FFCP PHASE1:Hg19::chr3:184535104..184535116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23355 | |EntrezGene=23355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29122 | |HGNC=29122 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIA0 | |UniProt=C9JIA0 | ||
|association_with_transcript=10bp_to_ENST00000445089_5end | |association_with_transcript=10bp_to_ENST00000445089_5end | ||
|cluster_id=chr3:184535104..184535116,+ | |||
|description=CAGE_peak_5_at_VPS8_5end | |description=CAGE_peak_5_at_VPS8_5end | ||
|id=chr3:184535104..184535116,+ | |id=chr3:184535104..184535116,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.29e-13;2!DOID:1287;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.37e-13,2;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.51e-20!32;UBERON:0002791!1.17e-19!33;UBERON:0002020!4.99e-19!34;UBERON:0003528!4.99e-19!34;UBERON:0001893!4.99e-19!34;UBERON:0001950!1.84e-18!20;UBERON:0007023!1.75e-17!115;UBERON:0002619!9.98e-17!22;UBERON:0002780!1.84e-15!41;UBERON:0001890!1.84e-15!41;UBERON:0006240!1.84e-15!41;UBERON:0003080!4.79e-15!42;UBERON:0002420!1.02e-14!9;UBERON:0007245!1.02e-14!9;UBERON:0010009!1.02e-14!9;UBERON:0010011!1.02e-14!9;UBERON:0000454!1.02e-14!9;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000369!1.16e-12!4;UBERON:0002435!1.16e-12!4;UBERON:0000204!1.16e-12!4;UBERON:0010082!1.16e-12!4;UBERON:0001049!1.86e-12!57;UBERON:0005068!1.86e-12!57;UBERON:0006241!1.86e-12!57;UBERON:0007135!1.86e-12!57;UBERON:0000341!2.85e-12!2;UBERON:0001630!3.01e-12!2;UBERON:0005090!3.01e-12!2;UBERON:0002616!5.91e-12!59;UBERON:0001876!1.06e-11!2;UBERON:0000153!1.15e-11!129;UBERON:0007811!1.15e-11!129;UBERON:0003056!1.59e-11!61;UBERON:0000955!1.74e-11!69;UBERON:0006238!1.74e-11!69;UBERON:0001017!7.62e-11!82;UBERON:0001871!1.06e-10!7;UBERON:0003075!2.77e-10!86;UBERON:0007284!2.77e-10!86;UBERON:0005743!3.28e-10!86;UBERON:0000349!3.37e-10!5;UBERON:0002346!1.07e-09!90;UBERON:0000033!1.27e-09!123;UBERON:0000073!5.58e-09!94;UBERON:0001016!5.58e-09!94;UBERON:0001723!3.95e-08!3;UBERON:0001033!3.95e-08!3;UBERON:0010056!3.95e-08!3;UBERON:0005383!4.10e-08!3;UBERON:0005382!4.10e-08!3;UBERON:0009663!1.98e-07!7;UBERON:0002426!4.85e-07!1;UBERON:0003831!4.85e-07!1;UBERON:0003898!4.85e-07!1;UBERON:0004830!4.85e-07!1;UBERON:0001774!4.85e-07!1;UBERON:0003830!4.85e-07!1;UBERON:0005175!4.85e-07!1;UBERON:0003897!4.85e-07!1;UBERON:0001103!4.85e-07!1;UBERON:0010084!4.85e-07!1;UBERON:0004121!6.36e-07!169;UBERON:0002084!6.43e-07!1;UBERON:0002082!6.43e-07!1;UBERON:0004706!6.43e-07!1;UBERON:0005418!7.19e-07!1;UBERON:0001389!7.19e-07!1;UBERON:0000026!7.19e-07!1;UBERON:0008784!7.19e-07!1;UBERON:0006