FFCP PHASE1:Hg19::chr7:150329389..150329412,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=474344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21918 | |||
|TSSclassifier=strong | |||
|UniProt=C9JPL9 | |||
|association_with_transcript=0bp_to_ENST00000477013_5end | |||
|cluster_id=chr7:150329389..150329412,- | |||
|coexpression_cluster_id=C1092 | |||
|description=CAGE_peak_3_at_GIMAP6_5end | |||
|id=chr7:150329389..150329412,- | |||
|ontology_enrichment_celltype=CL:0000115!5.84e-20!35;CL:0002139!2.43e-18!24;CL:0000791!1.14e-14!18;CL:0000789!1.14e-14!18;CL:0002420!1.14e-14!18;CL:0002419!1.14e-14!18;CL:0000790!1.14e-14!18;CL:0000071!2.24e-14!18;CL:0002546!2.24e-14!18;CL:0002078!2.29e-13!44;CL:0000084!2.45e-11!25;CL:0000827!2.45e-11!25;CL:0002087!5.39e-11!119;CL:0000625!1.28e-10!11;CL:0000738!1.88e-09!140;CL:0002031!7.20e-09!124;CL:1000413!3.73e-08!9;CL:0000213!7.15e-08!57;CL:0000215!7.15e-08!57;CL:0000838!3.57e-07!52;CL:0000037!4.08e-07!172;CL:0000566!4.08e-07!172;CL:0000542!7.10e-07!53;CL:0000051!7.10e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-22;24!CL:0000115;5.78e-20;36!CL:0000071;2.27e-18;18!CL:0000791;5.80e-16;18!CL:0000789;5.80e-16;18!CL:0002419;5.80e-16;18!CL:0000625;5.17e-15;11!CL:0002078;4.86e-12;45!CL:0000084;3.48e-10;25!CL:1000413;1.80e-09;9!CL:0000213;3.05e-08;58!CL:0000215;3.05e-08;58!CL:0002543;2.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.35e-24,36;CL:0002139,2.89e-23,24;CL:0000071,5.95e-19,18;CL:0002546,5.95e-19,18;CL:0002078,8.76e-18,45;CL:0000791,5.94e-16,18;CL:0000789,5.94e-16,18;CL:0002420,5.94e-16,18;CL:0002419,5.94e-16,18;CL:0000790,5.94e-16,18;CL:0000625,6.09e-15,11;CL:0000213,8.01e-12,58;CL:0000215,8.01e-12,58;CL:0000084,3.53e-10,25;CL:0000827,3.53e-10,25;CL:1000413,9.04e-10,9;CL:0002543,1.16e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.27e-18;18!CL:0000790;5.80e-16;18!UBERON:0004872;2.91e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.83e-39!115;UBERON:0001986!2.24e-14!18;UBERON:0004638!2.24e-14!18;UBERON:0004852!2.24e-14!18;UBERON:0000487!1.64e-10!22;UBERON:0002193!9.06e-10!112;UBERON:0001049!1.06e-08!57;UBERON:0005068!1.06e-08!57;UBERON:0006241!1.06e-08!57;UBERON:0007135!1.06e-08!57;UBERON:0006914!1.76e-08!25;UBERON:0003915!3.73e-08!9;UBERON:0004700!3.73e-08!9;UBERON:0001917!3.73e-08!9;UBERON:0003080!4.27e-08!42;UBERON:0002780!1.49e-07!41;UBERON:0001890!1.49e-07!41;UBERON:0006240!1.49e-07!41;UBERON:0002390!4.02e-07!102;UBERON:0003061!4.02e-07!102;UBERON:0003081!7.76e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.27e-18;18!UBERON:0001986;2.27e-18;18!UBERON:0004852;2.27e-18;18!UBERON:0000487;4.45e-14;22!UBERON:0006914;8.74e-12;25!UBERON:0003915;1.80e-09;9!UBERON:0004700;1.80e-09;9!UBERON:0001917;1.80e-09;9!UBERON:0000490;1.86e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.74e-20,114;UBERON:0004638,5.95e-19,18;UBERON:0001986,5.95e-19,18;UBERON:0004852,5.95e-19,18;UBERON:0000487,1.55e-14,22;UBERON:0006914,3.57e-12,25;UBERON:0001009,2.13e-11,112;UBERON:0003915,9.04e-10,9;UBERON:0004700,9.04e-10,9;UBERON:0001917,9.04e-10,9;UBERON:0004535,9.84e-10,109;UBERON:0000055,2.40e-09,68;UBERON:0007500,2.86e-07,59;UBERON:0001981,2.86e-07,59;UBERON:0004537,2.86e-07,59;UBERON:0006965,2.86e-07,59;UBERON:0002049,3.67e-07,78;UBERON:0007798,3.67e-07,78;UBERON:0004872,4.78e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.157421562627358,0.393364276848904,2.68680578668049,0.309632246632152,0,0,0,0,0,0.587200878669695,0.553995408531877,0.200544447470142,0.651032612147555,0.223915474239924,2.59114932815184,1.03030227053675,1.16318591023652,0.755751887377619,0.727752183563449,0.464858073811369,0,0,0,0.512321413058201,0.945928919554341,0.689491361473237,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,0.290209238628584,0,0,0.75374599577023,0,0,0,0,0,1.90129757680748,1.27562579979026,0.838634582033504,0.336985893439485,0.750884464207532,0.64290234678832,2.28010194992999,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0.786021525498329,2.67281948699362,2.34061093546949,8.14805666583976,8.99550830895993,13.6378709885538,4.2335973616366,5.00830042707223,3.32300841875432,4.33286182024025,3.0741916734162,3.25148368899696,14.1416597959161,11.3303507292198,4.63684937176084,5.19002971067211,4.0131124213457,9.40819714244791,5.32553910678561,4.98186641682498,3.77990190030893,5.81945291644857,14.9725744732325,9.11516835398986,14.2567806667256,2.55977702432214,3.32765189001488,12.4930726552346,19.1789574155654,10.6746639599736,1.81446068902259,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0.174129737299267,0,0,0,0,4.96906018416763,2.58070378