FFCP PHASE1:Hg19::chr7:150264470..150264501,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:150264470..150264501,+
|short_description=p1@GIMAP4
|description=CAGE_peak_1_at_GIMAP4_5end
|association_with_transcript=0bp_to_ENST00000466938,ENST0000047...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55303 | |EntrezGene=55303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21872 | |HGNC=21872 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWN0 | |UniProt=B4DWN0 | ||
|association_with_transcript=0bp_to_ENST00000466938,ENST00000478135,ENST00000494750_5end | |||
|cluster_id=chr7:150264470..150264501,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_GIMAP4_5end | |||
|id=chr7:150264470..150264501,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.56e-25!119;CL:0000738!9.99e-25!140;CL:0002031!4.49e-20!124;CL:0000766!1.10e-18!76;CL:0002057!3.49e-18!42;CL:0002194!5.89e-17!63;CL:0000576!5.89e-17!63;CL:0000040!5.89e-17!63;CL:0000559!5.89e-17!63;CL:0000860!6.88e-16!45;CL:0002009!7.72e-16!65;CL:0000115!7.77e-16!35;CL:0002139!4.52e-15!24;CL:0000037!9.01e-15!172;CL:0000566!9.01e-15!172;CL:0002032!2.43e-14!165;CL:0000837!2.43e-14!165;CL:0000839!7.06e-14!70;CL:0000557!2.02e-13!71;CL:0000791!4.25e-13!18;CL:0000789!4.25e-13!18;CL:0002420!4.25e-13!18;CL:0002419!4.25e-13!18;CL:0000790!4.25e-13!18;CL:0000988!1.31e-12!182;CL:0000071!4.60e-11!18;CL:0002546!4.60e-11!18;CL:0002078!1.57e-10!44;CL:0000084!1.19e-09!25;CL:0000827!1.19e-09!25;CL:0000625!1.41e-09!11;CL:0000542!1.12e-07!53;CL:0000051!1.12e-07!53;CL:0000838!1.26e-07!52;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.98e-16;24!CL:0000115;1.54e-14;36!CL:0000791;7.42e-14;18!CL:0000789;7.42e-14;18!CL:0002419;7.42e-14;18!CL:0000473;4.32e-13;39!CL:0000234;4.32e-13;39!CL:0000576;6.46e-13;48!CL:0000860;8.39e-13;33!CL:0002057;8.39e-13;33!CL:0000071;1.11e-11;18!CL:0000625;4.16e-10;11!CL:0000766;1.20e-09;69!CL:0000084;4.46e-09;25!CL:0002087;1.43e-07;104!CL:0002078;1.68e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.48e-24,115;CL:0000738,7.15e-23,136;CL:0000473,6.37e-22,48;CL:0000234,6.37e-22,48;CL:0000766,2.23e-21,72;CL:0002194,3.73e-20,59;CL:0000576,3.73e-20,59;CL:0000040,3.73e-20,59;CL:0000559,3.73e-20,59;CL:0000860,2.98e-19,42;CL:0002057,2.98e-19,42;CL:0002031,5.28e-19,120;CL:0002009,7.03e-19,61;CL:0000115,5.54e-17,36;CL:0000839,4.56e-16,66;CL:0002139,6.13e-16,24;CL:0000557,1.46e-15,67;CL:0000791,7.72e-14,18;CL:0000789,7.72e-14,18;CL:0002420,7.72e-14,18;CL:0002419,7.72e-14,18;CL:0000790,7.72e-14,18;CL:0000037,8.40e-13,168;CL:0002032,2.73e-12,161;CL:0000837,2.73e-12,161;CL:0000071,1.13e-11,18;CL:0002546,1.13e-11,18;CL:0002078,4.53e-11,45;CL:0000988,8.44e-11,177;CL:0000625,4.31e-10,11;CL:0000084,4.63e-09,25;CL:0000827,4.63e-09,25;CL:0000763,6.46e-08,108;CL:0000049,6.46e-08,108;CL:0002393,7.13e-07,9;CL:0002397,7.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-14;42!CL:0000790;7.42e-14;18!CL:0002546;1.11e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-43!115;UBERON:0002193!4.43e-21!112;UBERON:0002390!1.45e-17!102;UBERON:0003061!1.45e-17!102;UBERON:0002405!8.25e-14!115;UBERON:0003081!5.11e-13!216;UBERON:0001049!1.35e-11!57;UBERON:0005068!1.35e-11!57;UBERON:0006241!1.35e-11!57;UBERON:0007135!1.35e-11!57;UBERON:0001986!4.60e-11!18;UBERON:0004638!4.60e-11!18;UBERON:0004852!4.60e-11!18;UBERON:0002371!2.21e-10!80;UBERON:0003080!1.64e-09!42;UBERON:0002780!5.16e-09!41;UBERON:0001890!5.16e-09!41;UBERON:0006240!5.16e-09!41;UBERON:0002616!1.39e-08!59;UBERON:0001474!1.65e-08!86;UBERON:0000487!1.98e-08!22;UBERON:0002020!2.02e-07!34;UBERON:0003528!2.02e-07!34;UBERON:0006914!3.39e-07!25;UBERON:0001893!3.44e-07!34;UBERON:0000178!4.80e-07!15;UBERON:0000179!4.80e-07!15;UBERON:0000463!4.80e-07!15;UBERON:0002791!5.21e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