058!7.19e-07!1;UBERON:0003663!7.19e-07!1;UBERON:0001383!7.19e-07!1;UBERON:0004256!7.19e-07!1;UBERON:0002529!7.19e-07!1;UBERON:0004708!7.19e-07!1;UBERON:0002101!7.19e-07!1;UBERON:0004709!7.19e-07!1;UBERON:0003661!7.19e-07!1;UBERON:0002471!7.19e-07!1;UBERON:0004357!7.19e-07!1;UBERON:0009872!7.19e-07!1;UBERON:0004347!7.19e-07!1;UBERON:0005420!7.19e-07!1;UBERON:0005732!7.19e-07!1;UBERON:0006057!7.19e-07!1;UBERON:0000978!7.19e-07!1;UBERON:0002103!7.19e-07!1;UBERON:0001665!7.19e-07!1;UBERON:0003823!7.19e-07!1;UBERON:0000154!7.19e-07!1;UBERON:0005733!7.19e-07!1;UBERON:0005730!7.19e-07!1;UBERON:0001874!7.60e-07!1;UBERON:0000989!8.49e-07!1;UBERON:0008811!8.49e-07!1;UBERON:0006258!8.49e-07!1;UBERON:0005876!8.49e-07!1;UBERON:0004874!8.49e-07!1;UBERON:0007029!8.97e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!2.51e-20!32;UBERON:0002791!1.17e-19!33;UBERON:0002020!4.99e-19!34;UBERON:0003528!4.99e-19!34;UBERON:0001893!4.99e-19!34;UBERON:0001950!1.84e-18!20;UBERON:0007023!1.75e-17!115;UBERON:0002619!9.98e-17!22;UBERON:0002780!1.84e-15!41;UBERON:0001890!1.84e-15!41;UBERON:0006240!1.84e-15!41;UBERON:0003080!4.79e-15!42;UBERON:0002420!1.02e-14!9;UBERON:0007245!1.02e-14!9;UBERON:0010009!1.02e-14!9;UBERON:0010011!1.02e-14!9;UBERON:0000454!1.02e-14!9;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000369!1.16e-12!4;UBERON:0002435!1.16e-12!4;UBERON:0000204!1.16e-12!4;UBERON:0010082!1.16e-12!4;UBERON:0001049!1.86e-12!57;UBERON:0005068!1.86e-12!57;UBERON:0006241!1.86e-12!57;UBERON:0007135!1.86e-12!57;UBERON:0000341!2.85e-12!2;UBERON:0001630!3.01e-12!2;UBERON:0005090!3.01e-12!2;UBERON:0002616!5.91e-12!59;UBERON:0001876!1.06e-11!2;UBERON:0000153!1.15e-11!129;UBERON:0007811!1.15e-11!129;UBERON:0003056!1.59e-11!61;UBERON:0000955!1.74e-11!69;UBERON:0006238!1.74e-11!69;UBERON:0001017!7.62e-11!82;UBERON:0001871!1.06e-10!7;UBERON:0003075!2.77e-10!86;UBERON:0007284!2.77e-10!86;UBERON:0005743!3.28e-10!86;UBERON:0000349!3.37e-10!5;UBERON:0002346!1.07e-09!90;UBERON:0000033!1.27e-09!123;UBERON:0000073!5.58e-09!94;UBERON:0001016!5.58e-09!94;UBERON:0001723!3.95e-08!3;UBERON:0001033!3.95e-08!3;UBERON:0010056!3.95e-08!3;UBERON:0005383!4.10e-08!3;UBERON:0005382!4.10e-08!3;UBERON:0009663!1.98e-07!7;UBERON:0002426!4.85e-07!1;UBERON:0003831!4.85e-07!1;UBERON:0003898!4.85e-07!1;UBERON:0004830!4.85e-07!1;UBERON:0001774!4.85e-07!1;UBERON:0003830!4.85e-07!1;UBERON:0005175!4.85e-07!1;UBERON:0003897!4.85e-07!1;UBERON:0001103!4.85e-07!1;UBERON:0010084!4.85e-07!1;UBERON:0004121!6.36e-07!169;UBERON:0002084!6.43e-07!1;UBERON:0002082!6.43e-07!1;UBERON:0004706!6.43e-07!1;UBERON:0005418!7.19e-07!1;UBERON:0001389!7.19e-07!1;UBERON:0000026!7.19e-07