531837,6.59566953054429,5.6530794192401,2.93649605346934,2.75118041940067,1.8809546988313,4.65150166504792,2.49036383880697,4.01664735317604,1.20848795132744,2.28081631715554,8.54217201418593,0.367663080345869,4.0507097394088,3.92918804449951,2.91888184414021,1.68917220724983,1.53316637465883,1.89853131913626,2.5648244150257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,1.40241773803446,0.4115740113314,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,1.44366447761074,0.462985512576611,3.42457474022277,0,0,0.492434012174795,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,1.18218456121156,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.94142780736755,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,2.15915916102139,4.62681758070868,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,1.01489521846434,0.764637207142375,5.12682468456746,8.33811214102261,6.9931586424653,0.648473311192717,1.08006287447623,4.75875105776562,0,0,0,0,0,0.213425530045242,0.478278818186467,0.199579371432817,1.7235483311913,1.05836791361941,0,0.280797178113459,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12778627451629,0,0,0,0,0,0,0,0.844016498463076,0,0,0,1.79323189425963,3.03912307084262,0,0,0,0,0,0,0,0.789147245095469,0,0,1.93866549219044,0.463840490809256,0,0,0,2.89999830173917,0,0,0,0,0,0,0,1.68835014075571,0,0.663475559587348,0,1.09692698576986,0,0,3.00106008164809,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.76915129006678,1.83309043480088,0,0,0,0.606610196826093,1.60515529459758,1.1713222286267,0,0,0,0.789168805698781,3.62972148145992,0.61214552326098,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.484945082442097,0,1.12990370390266,0,0,0.633107959558787,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,3.6306712165393,4.35404805622199,5.74298419661451,1.59743200399193,4.29226048136571,3.12440040418622,2.14987111957524,0,0,0,0,0,0,0.0846733320657845,0,1.36203406111576,0,0,0,0,0,0.607495566580247,0,1.97014268247995,0.944182586429966,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,1.31897010310274,1.32506888912221,0.646414781807753,0.39669780522807,0,0,2.88326013932776,0.314408610199332,9.5274982729855,8.93098839261511,0,0,0,1.63205341010842,1.2534494701135,0.612691153526923,2.29510841496863,0,0,0.488105059607853,1.3771002377715,0,1.44207766997908,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.389720617678777,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.638535436228605,2.2562800066483,0.504143392443436,0.622415272177961,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.810451015420736,0,0.826747186004736,0.887821342714695,1.09394961803644,1.09651553371436,3.96968942711435,0,0,0,1.008851166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| |||
|short_description=p3@GIMAP6 | |||
}} |
Latest revision as of 03:36, 17 September 2015
Short description: | p3@GIMAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GIMAP6_5end |
Coexpression cluster: | C1092_Hepatic_CD8_CD4_Endothelial_Renal_lymph_spleen |
Association with transcript: | 0bp_to_ENST00000477013_5end |
EntrezGene: | GIMAP6 |
HGNC: | 21918 |
UniProt: | C9JPL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.35e-24 | 36 |
endothelial cell of vascular tree | 2.89e-23 | 24 |
blood vessel endothelial cell | 5.95e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.95e-19 | 18 |
meso-epithelial cell | 8.76e-18 | 45 |
mature alpha-beta T cell | 5.94e-16 | 18 |
alpha-beta T cell | 5.94e-16 | 18 |
immature T cell | 5.94e-16 | 18 |
mature T cell | 5.94e-16 | 18 |
immature alpha-beta T cell | 5.94e-16 | 18 |
CD8-positive, alpha-beta T cell | 6.09e-15 | 11 |
lining cell | 8.01e-12 | 58 |
barrier cell | 8.01e-12 | 58 |
T cell | 3.53e-10 | 25 |
pro-T cell | 3.53e-10 | 25 |
endothelial cell of artery | 9.04e-10 | 9 |
vein endothelial cell | 1.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.74e-20 | 114 |
blood vessel endothelium | 5.95e-19 | 18 |
endothelium | 5.95e-19 | 18 |
cardiovascular system endothelium | 5.95e-19 | 18 |
simple squamous epithelium | 1.55e-14 | 22 |
squamous epithelium | 3.57e-12 | 25 |
circulatory system | 2.13e-11 | 112 |
endothelial tube | 9.04e-10 | 9 |
arterial system endothelium | 9.04e-10 | 9 |
endothelium of artery | 9.04e-10 | 9 |
cardiovascular system | 9.84e-10 | 109 |
vessel | 2.40e-09 | 68 |
epithelial tube open at both ends | 2.86e-07 | 59 |
blood vessel | 2.86e-07 | 59 |
blood vasculature | 2.86e-07 | 59 |
vascular cord | 2.86e-07 | 59 |
vasculature | 3.67e-07 | 78 |
vascular system | 3.67e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 4.78e-07 | 83 |