FFCP PHASE1:Hg19::chr7:150264435..150264467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55303 | |EntrezGene=55303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21872 | |HGNC=21872 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9W9,Q9NUV9 | |UniProt=G5E9W9,Q9NUV9 | ||
|association_with_transcript=0bp_to_ENST00000461940,NM_018326,uc003whl.2,uc011kuu.1,uc011kuv.1_5end | |association_with_transcript=0bp_to_ENST00000461940,NM_018326,uc003whl.2,uc011kuu.1,uc011kuv.1_5end | ||
|cluster_id=chr7:150264435..150264467,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_GIMAP4_5end | |description=CAGE_peak_2_at_GIMAP4_5end | ||
|id=chr7:150264435..150264467,+ | |id=chr7:150264435..150264467,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.16e-31!140;CL:0002087!3.56e-31!119;CL:0002031!2.80e-26!124;CL:0000766!7.20e-24!76;CL:0002194!1.27e-21!63;CL:0000576!1.27e-21!63;CL:0000040!1.27e-21!63;CL:0000559!1.27e-21!63;CL:0002057!2.31e-20!42;CL:0002009!2.70e-20!65;CL:0000037!6.57e-20!172;CL:0000566!6.57e-20!172;CL:0002032!8.35e-19!165;CL:0000837!8.35e-19!165;CL:0000839!1.39e-18!70;CL:0000557!5.04e-18!71;CL:0000860!7.06e-18!45;CL:0000988!1.65e-17!182;CL:0000115!1.02e-15!35;CL:0000791!2.08e-14!18;CL:0000789!2.08e-14!18;CL:0002420!2.08e-14!18;CL:0002419!2.08e-14!18;CL:0000790!2.08e-14!18;CL:0002139!4.41e-14!24;CL:0002078!1.51e-10!44;CL:0000763!1.58e-10!112;CL:0000049!1.58e-10!112;CL:0000071!2.43e-10!18;CL:0002546!2.43e-10!18;CL:0000625!4.34e-10!11;CL:0000084!5.00e-10!25;CL:0000827!5.00e-10!25;CL:0000838!4.36e-09!52;CL:0000542!1.09e-08!53;CL:0000051!1.09e-08!53;CL:0002393!2.30e-07!9;CL:0002397!2.30e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.16e-31!140;CL:0002087!3.56e-31!119;CL:0002031!2.80e-26!124;CL:0000766!7.20e-24!76;CL:0002194!1.27e-21!63;CL:0000576!1.27e-21!63;CL:0000040!1.27e-21!63;CL:0000559!1.27e-21!63;CL:0002057!2.31e-20!42;CL:0002009!2.70e-20!65;CL:0000037!6.57e-20!172;CL:0000566!6.57e-20!172;CL:0002032!8.35e-19!165;CL:0000837!8.35e-19!165;CL:0000839!1.39e-18!70;CL:0000557!5.04e-18!71;CL:0000860!7.06e-18!45;CL:0000988!1.65e-17!182;CL:0000115!1.02e-15!35;CL:0000791!2.08e-14!18;CL:0000789!2.08e-14!18;CL:0002420!2.08e-14!18;CL:0002419!2.08e-14!18;CL:0000790!2.08e-14!18;CL:0002139!4.41e-14!24;CL:0002078!1.51e-10!44;CL:0000763!1.58e-10!112;CL:0000049!1.58e-10!112;CL:0000071!2.43e-10!18;CL:0002546!2.43e-10!18;CL:0000625!4.34e-10!11;CL:0000084!5.00e-10!25;CL:0000827!5.00e-10!25;CL:0000838!4.36e-09!52;CL:0000542!1.09e-08!53;CL:0000051!1.09e-08!53;CL:0002393!2.30e-07!9;CL:0002397!2.30e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.40e-16;39!CL:0000234;6.40e-16;39!CL:0000791;1.05e-15;18!CL:0000789;1.05e-15;18!CL:0002419;1.05e-15;18!CL:0002139;2.94e-15;24!CL:0000115;3.02e-15;36!CL:0000576;6.66e-15;48!CL:0000860;1.16e-14;33!CL:0002057;1.16e-14;33!CL:0000766;1.33e-11;69!CL:0000071;3.89e-11;18!CL:0000625;6.12e-11;11!CL:0000084;1.71e-10;25!CL:0002087;4.79e-09;104!CL:0002078;5.52e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.52e-31,115;CL:0000738,9.12e-30,136