!1;UBERON:0008784!7.19e-07!1;UBERON:0006058!7.19e-07!1;UBERON:0003663!7.19e-07!1;UBERON:0001383!7.19e-07!1;UBERON:0004256!7.19e-07!1;UBERON:0002529!7.19e-07!1;UBERON:0004708!7.19e-07!1;UBERON:0002101!7.19e-07!1;UBERON:0004709!7.19e-07!1;UBERON:0003661!7.19e-07!1;UBERON:0002471!7.19e-07!1;UBERON:0004357!7.19e-07!1;UBERON:0009872!7.19e-07!1;UBERON:0004347!7.19e-07!1;UBERON:0005420!7.19e-07!1;UBERON:0005732!7.19e-07!1;UBERON:0006057!7.19e-07!1;UBERON:0000978!7.19e-07!1;UBERON:0002103!7.19e-07!1;UBERON:0001665!7.19e-07!1;UBERON:0003823!7.19e-07!1;UBERON:0000154!7.19e-07!1;UBERON:0005733!7.19e-07!1;UBERON:0005730!7.19e-07!1;UBERON:0001874!7.60e-07!1;UBERON:0000989!8.49e-07!1;UBERON:0008811!8.49e-07!1;UBERON:0006258!8.49e-07!1;UBERON:0005876!8.49e-07!1;UBERON:0004874!8.49e-07!1;UBERON:0007029!8.97e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.09e-49;2!UBERON:0002426;4.06e-26;1!UBERON:0003831;4.06e-26;1!UBERON:0003898;4.06e-26;1!UBERON:0004830;4.06e-26;1!UBERON:0003830;4.06e-26;1!UBERON:0005175;4.06e-26;1!UBERON:0001774;4.06e-26;1!UBERON:0001103;4.06e-26;1!UBERON:0000974;2.38e-17;6!UBERON:0001134;9.86e-15;16!UBERON:0002036;9.86e-15;16!UBERON:0005090;8.82e-14;2!UBERON:0001630;8.82e-14;2!UBERON:0001876;1.29e-13;2!UBERON:0002385;3.60e-08;31!UBERON:0001015;3.60e-08;31!UBERON:0000383;3.60e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.40e-49,2;UBERON:0002426,4.61e-26,1;UBERON:0003831,4.61e-26,1;UBERON:0003898,4.61e-26,1;UBERON:0004830,4.61e-26,1;UBERON:0003830,4.61e-26,1;UBERON:0005175,4.61e-26,1;UBERON:0001774,4.61e-26,1;UBERON:0001103,4.61e-26,1;UBERON:0010084,4.61e-26,1;UBERON:0005090,9.40e-14,2;UBERON:0001630,9.40e-14,2;UBERON:0001876,1.07e-13,2;UBERON:0000974,8.47e-11,10 | |||
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|short_description=p5@VPS8 | |short_description=p5@VPS8 | ||
}} | }} |
Latest revision as of 02:57, 17 September 2015
Short description: | p5@VPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000445089_5end |
EntrezGene: | VPS8 |
HGNC: | 29122 |
UniProt: | C9JIA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.40e-49 | 2 |
chest muscle | 4.61e-26 | 1 |
respiratory system muscle | 4.61e-26 | 1 |
skeletal muscle of trunk | 4.61e-26 | 1 |
respiratory system skeletal muscle | 4.61e-26 | 1 |
thoracic segment muscle | 4.61e-26 | 1 |
chest organ | 4.61e-26 | 1 |
muscle of trunk | 4.61e-26 | 1 |
diaphragm | 4.61e-26 | 1 |
future diaphragm | 4.61e-26 | 1 |
muscle structure | 9.40e-14 | 2 |
muscle organ | 9.40e-14 | 2 |
amygdala | 1.07e-13 | 2 |
neck | 8.47e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.37e-13 | 2 |
cardiovascular system disease | 1.92e-07 | 4 |