6 |
surface ectodermal cell | 7.81e-09 | 6 |
acinar cell of salivary gland | 1.54e-08 | 3 |
lymphocyte of B lineage | 5.98e-08 | 24 |
pro-B cell | 5.98e-08 | 24 |
ecto-epithelial cell | 4.40e-07 | 34 |
mammary gland epithelial cell | 8.75e-07 | 4 |
uterine smooth muscle cell | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.48e-09 | 15 |
outer epithelium | 3.48e-09 | 15 |
enveloping layer of ectoderm | 3.48e-09 | 15 |
surface | 3.17e-07 | 1 |
zone of skin | 8.75e-07 | 4 |
mammary gland | 8.75e-07 | 4 |
mammary bud | 8.75e-07 | 4 |
mammary ridge | 8.75e-07 | 4 |
mammary placode | 8.75e-07 | 4 |
penis | 8.98e-07 | 1 |
intromittent organ | 8.98e-07 | 1 |
lateral plate mesenchyme | 8.98e-07 | 1 |
undifferentiated genital tubercle | 8.98e-07 | 1 |
somatopleure | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.24e-08 | 3 |
leiomyoma | 2.24e-08 | 3 |
skin squamous cell carcinoma | 3.36e-07 | 1 |
keratoacanthoma | 3.36e-07 | 1 |
osteosarcoma | 3.78e-07 | 1 |
genetic disease | 5.37e-07 | 1 |
monogenic disease | 5.37e-07 | 1 |
xeroderma pigmentosum | 5.37e-07 | 1 |