-11;18!UBERON:0001986;1.11e-11;18!UBERON:0004852;1.11e-11;18!UBERON:0007023;1.22e-11;114!UBERON:0000487;2.46e-08;22!UBERON:0000178;1.50e-07;15!UBERON:0000179;1.50e-07;15!UBERON:0000463;1.50e-07;15!UBERON:0002780;1.94e-07;41!UBERON:0001890;1.94e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-45,114;UBERON:0002193,3.25e-24,108;UBERON:0002390,2.76e-20,98;UBERON:0003061,2.76e-20,98;UBERON:0002405,3.62e-18,93;UBERON:0003081,4.60e-16,203;UBERON:0002371,3.41e-12,76;UBERON:0001049,6.08e-12,56;UBERON:0005068,6.08e-12,56;UBERON:0006241,6.08e-12,56;UBERON:0007135,6.08e-12,56;UBERON:0004638,1.13e-11,18;UBERON:0001986,1.13e-11,18;UBERON:0004852,1.13e-11,18;UBERON:0000073,6.96e-11,53;UBERON:0002616,6.96e-11,53;UBERON:0001474,4.03e-10,82;UBERON:0002780,1.26e-09,41;UBERON:0001890,1.26e-09,41;UBERON:0003080,1.26e-09,41;UBERON:0006240,1.26e-09,41;UBERON:0000487,2.49e-08,22;UBERON:0003528,6.26e-08,34;UBERON:0002020,6.26e-08,34;UBERON:0004765,6.82e-08,90;UBERON:0001893,1.11e-07,34;UBERON:0000178,1.53e-07,15;UBERON:0000179,1.53e-07,15;UBERON:0000463,1.53e-07,15;UBERON:0002791,3.41e-07,32;UBERON:0000955,5.06e-07,68;UBERON:0006238,5.06e-07,68;UBERON:0001869,6.27e-07,32;UBERON:0003075,8.91e-07,82;UBERON:0007284,8.91e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.157421562627358,6.68719270643137,17.2723229143746,10.8371286321253,0,0,0,0,0,0,9.41792194504192,7.42014455639524,8.24641308720237,61.3528399417393,41.1344955844104,74.6969146139141,29.5158424722516,15.87078963493,22.8029017516547,8.13501629169896,7.40102198439286,6.81354015969228,16.6861587546847,18.6997315766243,17.0267205519781,7.92915065694223,10.973239620925,6.77132432971709,7.52969358170419,4.91231070104122,7.86532195557796,7.03992952453076,7.38136762275015,4.47535988059329,42.8806690242731,37.6986312904884,32.8193057910174,6.67481248845743,8.5107783703671,7.4738669879469,10.3011952755265,17.7304192262868,18.4610517999349,10.2917915447673,8.47038562771399,8.86094684834476,71.1930314871244,89.7190145852484,97.7009288069032,74.8108683435657,92.0584353118434,83.0951283223904,50.447255642201,91.3027548343824,85.4868239618487,0,3.27683166757279,1.77901850772711,6.82768356106412,0.800791974072025,3.4485146397269,5.94940385506376,0,0,0,0.382273228125229,0,2.80254281490768,1.05353633910031,18.4907183907003,12.1833336452241,10.6912779479745,45.4747267462644,85.7175561246343,135.406072440134,89.6202950676392,69.297304182578,46.2531274735494,99.6902525626295,80.4287475382096,75.4457873184227,62.8186648714212,121.68404940672,78.2070550333951,74.4793930339085,122.781274298186,131.362546592049,83.6284190439814,117.048551006586,126.462762888634,193.462251806721,158.643346896228,287.346003720335,272.152883711983,327.905955334689,144.70268943374,145.776750104883,206.135698811371,310.414977429706,286.573670925445,21.1687080385969,12.5696892018248,14.3376159843971,0,1.34140171940727,4.85877735005415,0,0,0,0,0,0,0,0.263504357079378,11.5916481815476,0,0,4.86821090482025,5.39802185627728,8.50930947320737,0.238490624305342,2.28797964312051,0,19.4787159219371,11.1830497363796,23.2584136077088,2.82653970962005,6.29249154314859,50.3466016750323,26.7513557167118,53.4922691480511,51.2303418268863,65.6052401018754,14.5018554159293,28.8903400173035,43.198984186026,19.8538063386769,29.9752520716251,159.221415530514,95.6495127387483,95.044089527924,29.1301611185178,26.5794384679076,47.8156551658363,28.9916918359339,50.4114343392823,0,0,0,0,0,1.77334191099179,0,1.06748995729705,0,0,0.538842688278752,0.326923806226917,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,2.80483547606892,0,0,1.26755034821831,8.84544495009863,15.3605375737165,0,0,0,0,0,0,0,0,0,0,0,0,43.0212014328,32.4089858803627,63.7351409985904,0,0,32.254427797449,11.7002132569619,27.0508715365485,0,0,0,0,