FFCP PHASE1:Hg19::chr7:150264435..150264467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55303 | |EntrezGene=55303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21872 | |HGNC=21872 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9W9,Q9NUV9 | |UniProt=G5E9W9,Q9NUV9 | ||
|association_with_transcript=0bp_to_ENST00000461940,NM_018326,uc003whl.2,uc011kuu.1,uc011kuv.1_5end | |association_with_transcript=0bp_to_ENST00000461940,NM_018326,uc003whl.2,uc011kuu.1,uc011kuv.1_5end | ||
|cluster_id=chr7:150264435..150264467,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_GIMAP4_5end | |description=CAGE_peak_2_at_GIMAP4_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.16e-31!140;CL:0002087!3.56e-31!119;CL:0002031!2.80e-26!124;CL:0000766!7.20e-24!76;CL:0002194!1.27e-21!63;CL:0000576!1.27e-21!63;CL:0000040!1.27e-21!63;CL:0000559!1.27e-21!63;CL:0002057!2.31e-20!42;CL:0002009!2.70e-20!65;CL:0000037!6.57e-20!172;CL:0000566!6.57e-20!172;CL:0002032!8.35e-19!165;CL:0000837!8.35e-19!165;CL:0000839!1.39e-18!70;CL:0000557!5.04e-18!71;CL:0000860!7.06e-18!45;CL:0000988!1.65e-17!182;CL:0000115!1.02e-15!35;CL:0000791!2.08e-14!18;CL:0000789!2.08e-14!18;CL:0002420!2.08e-14!18;CL:0002419!2.08e-14!18;CL:0000790!2.08e-14!18;CL:0002139!4.41e-14!24;CL:0002078!1.51e-10!44;CL:0000763!1.58e-10!112;CL:0000049!1.58e-10!112;CL:0000071!2.43e-10!18;CL:0002546!2.43e-10!18;CL:0000625!4.34e-10!11;CL:0000084!5.00e-10!25;CL:0000827!5.00e-10!25;CL:0000838!4.36e-09!52;CL:0000542!1.09e-08!53;CL:0000051!1.09e-08!53;CL:0002393!2.30e-07!9;CL:0002397!2.30e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.16e-31!140;CL:0002087!3.56e-31!119;CL:0002031!2.80e-26!124;CL:0000766!7.20e-24!76;CL:0002194!1.27e-21!63;CL:0000576!1.27e-21!63;CL:0000040!1.27e-21!63;CL:0000559!1.27e-21!63;CL:0002057!2.31e-20!42;CL:0002009!2.70e-20!65;CL:0000037!6.57e-20!172;CL:0000566!6.57e-20!172;CL:0002032!8.35e-19!165;CL:0000837!8.35e-19!165;CL:0000839!1.39e-18!70;CL:0000557!5.04e-18!71;CL:0000860!7.06e-18!45;CL:0000988!1.65e-17!182;CL:0000115!1.02e-15!35;CL:0000791!2.08e-14!18;CL:0000789!2.08e-14!18;CL:0002420!2.08e-14!18;CL:0002419!2.08e-14!18;CL:0000790!2.08e-14!18;CL:0002139!4.41e-14!24;CL:0002078!1.51e-10!44;CL:0000763!1.58e-10!112;CL:0000049!1.58e-10!112;CL:0000071!2.43e-10!18;CL:0002546!2.43e-10!18;CL:0000625!4.34e-10!11;CL:0000084!5.00e-10!25;CL:0000827!5.00e-10!25;CL:0000838!4.36e-09!52;CL:0000542!1.09e-08!53;CL:0000051!1.09e-08!53;CL:0002393!2.30e-07!9;CL:0002397!2.30e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.40e-16;39!CL:0000234;6.40e-16;39!CL:0000791;1.05e-15;18!CL:0000789;1.05e-15;18!CL:0002419;1.05e-15;18!CL:0002139;2.94e-15;24!CL:0000115;3.02e-15;36!CL:0000576;6.66e-15;48!CL:0000860;1.16e-14;33!CL:0002057;1.16e-14;33!CL:0000766;1.33e-11;69!CL:0000071;3.89e-11;18!CL:0000625;6.12e-11;11!CL:0000084;1.71e-10;25!CL:0002087;4.79e-09;104!CL:0002078;5.52e-08;45 | |ontology_enrichment_celltype_v019=CL:0000473;6.40e-16;39!CL:0000234;6.40e-16;39!CL:0000791;1.05e-15;18!CL:0000789;1.05e-15;18!CL:0002419;1.05e-15;18!CL:0002139;2.94e-15;24!CL:0000115;3.02e-15;36!CL:0000576;6.66e-15;48!CL:0000860;1.16e-14;33!CL:0002057;1.16e-14;33!CL:0000766;1.33e-11;69!CL:0000071;3.89e-11;18!CL:0000625;6.12e-11;11!CL:0000084;1.71e-10;25!CL:0002087;4.79e-09;104!CL:0002078;5.52e-08;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.52e-31,115;CL:0000738,9.12e-30,136;CL:0000766,1.81e-27,72;CL:0002194,1.77e-26,59;CL:0000576,1.77e-26,59;CL:0000040,1.77e-26,59;CL:0000559,1.77e-26,59;CL:0000473,1.90e-26,48;CL:0000234,1.90e-26,48;CL:0002031,3.55e-25,120;CL:0002009,6.02e-25,61;CL:0000860,2.66e-22,42;CL:0002057,2.66e-22,42;CL:0000839,1.48e-21,66;CL:0000557,6.07e-21,67;CL:0000115,5.72e-18,36;CL:0000037,6.53e-18,168;CL:0002032,4.31e-17,161;CL:0000837,4.31e-17,161;CL:0000791,9.91e-16,18;CL:0000789,9.91e-16,18;CL:0002420,9.91e-16,18;CL:0002419,9.91e-16,18;CL:0000790,9.91e-16,18;CL:0000988,1.73e-15,177;CL:0002139,2.27e-15,24;CL:0002078,6.20e-12,45;CL:0000763,2.41e-11,108;CL:0000049,2.41e-11,108;CL:0000071,3.04e-11,18;CL:0002546,3.04e-11,18;CL:0000625,5.75e-11,11;CL:0000084,1.62e-10,25;CL:0000827,1.62e-10,25;CL:0002393,5.79e-08,9;CL:0002397,5.79e-08,9;CL:0000213,6.67e-07,58;CL:0000215,6.67e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-16;42!CL:0000790;1.05e-15;18!CL:0002546;3.89e-11;18 | |ontology_enrichment_development_v019=CL:0002057;3.02e-16;42!CL:0000790;1.05e-15;18!CL:0002546;3.89e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.01e-36!115;UBERON:0002193!2.41e-28!112;UBERON:0002390!5.62e-24!102;UBERON:0003061!5.62e-24!102;UBERON:0002405!1.27e-18!115;UBERON:0003081!4.12e-15!216;UBERON:0002371!5.58e-15!80;UBERON:0001474!1.52e-12!86;UBERON:0001986!2.43e-10!18;UBERON:0004638!2.43e-10!18;UBERON:0004852!2.43e-10!18;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0004765!8.06e-09!101;UBERON:0001434!8.06e-09!101;UBERON:0003080!2.86e-08!42;UBERON:0002780!7.59e-08!41;UBERON:0001890!7.59e-08!41;UBERON:0006240!7.59e-08!41;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15;UBERON:0000487!2.92e-07!22;UBERON:0002616!6.39e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!7.01e-36!115;UBERON:0002193!2.41e-28!112;UBERON:0002390!5.62e-24!102;UBERON:0003061!5.62e-24!102;UBERON:0002405!1.27e-18!115;UBERON:0003081!4.12e-15!216;UBERON:0002371!5.58e-15!80;UBERON:0001474!1.52e-12!86;UBERON:0001986!2.43e-10!18;UBERON:0004638!2.43e-10!18;UBERON:0004852!2.43e-10!18;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0004765!8.06e-09!101;UBERON:0001434!8.06e-09!101;UBERON:0003080!2.86e-08!42;UBERON:0002780!7.59e-08!41;UBERON:0001890!7.59e-08!41;UBERON:0006240!7.59e-08!41;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15;UBERON:0000487!2.92e-07!22;UBERON:0002616!6.39e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.89e-11;18!UBERON:0001986;3.89e-11;18!UBERON:0004852;3.89e-11;18!UBERON:0007023;2.53e-09;114!UBERON:0000178;2.22e-08;15!UBERON:0000179;2.22e-08;15!UBERON:0000463;2.22e-08;15!UBERON:0000487;5.18e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.89e-11;18!UBERON:0001986;3.89e-11;18!UBERON:0004852;3.89e-11;18!UBERON:0007023;2.53e-09;114!UBERON:0000178;2.22e-08;15!UBERON:0000179;2.22e-08;15!UBERON:0000463;2.22e-08;15!UBERON:0000487;5.18e-08;22 | ||
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| ||
|short_description=p2@GIMAP4 | |short_description=p2@GIMAP4 | ||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p2@GIMAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GIMAP4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000461940, NM_018326, uc003whl.2, uc011kuu.1, uc011kuv.1_5end |
EntrezGene: | GIMAP4 |
HGNC: | 21872 |
UniProt: | G5E9W9Q9NUV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.23e-36 | 114 |
hemolymphoid system | 5.86e-31 | 108 |
hematopoietic system | 9.29e-27 | 98 |
blood island | 9.29e-27 | 98 |
immune system | 8.84e-24 | 93 |
lateral plate mesoderm | 2.09e-18 | 203 |
bone marrow | 4.55e-17 | 76 |
bone element | 1.76e-14 | 82 |
skeletal element | 1.18e-11 | 90 |
blood vessel endothelium | 3.04e-11 | 18 |
endothelium | 3.04e-11 | 18 |
cardiovascular system endothelium | 3.04e-11 | 18 |
skeletal system | 2.47e-09 | 100 |
neural tube | 8.53e-09 | 56 |
neural rod | 8.53e-09 | 56 |
future spinal cord | 8.53e-09 | 56 |
neural keel | 8.53e-09 | 56 |
blood | 2.24e-08 | 15 |
haemolymphatic fluid | 2.24e-08 | 15 |
organism substance | 2.24e-08 | 15 |
simple squamous epithelium | 4.31e-08 | 22 |
regional part of nervous system | 7.19e-08 | 53 |
regional part of brain | 7.19e-08 | 53 |
regional part of forebrain | 1.02e-07 | 41 |
forebrain | 1.02e-07 | 41 |
anterior neural tube | 1.02e-07 | 41 |
future forebrain | 1.02e-07 | 41 |