FFCP PHASE1:Hg19::chr2:137523143..137523154,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:137523143..137523154,+
|short_description=p2@THSD7B
|description=CAGE_peak_2_at_THSD7B_5end
|association_with_transcript=28bp_to_ENST00000409968,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80731 | |EntrezGene=80731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29348 | |HGNC=29348 | ||
|TSSclassifier=strong | |||
|UniProt=E7EM75 | |UniProt=E7EM75 | ||
|association_with_transcript=28bp_to_ENST00000409968,ENST00000472720,uc010zbj.1_5end | |||
|cluster_id=chr2:137523143..137523154,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_2_at_THSD7B_5end | |||
|id=chr2:137523143..137523154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.95e-17;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.30e-11;2!UBERON:0003056;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:171!9.98e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.90e-14;6!DOID:171;4.75e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.90e-14,6;DOID:171,4.75e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0000073!6.53e-21!94;UBERON:0001016!6.53e-21!94;UBERON:0002346!3.07e-19!90;UBERON:0005743!8.02e-19!86;UBERON:0001017!2.10e-18!82;UBERON:0003075!1.79e-17!86;UBERON:0007284!1.79e-17!86;UBERON:0002616!7.52e-17!59;UBERON:0000924!1.53e-15!173;UBERON:0006601!1.53e-15!173;UBERON:0001950!2.58e-15!20;UBERON:0001893!5.57e-15!34;UBERON:0000955!7.26e-15!69;UBERON:0006238!7.26e-15!69;UBERON:0007023!2.20e-14!115;UBERON:0004121!3.90e-14!169;UBERON:0002619!9.69e-14!22;UBERON:0002780!1.24e-13!41;UBERON:0001890!1.24e-13!41;UBERON:0006240!1.24e-13!41;UBERON:0002791!1.79e-13!33;UBERON:0003080!3.24e-13!42;UBERON:0002020!5.76e-13!34;UBERON:0003528!5.76e-13!34;UBERON:0001869!3.76e-12!32;UBERON:0000153!4.96e-12!129;UBERON:0007811!4.96e-12!129;UBERON:0000956!7.76e-12!25;UBERON:0000203!7.76e-12!25;UBERON:0002298!1.73e-11!8;UBERON:0001871!2.49e-11!7;UBERON:0000033!6.16e-11!123;UBERON:0000200!1.24e-10!6;UBERON:0003056!2.56e-10!61;UBERON:0003076!3.12e-10!15;UBERON:0003057!3.12e-10!15;UBERON:0001896!1.24e-08!3;UBERON:0005290!1.24e-08!3;UBERON:0010096!1.24e-08!3;UBERON:0002771!1.42e-08!3;UBERON:0004733!2.46e-07!12;UBERON:0002028!2.46e-07!12;UBERON:0007277!2.46e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.95e-17;5!UBERON:0002410;3.95e-17;5!UBERON:0000010;5.93e-10;8!UBERON:0000922;7.47e-10;49!UBERON:0001950;3.54e-09;20!UBERON:0002619;1.98e-08;22!UBERON:0000988;6.78e-08;3!UBERON:0002114;8.02e-08;2!UBERON:0000956;1.60e-07;25!UBERON:0000203;1.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.95e-17,5;UBERON:0002410,3.95e-17,5;UBERON:0001016,2.14e-10,89;UBERON:0000010,5.93e-10,8;UBERON:0001950,3.64e-09,20;UBERON:0002619,2.03e-08,22;UBERON:0000988,7.26e-08,3;UBERON:0002114,8.29e-08,2;UBERON:0000956,1.63e-07,25;UBERON:0000203,1.63e-07,25;UBERON:0000955,3.33e-07,68;UBERON:0006238,3.33e-07,68;UBERON:0004121,6.04e-07,171;UBERON:0000924,6.04e-07,171;UBERON:0006601,6.04e-07,171 | |||
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| ||
|short_description=p2@THSD7B | |||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p2@THSD7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THSD7B_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 28bp_to_ENST00000409968, ENST00000472720, uc010zbj.1_5end |
EntrezGene: | THSD7B |
HGNC: | 29348 |
UniProt: | E7EM75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.95e-17 | 5 |
autonomic nervous system | 3.95e-17 | 5 |
nervous system | 2.14e-10 | 89 |
peripheral nervous system | 5.93e-10 | 8 |
neocortex | 3.64e-09 | 20 |
regional part of cerebral cortex | 2.03e-08 | 22 |
pons | 7.26e-08 | 3 |
duodenum | 8.29e-08 | 2 |
cerebral cortex | 1.63e-07 | 25 |
pallium | 1.63e-07 | 25 |
brain | 3.33e-07 | 68 |
future brain | 3.33e-07 | 68 |
ectoderm-derived structure | 6.04e-07 | 171 |
ectoderm | 6.04e-07 | 171 |
presumptive ectoderm | 6.04e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.90e-14 | 6 |
neuroectodermal tumor | 4.75e-09 | 10 |