FFCP PHASE1:Hg19::chr17:7017610..7017630,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=433 | |EntrezGene=433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=743 | |HGNC=743 | ||
|TSSclassifier=strong | |||
|UniProt=P07307,Q7Z4G9 | |UniProt=P07307,Q7Z4G9 | ||
|association_with_transcript=0bp_to_ENST00000446679,NM_080914,uc002gem.1,uc002gen.1,uc002geo.1_5end | |association_with_transcript=0bp_to_ENST00000446679,NM_080914,uc002gem.1,uc002gen.1,uc002geo.1_5end | ||
|cluster_id=chr17:7017610..7017630,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_ASGR2_5end | |description=CAGE_peak_8_at_ASGR2_5end | ||
|id=chr17:7017610..7017630,- | |id=chr17:7017610..7017630,- | ||
|ontology_enrichment_celltype=CL:0000860;2.10e-48;33!CL:0002057;2.10e-48;33!CL:0000473;4.79e-32;39!CL:0000234;4.79e-32;39!CL:0000576;9.60e-26;48!CL:0000182;1.57e-22;12!CL:0000766;9.29e-14;69!CL:0000763;9.40e-07;100 | |ontology_enrichment_celltype=CL:0002057!1.09e-84!42;CL:0000860!2.41e-78!45;CL:0002009!2.89e-56!65;CL:0002194!4.59e-55!63;CL:0000576!4.59e-55!63;CL:0000040!4.59e-55!63;CL:0000559!4.59e-55!63;CL:0000766!2.85e-52!76;CL:0000557!1.13e-50!71;CL:0000839!1.37e-48!70;CL:0000763!8.38e-38!112;CL:0000049!8.38e-38!112;CL:0000738!1.66e-29!140;CL:0002087!2.90e-29!119;CL:0002031!1.14e-24!124;CL:0000037!2.00e-24!172;CL:0000566!2.00e-24!172;CL:0000988!1.97e-22!182;CL:0002032!4.96e-22!165;CL:0000837!4.96e-22!165;CL:0000134!1.16e-09!358;CL:0000767!2.76e-09!3;CL:0002320!3.07e-09!365;CL:0000181!4.79e-09!12;CL:0000417!4.79e-09!12;CL:0000668!4.79e-09!12;CL:0000414!4.79e-09!12;CL:0000412!4.79e-09!12;CL:0000182!4.79e-09!12;CL:0000842!1.96e-08!3;CL:0000219!9.13e-08!390;CL:0002393!4.14e-07!9;CL:0002397!4.14e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.10e-48;33!CL:0002057;2.10e-48;33!CL:0000473;4.79e-32;39!CL:0000234;4.79e-32;39!CL:0000576;9.60e-26;48!CL:0000182;1.57e-22;12!CL:0000766;9.29e-14;69!CL:0000763;9.40e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.02e-41,42;CL:0002057,3.02e-41,42;CL:0000473,9.97e-36,48;CL:0000234,9.97e-36,48;CL:0002194,5.35e-28,59;CL:0000576,5.35e-28,59;CL:0000040,5.35e-28,59;CL:0000559,5.35e-28,59;CL:0002009,5.33e-27,61;CL:0000766,1.49e-25,72;CL:0000839,9.15e-25,66;CL:0000557,2.34e-24,67;CL:0000182,1.30e-22,12;CL:0000763,4.51e-16,108;CL:0000049,4.51e-16,108;CL:0002087,4.77e-13,115;CL:0002031,2.19e-12,120;CL:0000738,3.87e-12,136;CL:0002032,8.92e-10,161;CL:0000837,8.92e-10,161;CL:0000037,3.06e-09,168;CL:0000988,1.30e-08,177;CL:0000134,6.51e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.18e-32;42!UBERON:0004161;3.12e-17;11!UBERON:0009497;1.47e-14;13!CL:0000049;7.42e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;8.57e-25;19!UBERON:0006925;8.57e-25;19!UBERON:0002423;1.39e-18;25!UBERON:0002365;3.02e-14;31!UBERON:0002330;3.02e-14;31!UBERON:0002368;1.41e-12;33!UBERON:0000949;3.00e-09;43 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.83e-53!115;UBERON:0002390!1.08e-46!102;UBERON:0003061!1.08e-46!102;UBERON:0002193!1.09e-45!112;UBERON:0002371!7.69e-44!80;UBERON:0001474!4.48e-40!86;UBERON:0004765!1.31e-32!101;UBERON:0001434!1.31e-32!101;UBERON:0003081!6.84e-17!216;UBERON:0002204!9.68e-16!167;UBERON:0005057!9.92e-10!26;UBERON:0002107!1.74e-09!19;UBERON:0006925!1.74e-09!19;UBERON:0008836!1.74e-09!19;UBERON:0002384!1.15e-08!375;UBERON:0000926!2.29e-08!448;UBERON:0004120!2.29e-08!448;UBERON:0006603!2.29e-08!448;UBERON:0008835!5.61e-08!22;UBERON:0003894!5.61e-08!22;UBERON:0009854!1.46e-07!23;UBERON:0007499!7.77e-07!25;UBERON:0009497!7.77e-07!25;UBERON:0000015!7.77e-07!25;UBERON:0002423!7.77e-07!25;UBERON:0006235!7.77e-07!25;UBERON:0004161!7.77e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