FFCP PHASE1:Hg19::chr10:13141961..13141973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83643 | |EntrezGene=83643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23813 | |HGNC=23813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-248bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | |association_with_transcript=-248bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | ||
|cluster_id=chr10:13141961..13141973,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_6_at_CCDC3_5end | |description=CAGE_peak_6_at_CCDC3_5end | ||
|id=chr10:13141961..13141973,- | |id=chr10:13141961..13141973,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.29e-17;3!CL:0000047;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.11e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.23e-38;3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.20e-26!57;UBERON:0005068!5.20e-26!57;UBERON:0006241!5.20e-26!57;UBERON:0007135!5.20e-26!57;UBERON:0002616!3.55e-23!59;UBERON:0005743!6.29e-22!86;UBERON:0001017!9.65e-22!82;UBERON:0000073!1.57e-21!94;UBERON:0001016!1.57e-21!94;UBERON:0000955!4.74e-20!69;UBERON:0006238!4.74e-20!69;UBERON:0002780!3.24e-16!41;UBERON:0001890!3.24e-16!41;UBERON:0006240!3.24e-16!41;UBERON:0003075!9.50e-16!86;UBERON:0007284!9.50e-16!86;UBERON:0003080!1.41e-15!42;UBERON:0002020!2.74e-15!34;UBERON:0003528!2.74e-15!34;UBERON:0002791!1.91e-14!33;UBERON:0002346!2.49e-14!90;UBERON:0001893!9.07e-14!34;UBERON:0003076!1.95e-12!15;UBERON:0003057!1.95e-12!15;UBERON:0001869!2.57e-12!32;UBERON:0002619!3.79e-12!22;UBERON:0004733!4.04e-12!12;UBERON:0002028!4.04e-12!12;UBERON:0007277!4.04e-12!12;UBERON:0000956!4.13e-11!25;UBERON:0000203!4.13e-11!25;UBERON:0004732!7.29e-11!13;UBERON:0003056!1.39e-10!61;UBERON:0001950!2.08e-10!20;UBERON:0000033!5.87e-10!123;UBERON:0007023!8.85e-10!115;UBERON:0000153!9.27e-10!129;UBERON:0007811!9.27e-10!129;UBERON:0002680!1.01e-09!9;UBERON:0001895!1.01e-09!9;UBERON:0010092!1.01e-09!9;UBERON:0000025!1.77e-09!194;UBERON:0004111!2.74e-09!241;UBERON:0000477!3.14e-09!286;UBERON:0004121!1.65e-08!169;UBERON:0000924!6.43e-08!173;UBERON:0006601!6.43e-08!173;UBERON:0002037!1.58e-07!6;UBERON:0006215!1.58e-07!6;UBERON:0000119!2.12e-07!312;UBERON:0000483!3.86e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.57e-28;20!UBERON:0002619;8.12e-26;22!UBERON:0002021;6.33e-23;5!UBERON:0000956;8.72e-23;25!UBERON:0000203;8.72e-23;25!UBERON:0002037;1.46e-19;6!UBERON:0002791;2.26e-17;32!UBERON:0001869;3.34e-17;32!UBERON:0000073;7.52e-17;53!UBERON:0002616;7.52e-17;53!UBERON:0002780;6.65e-16;41!UBERON:0001890;6.65e-16;41!UBERON:0003528;7.69e-15;34!UBERON:0002020;7.69e-15;34!UBERON:0001893;9.88e-15;34!UBERON:0002680;2.97e-13;9!UBERON:0001895;2.97e-13;9!UBERON:0001016;3.49e-13;83!UBERON:0001872;5.16e-11;5!UBERON:0001017;2.64e-10;75!UBERON:0004733;4.41e-10;12!UBERON:0002028;4.41e-10;12!UBERON:0004732;2.39e-09;13!UBERON:0000955;3.47e-09;68!UBERON:0001871;5.66e-08;6!UBERON:0001876;1.81e-07;2!UBERON:0001897;1.81e-07;2!UBERON:0010225;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.23e-28,20;UBERON:0000073,1.70e-26,53;UBERON:0002616,1.70e-26,53;UBERON:0002619,7.13e-26,22;UBERON:0001049,4.90e-25,56;UBERON:0005068,4.90e-25,56;UBERON:0006241,4.90e-25,56;UBERON:0007135,4.90e-25,56;UBERON:0002021,5.46e-23,5;UBERON:0000956,7.77e-23,25;UBERON:0000203,7.77e-23,25;UBERON:0000955,3.76e-20,68;UBERON:0006238,3.76e-20,68;UBERON:0001017,4.61e-20,81;UBERON:0002037,1.42e-19,6;UBERON:0006215,1.42e-19,6;UBERON:0002780,4.61e-18,41;UBERON:0001890,4.61e-18,41;UBERON:0003080,4.61e-18,41;UBERON:0006240,4.61e-18,41;UBERON:0001016,5.85e-18,89;UBERON:0002791,6.88e-18,32;UBERON:0001869,6.88e-18,32;UBERON:0003528,7.75e-17,34;UBERON:0002020,7.75e-17,34;UBERON:0001893,7.75e-17,34;UBERON:0003075,8.62e-17,82;UBERON:0007284,8.62e-17,82;UBERON:0002346,5.87e-16,86;UBERON:0002680,2.91e-13,9;UBERON:0001895,2.91e-13,9;UBERON:0010092,2.91e-13,9;UBERON:0010371,5.45e-13,104;UBERON:0003056,5.49e-12,61;UBERON:0001872,4.79e-11,5;UBERON:0004733,4.34e-10,12;UBERON:0002028,4.34e-10,12;UBERON:0007277,4.34e-10,12;UBERON:0010314,5.82e-10,132;UBERON:0004732,2.36e-09,13;UBERON:0004121,8.98e-09,171;UBERON:0000924,8.98e-09,171;UBERON:0006601,8.98e-09,171;UBERON:0003076,3.56e-08,15;UBERON:0003057,3.56e-08,15;UBERON:0001871,5.66e-08,6;UBERON:0000025,8.85e-08,192;UBERON:0011216,1.27e-07,223;UBERON:0001876,2.12e-07,2;UBERON:0001897,2.40e-07,2;UBERON:0010225,2.40e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.994192127183747,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0.646882724578552,0.128343036279748,0.254094624222463,1.30139853857622,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0.788512075169673,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,1.26602474769461,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.60298219312704,3.05163472634166,3.20679853800551,1.47773809476774,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0,0,0,0.789168805698781,0,1.53036380815245,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.546746009922222,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.66116300871345,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.876336514945499,0.573409195690071,0.665574309221114,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,0,0,0,0,0,0,0.3062454773532,0.385375350578757,1.41696576325585,1.59633859057151,0.205116364240755,2.01657356977374,0.138314504928436,0.807378228159255,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.327543835020193,0.295712172434091,0,0,1.44680757550829,0.507326481551255,3.28184885410932,0,0,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0,0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| ||
|short_description=p6@CCDC3 | |short_description=p6@CCDC3 | ||
}} | }} |
Latest revision as of 02:46, 17 September 2015
Short description: | p6@CCDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCDC3_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | -248bp_to_uc001ilr.2, uc009xjc.1, uc009xjd.1_5end |
EntrezGene: | CCDC3 |
HGNC: | 23813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.11e-17 | 3 |