FFCP PHASE1:Hg19::chr11:1853029..1853045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-496bp_to_BC038591_5end | |association_with_transcript=-496bp_to_BC038591_5end | ||
|cluster_id=chr11:1853029..1853045,+ | |||
|coexpression_cluster_id=C154 | |coexpression_cluster_id=C154 | ||
|description=CAGE_peak_9_at_SYT8_5end | |description=CAGE_peak_9_at_SYT8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!9.58e-15!6;CL:0002541!2.79e-13!3 | |ontology_enrichment_celltype=CL:0000080!9.58e-15!6;CL:0002541!2.79e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.09e-10;3 | |ontology_enrichment_celltype_v019=CL:0002541;1.09e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.54e-29;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.54e-29;1 | ||
|ontology_enrichment_disease=DOID:178!2.74e-10!1;DOID:326!2.74e-10!1;DOID:3978!2.74e-10!1;DOID:3394!2.74e-10!1;DOID:5844!2.74e-10!1 | |ontology_enrichment_disease=DOID:178!2.74e-10!1;DOID:326!2.74e-10!1;DOID:3978!2.74e-10!1;DOID:3394!2.74e-10!1;DOID:5844!2.74e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.37e-15;2 | |ontology_enrichment_disease_v019=DOID:4929;2.37e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002331!2.61e-15!10;UBERON:0000358!2.61e-15!10;UBERON:0000307!2.61e-15!10;UBERON:0000091!2.61e-15!10;UBERON:0000087!2.61e-15!10;UBERON:0007806!2.61e-15!10;UBERON:0008780!2.61e-15!10;UBERON:0005728!2.61e-15!10;UBERON:0000478!1.35e-13!24;UBERON:0000476!2.79e-13!3;UBERON:0000920!2.79e-13!3;UBERON:0004913!1.19e-10!1;UBERON:0003703!1.19e-10!1;UBERON:0001174!1.19e-10!1;UBERON:0004914!1.19e-10!1;UBERON:0002171!1.57e-10!1;UBERON:0006518!1.57e-10!1;UBERON:0008949!1.57e-10!1;UBERON:0000101!1.57e-10!1;UBERON:0002167!1.57e-10!1 | |ontology_enrichment_uberon=UBERON:0002331!2.61e-15!10;UBERON:0000358!2.61e-15!10;UBERON:0000307!2.61e-15!10;UBERON:0000091!2.61e-15!10;UBERON:0000087!2.61e-15!10;UBERON:0007806!2.61e-15!10;UBERON:0008780!2.61e-15!10;UBERON:0005728!2.61e-15!10;UBERON:0000478!1.35e-13!24;UBERON:0000476!2.79e-13!3;UBERON:0000920!2.79e-13!3;UBERON:0004913!1.19e-10!1;UBERON:0003703!1.19e-10!1;UBERON:0001174!1.19e-10!1;UBERON:0004914!1.19e-10!1;UBERON:0002171!1.57e-10!1;UBERON:0006518!1.57e-10!1;UBERON:0008949!1.57e-10!1;UBERON:0000101!1.57e-10!1;UBERON:0002167!1.57e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.77e-45;10!UBERON:0000478;1.16e-29;24!UBERON:0004913;3.16e-29;1!UBERON:0003703;3.16e-29;1!UBERON:0001174;3.16e-29;1!UBERON:0004914;3.16e-29;1!UBERON:0000178;1.07e-17;15!UBERON:0000179;1.07e-17;15!UBERON:0000463;1.07e-17;15!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0002114;1.09e-10;2!UBERON:0002390;9.14e-09;32!UBERON:0002394;2.43e-08;4!UBERON:0003928;2.43e-08;4!UBERON:0000922;3.17e-08;49!UBERON:0002108;6.39e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.77e-45;10!UBERON:0000478;1.16e-29;24!UBERON:0004913;3.16e-29;1!UBERON:0003703;3.16e-29;1!UBERON:0001174;3.16e-29;1!UBERON:0004914;3.16e-29;1!UBERON:0000178;1.07e-17;15!UBERON:0000179;1.07e-17;15!UBERON:0000463;1.07e-17;15!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0002114;1.09e-10;2!UBERON:0002390;9.14e-09;32!UBERON:0002394;2.43e-08;4!UBERON:0003928;2.43e-08;4!UBERON:0000922;3.17e-08;49!UBERON:0002108;6.39e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.57e-45,10;UBERON:0000358,1.57e-45,10;UBERON:0000307,1.57e-45,10;UBERON:0000091,1.57e-45,10;UBERON:0000087,1.57e-45,10;UBERON:0007010,1.57e-45,10;UBERON:0007806,1.57e-45,10;UBERON:0008780,1.57e-45,10;UBERON:0005728,1.57e-45,10;UBERON:0000478,1.10e-29,24;UBERON:0004913,4.20e-29,1;UBERON:0003703,4.20e-29,1;UBERON:0001174,4.20e-29,1;UBERON:0004914,4.20e-29,1;UBERON:0000178,9.83e-18,15;UBERON:0000179,9.83e-18,15;UBERON:0000463,9.83e-18,15;UBERON:0000920,1.09e-10,3;UBERON:0002114,1.20e-10,2;UBERON:0002108,6.77e-07,4 | |||
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|short_description=p9@SYT8 | |short_description=p9@SYT8 | ||
}} | }} |
Latest revision as of 02:46, 17 September 2015
Short description: | p9@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYT8_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | -496bp_to_BC038591_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.57e-45 | 10 |
blastocyst | 1.57e-45 | 10 |
blastula | 1.57e-45 | 10 |
bilaminar disc | 1.57e-45 | 10 |
inner cell mass | 1.57e-45 | 10 |
cleaving embryo | 1.57e-45 | 10 |
connecting stalk | 1.57e-45 | 10 |
inner cell mass derived epiblast | 1.57e-45 | 10 |
extraembryonic mesoderm | 1.57e-45 | 10 |
extraembryonic structure | 1.10e-29 | 24 |
hepatopancreatic ampulla | 4.20e-29 | 1 |
extrahepatic bile duct | 4.20e-29 | 1 |
common bile duct | 4.20e-29 | 1 |
duodenal papilla | 4.20e-29 | 1 |
blood | 9.83e-18 | 15 |
haemolymphatic fluid | 9.83e-18 | 15 |
organism substance | 9.83e-18 | 15 |
egg chorion | 1.09e-10 | 3 |
duodenum | 1.20e-10 | 2 |
small intestine | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.74e-15 | 2 |