.57e-25;19!UBERON:0006925;8.57e-25;19!UBERON:0002423;1.39e-18;25!UBERON:0002365;3.02e-14;31!UBERON:0002330;3.02e-14;31!UBERON:0002368;1.41e-12;33!UBERON:0000949;3.00e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.34e-25,19;UBERON:0006925,7.34e-25,19;UBERON:0008836,7.34e-25,19;UBERON:0008835,2.53e-21,22;UBERON:0003894,2.53e-21,22;UBERON:0002371,3.64e-21,76;UBERON:0009854,2.38e-20,23;UBERON:0001474,2.02e-19,82;UBERON:0007499,1.24e-18,25;UBERON:0009497,1.24e-18,25;UBERON:0000015,1.24e-18,25;UBERON:0002423,1.24e-18,25;UBERON:0006235,1.24e-18,25;UBERON:0004161,1.24e-18,25;UBERON:0009856,7.11e-18,26;UBERON:0004765,1.88e-17,90;UBERON:0002405,8.45e-17,93;UBERON:0002390,8.43e-16,98;UBERON:0003061,8.43e-16,98;UBERON:0001434,1.98e-15,100;UBERON:0002365,8.21e-15,31;UBERON:0002330,8.21e-15,31;UBERON:0002193,4.45e-14,108;UBERON:0002368,5.44e-13,35;UBERON:0000949,7.48e-10,45;UBERON:0002204,4.33e-08,167;UBERON:0003929,5.07e-08,54;UBERON:0005172,5.07e-08,54;UBERON:0005173,5.07e-08,54;UBERON:0002530,3.02e-07,59;UBERON:0002417,4.16e-07,60;UBERON:0000916,4.16e-07,60 | |||
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| ||
|short_description=p8@ASGR2 | |short_description=p8@ASGR2 | ||
}} | }} |
Latest revision as of 03:40, 17 September 2015
Short description: | p8@ASGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ASGR2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000446679, NM_080914, uc002gem.1, uc002gen.1, uc002geo.1_5end |
EntrezGene: | ASGR2 |
HGNC: | 743 |
UniProt: | P07307Q7Z4G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.02e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-41 | 42 |
defensive cell | 9.97e-36 | 48 |
phagocyte | 9.97e-36 | 48 |
monopoietic cell | 5.35e-28 | 59 |
monocyte | 5.35e-28 | 59 |
monoblast | 5.35e-28 | 59 |
promonocyte | 5.35e-28 | 59 |
macrophage dendritic cell progenitor | 5.33e-27 | 61 |
myeloid leukocyte | 1.49e-25 | 72 |
myeloid lineage restricted progenitor cell | 9.15e-25 | 66 |
granulocyte monocyte progenitor cell | 2.34e-24 | 67 |
hepatocyte | 1.30e-22 | 12 |
myeloid cell | 4.51e-16 | 108 |
common myeloid progenitor | 4.51e-16 | 108 |
nongranular leukocyte | 4.77e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.19e-12 | 120 |
leukocyte | 3.87e-12 | 136 |
hematopoietic oligopotent progenitor cell | 8.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.92e-10 | 161 |
hematopoietic stem cell | 3.06e-09 | 168 |
hematopoietic cell | 1.30e-08 | 177 |
mesenchymal cell | 6.51e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
liver | 7.34e-25 | 19 |
digestive gland | 7.34e-25 | 19 |
liver bud | 7.34e-25 | 19 |
hepatic diverticulum | 2.53e-21 | 22 |
liver primordium | 2.53e-21 | 22 |
bone marrow | 3.64e-21 | 76 |
digestive tract diverticulum | 2.38e-20 | 23 |
bone element | 2.02e-19 | 82 |
epithelial sac | 1.24e-18 | 25 |
epithelium of foregut-midgut junction | 1.24e-18 | 25 |
anatomical boundary | 1.24e-18 | 25 |
hepatobiliary system | 1.24e-18 | 25 |
foregut-midgut junction | 1.24e-18 | 25 |
septum transversum | 1.24e-18 | 25 |
sac | 7.11e-18 | 26 |
skeletal element | 1.88e-17 | 90 |
immune system | 8.45e-17 | 93 |
hematopoietic system | 8.43e-16 | 98 |
blood island | 8.43e-16 | 98 |
skeletal system | 1.98e-15 | 100 |
exocrine gland | 8.21e-15 | 31 |
exocrine system | 8.21e-15 | 31 |
hemolymphoid system | 4.45e-14 | 108 |
endocrine gland | 5.44e-13 | 35 |
endocrine system | 7.48e-10 | 45 |
musculoskeletal system | 4.33e-08 | 167 |
gut epithelium | 5.07e-08 | 54 |
abdomen element | 5.07e-08 | 54 |
abdominal segment element | 5.07e-08 | 54 |
gland | 3.02e-07 | 59 |
abdominal segment of trunk | 4.16e-07 | 60 |
abdomen | 4.16e-07 | 60 |