;CL:0000766,1.81e-27,72;CL:0002194,1.77e-26,59;CL:0000576,1.77e-26,59;CL:0000040,1.77e-26,59;CL:0000559,1.77e-26,59;CL:0000473,1.90e-26,48;CL:0000234,1.90e-26,48;CL:0002031,3.55e-25,120;CL:0002009,6.02e-25,61;CL:0000860,2.66e-22,42;CL:0002057,2.66e-22,42;CL:0000839,1.48e-21,66;CL:0000557,6.07e-21,67;CL:0000115,5.72e-18,36;CL:0000037,6.53e-18,168;CL:0002032,4.31e-17,161;CL:0000837,4.31e-17,161;CL:0000791,9.91e-16,18;CL:0000789,9.91e-16,18;CL:0002420,9.91e-16,18;CL:0002419,9.91e-16,18;CL:0000790,9.91e-16,18;CL:0000988,1.73e-15,177;CL:0002139,2.27e-15,24;CL:0002078,6.20e-12,45;CL:0000763,2.41e-11,108;CL:0000049,2.41e-11,108;CL:0000071,3.04e-11,18;CL:0002546,3.04e-11,18;CL:0000625,5.75e-11,11;CL:0000084,1.62e-10,25;CL:0000827,1.62e-10,25;CL:0002393,5.79e-08,9;CL:0002397,5.79e-08,9;CL:0000213,6.67e-07,58;CL:0000215,6.67e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-16;42!CL:0000790;1.05e-15;18!CL:0002546;3.89e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.01e-36!115;UBERON:0002193!2.41e-28!112;UBERON:0002390!5.62e-24!102;UBERON:0003061!5.62e-24!102;UBERON:0002405!1.27e-18!115;UBERON:0003081!4.12e-15!216;UBERON:0002371!5.58e-15!80;UBERON:0001474!1.52e-12!86;UBERON:0001986!2.43e-10!18;UBERON:0004638!2.43e-10!18;UBERON:0004852!2.43e-10!18;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0004765!8.06e-09!101;UBERON:0001434!8.06e-09!101;UBERON:0003080!2.86e-08!42;UBERON:0002780!7.59e-08!41;UBERON:0001890!7.59e-08!41;UBERON:0006240!7.59e-08!41;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15;UBERON:0000487!2.92e-07!22;UBERON:0002616!6.39e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!7.01e-36!115;UBERON:0002193!2.41e-28!112;UBERON:0002390!5.62e-24!102;UBERON:0003061!5.62e-24!102;UBERON:0002405!1.27e-18!115;UBERON:0003081!4.12e-15!216;UBERON:0002371!5.58e-15!80;UBERON:0001474!1.52e-12!86;UBERON:0001986!2.43e-10!18;UBERON:0004638!2.43e-10!18;UBERON:0004852!2.43e-10!18;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0004765!8.06e-09!101;UBERON:0001434!8.06e-09!101;UBERON:0003080!2.86e-08!42;UBERON:0002780!7.59e-08!41;UBERON:0001890!7.59e-08!41;UBERON:0006240!7.59e-08!41;UBERON:0000178!1.55e-07!15;UBERON:0000179!1.55e-07!15;UBERON:0000463!1.55e-07!15;UBERON:0000487!2.92e-07!22;UBERON:0002616!6.39e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.89e-11;18!UBERON:0001986;3.89e-11;18!UBERON:0004852;3.89e-11;18!UBERON:0007023;2.53e-09;114!UBERON:0000178;2.22e-08;15!UBERON:0000179;2.22e-08;15!UBERON:0000463;2.22e-08;15!UBERON:0000487;5.18e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.23e-36,114;UBERON:0002193,5.86e-31,108;UBERON:0002390,9.29e-27,98;UBERON:0003061,9.29e-27,98;UBERON:0002405,8.84e-24,93;UBERON:0003081,2.09e-18,203;UBERON:0002371,4.55e-17,76;UBERON:0001474,1.76e-14,82;UBERON:0004765,1.18e-11,90;UBERON:0004638,3.04e-11,18;UBERON:0001986,3.04e-11,18;UBERON:0004852,3.04e-11,18;UBERON:0001434,2.47e-09,100;UBERON:0001049,8.53e-09,56;UBERON:0005068,8.53e-09,56;UBERON:0006241,8.53e-09,56;UBERON:0007135,8.53e-09,56;UBERON:0000178,2.24e-08,15;UBERON:0000179,2.24e-08,15;UBERON:0000463,2.24e-08,15;UBERON:0000487,4.31e-08,22;UBERON:0000073,7.19e-08,53;UBERON:0002616,7.19e-08,53;UBERON:0002780,1.02e-07,41;UBERON:0001890,1.02e-07,41;UBERON:0003080,1.02e-07,41;UBERON:0006240,1.02e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.157421562627358,5.50709987588466,9.21190555433311,11.4563931253896,0,0,0,0,0.426507697462265,0.293600439334847,6.09394949385065,11.0299446108578,7.37836960433896,56.202784034221,38.2194525902396,64.6514674761808,13.5220362064995,7.935394817465,13.8272914877055,4.18372266430232,2.46700732813095,2.47765096716083,7.48000220037591,11.5272317938095,11.3511470346521,3.44745680736619,7.74581620300591,14.8969135253776,6.21199720490596,4.36649840092553,5.16864014223695,4.89734227793444,3.53021929783703,3.19668562899521,24.7388475140037,13.1646014030277,17.0489900213078,4.35313857942876,4.53908179752912,1.24564449799115,8.29120595347253,7.82224377630302,9.55630916702513,3.02699751316684,3.31449872388808,2.53169909952708,51.3350345738019,67.1829587889538,62.8975936525128,39.0903636389803,61.2721722793346,50.6285598095802,29.6413253490899,63.2555033493107,61.0098273573877,0,3.82297027883492,0,4.26730222566507,0,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0,0,2.24203425192614,0.790152254325231,16.523620689562,11.3973121197258,16.8593229179598,54.6699839927517,52.4734849280081,73.8578576946184,75.9824240790854,73.9765433717553,50.3776101781972,91.2719645684519,79.3455320831496,73.3963262028119,60.6076559629033,83.5344555386675,78.7597550689668,70.7119529193528,75.9227203389749,74.3763502089402,70.0388009493344,79.0899212029012,54.4173100914728,85.2196064796922,81.7253605222994,111.497895013434,115.241771332586,113.103793289357,99.8313039485633,124.27499943094,113.686961162635,112.942749224996,105.925511602815,11.6931911070345,8.55808626507223,9.84805946403033,0,0,1.2786256184353,0,0,0,0,0,0,0,0.263504357079378,3.92937226493138,0,0,9.41187441598582,9.5771355514597,12.8969221703299,1.19245312152671,1.14398982156026,0,7.9504962946682,3.4409383804245,7.98423153697467,1.69592382577203,1.67799774483962,13.4807840550633,6.68783892917794,15.2465887909904,17.7883131343355,22.7610016679976,15.3075140501476,16.7259863258073,15.864033740631,19.8538063386769,10.5318453224629,50.5436462087891,27.8416422056451,29.5042078866304,13.7984973719295,7.59412527654503,13.5569290508501,9.22462922052443,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,2.80483547606892,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,15.591576358196,12.5006088395685,20.5474484413366,0,0,41.1182400165954,12.6362303175188,27.9426585102809,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,14.5654556515317,14.7583757638122,0,0,0,0,0,0,6.38885320763105,8.07826116827902,10.5657511681163,8.85566950330264,0.254094624222463,0,0,1.17261385734044,0,23.2192177423627,29.9161459204025,30.6667479942666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1881318139416,19.4142780736755,18.250412384389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