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,5.21177894869976,0,0,0,0,0,4.86495122564762,18.5835123829887,12.6500363689819,0,0,0,0,0,0,13.0018767032492,25.2199373058467,17.0345784139019,26.3103224373484,0.254094624222463,0,0,0.670065061337395,0,66.6616251312992,50.8574480646842,80.8110251200269,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,35.1505644408909,17.0414218646707,21.9858769075095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,3.4120015221269,3.57196781080683,43.6150150526322,18.5072703228347,0,0,0,0,0,0,0,0,0,0,24.6268017838056,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,3.0982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,24.5715320027394,0,0,0,0,74.0873509478967,76.4637207142375,138.993913670496,172.241573655981,148.501780584116,56.4171780737664,57.7833637844783,140.383156204086,0,0,0,0.185803175125719,0,0.0711418433484141,22.1602519093063,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,47.4686500840937,0,0,0,0.23874448473769,0.296964680832639,0,9.94147647766298,18.4276935497772,0,0,0,13.9473591775749,29.0098111307705,0,0,0,0,0,0,0,22.5893398908578,91.0035750918371,0,5.81599647657131,8.62743312905217,3.99227596002388,0,0,32.6249808945657,0,0,0,0,0,0,10.6288966297661,15.677537021303,6.10326945268333,6.19243855614858,2.65992857058193,5.92340572315726,0,0,22.1616744490936,0.113942055847001,0,0,0,3.82801391678303,0.0915975934018623,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,18.4876309811979,14.0536933334734,0,0,0,10.0427688141209,21.6695964770673,7.96499115466153,0,0,0,7.49710365413842,9.67925728389311,2.14250933141343,24.0109002588254,0,0,0,0,0,0,0,0,0,0,0,14.3275867958465,0,0,0,0,14.8393195227282,0,9.94315259434343,0,0,6.33107959558787,0,0,8.96502577905281,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,24.2322520638828,0,0,0,15.9190968725185,17.416192224888,25.8434288847653,5.79069101447074,11.5891032996874,31.467175499304,17.1317854841152,0,0,0,0,0,0,4.99572659188128,8.74752658790234,21.6563415717405,0,0,0,0,0,5.71045832585432,0,19.4650097029019,7.23873316262974,0,0,0,19.296773812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| ||
|short_description=p1@GIMAP4 | |||
}} | }} |
Latest revision as of 03:30, 17 September 2015
Short description: | p1@GIMAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GIMAP4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000466938, ENST00000478135, ENST00000494750_5end |
EntrezGene: | GIMAP4 |
HGNC: | 21872 |
UniProt: | B4DWN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-45 | 114 |
hemolymphoid system | 3.25e-24 | 108 |
hematopoietic system | 2.76e-20 | 98 |
blood island | 2.76e-20 | 98 |
immune system | 3.62e-18 | 93 |
lateral plate mesoderm | 4.60e-16 | 203 |
bone marrow | 3.41e-12 | 76 |
neural tube | 6.08e-12 | 56 |
neural rod | 6.08e-12 | 56 |
future spinal cord | 6.08e-12 | 56 |
neural keel | 6.08e-12 | 56 |
blood vessel endothelium | 1.13e-11 | 18 |
endothelium | 1.13e-11 | 18 |
cardiovascular system endothelium | 1.13e-11 | 18 |
regional part of nervous system | 6.96e-11 | 53 |
regional part of brain | 6.96e-11 | 53 |
bone element | 4.03e-10 | 82 |
regional part of forebrain | 1.26e-09 | 41 |
forebrain | 1.26e-09 | 41 |
anterior neural tube | 1.26e-09 | 41 |
future forebrain | 1.26e-09 | 41 |
simple squamous epithelium | 2.49e-08 | 22 |
brain grey matter | 6.26e-08 | 34 |
gray matter | 6.26e-08 | 34 |
skeletal element | 6.82e-08 | 90 |
telencephalon | 1.11e-07 | 34 |
blood | 1.53e-07 | 15 |
haemolymphatic fluid | 1.53e-07 | 15 |
organism substance | 1.53e-07 | 15 |
regional part of telencephalon | 3.41e-07 | 32 |
brain | 5.06e-07 | 68 |
future brain | 5.06e-07 | 68 |
cerebral hemisphere | 6.27e-07 | 32 |
neural plate | 8.91e-07 | 82 |
presumptive neural plate | 8.91e-07 | 82 |