68666920354483,10.2056223165909,13.3867867983326,9.25363516141736,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.844430541190656,0,0,0,0,0.670302275535787,0,9.32023627690114,0,0,0,0,72.057560510968,72.6405346785257,63.230837776332,80.7605718801905,71.988397790084,64.8473311192717,73.9843069016217,57.1050126931875,0,0,0,0,0,0,12.9135280910346,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,16.1158997199083,0,0,0,0.47748896947538,0.296964680832639,0,0,5.90811548924153,0,0,0,2.39097585901284,15.1956153542131,0,0,0,0,0,0,0,6.01724774385295,31.1328020051022,0,2.90799823828566,3.8034920246359,0,0,0,10.8749936315219,0,0,0,0,0,0,3.54296554325536,4.22087535188928,0,1.10579259931225,0.886642856860642,2.19385397153973,0,0,7.07942378234933,0.113942055847001,0,0,0,2.23300811812344,0.0915975934018623,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,6.5458597732471,6.11030144933625,0,0,0,6.60531103210635,2.40773294189637,5.15381780595746,0,0,0,3.15667522279512,10.8891644443797,0,8.71974798873134,0,0,0,0,0,0,0,0,0,0,0,8.56160674385948,0,0,0,0,5.72235197281675,0,3.84167259326905,0,0,4.49506651286739,0,0,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,4.80336230967832,8.89884962797955,0,0,0,6.7027776305341,4.58320848023367,4.30723814746088,1.79711100449092,3.004582336956,5.57928643604681,4.97157696401774,0,0,0,0,0,0,3.55627994676295,2.38568906942791,6.40156008724405,0.160753148465019,0,0,0,0,3.40197517284938,0,5.51639951094387,2.6751839948849,0,0,0,10.0057345692271,5.95882773328889,0,0,0,0,0,0,0,0.113312091520126,4.39656701034247,0,2.97350799631566,7.00832789236257,0,0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|short_description=p2@GIMAP4 | |short_description=p2@GIMAP4 | ||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p2@GIMAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GIMAP4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000461940, NM_018326, uc003whl.2, uc011kuu.1, uc011kuv.1_5end |
EntrezGene: | GIMAP4 |
HGNC: | 21872 |
UniProt: | G5E9W9Q9NUV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.23e-36 | 114 |
hemolymphoid system | 5.86e-31 | 108 |
hematopoietic system | 9.29e-27 | 98 |
blood island | 9.29e-27 | 98 |
immune system | 8.84e-24 | 93 |
lateral plate mesoderm | 2.09e-18 | 203 |
bone marrow | 4.55e-17 | 76 |
bone element | 1.76e-14 | 82 |
skeletal element | 1.18e-11 | 90 |
blood vessel endothelium | 3.04e-11 | 18 |
endothelium | 3.04e-11 | 18 |
cardiovascular system endothelium | 3.04e-11 | 18 |
skeletal system | 2.47e-09 | 100 |
neural tube | 8.53e-09 | 56 |
neural rod | 8.53e-09 | 56 |
future spinal cord | 8.53e-09 | 56 |
neural keel | 8.53e-09 | 56 |
blood | 2.24e-08 | 15 |
haemolymphatic fluid | 2.24e-08 | 15 |
organism substance | 2.24e-08 | 15 |
simple squamous epithelium | 4.31e-08 | 22 |
regional part of nervous system | 7.19e-08 | 53 |
regional part of brain | 7.19e-08 | 53 |
regional part of forebrain | 1.02e-07 | 41 |
forebrain | 1.02e-07 | 41 |
anterior neural tube | 1.02e-07 | 41 |
future forebrain | 1.02e-07 | 41 |