FFCP PHASE1:Hg19::chr1:152009431..152009457,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:152009431..152009457,-
|short_description=p2@S100A11
|description=CAGE_peak_2_at_S100A11_5end
|association_with_transcript=53bp_to_ENST00000271638,NM_00562...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6282 | |EntrezGene=6282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10488 | |HGNC=10488 | ||
|TSSclassifier=strong | |||
|UniProt=P31949 | |UniProt=P31949 | ||
|association_with_transcript=53bp_to_ENST00000271638,NM_005620,uc001ezn.2_5end | |||
|cluster_id=chr1:152009431..152009457,- | |||
|description=CAGE_peak_2_at_S100A11_5end | |||
|id=chr1:152009431..152009457,- | |||
|ontology_enrichment_celltype=CL:0000548!5.30e-34!679;CL:0000004!5.30e-34!679;CL:0000255!5.30e-34!679;CL:0000012!1.22e-32!682;CL:0002371!1.88e-25!591;CL:0000003!7.48e-25!722;CL:0000144!2.90e-24!625;CL:0000063!1.82e-21!578;CL:0000860!1.50e-12!45;CL:0002057!4.13e-12!42;CL:0002194!7.76e-12!63;CL:0000576!7.76e-12!63;CL:0000040!7.76e-12!63;CL:0000559!7.76e-12!63;CL:0002009!4.11e-11!65;CL:0000766!4.84e-11!76;CL:0000066!1.41e-10!254;CL:0000055!6.69e-10!180;CL:0000839!2.84e-09!70;CL:0000557!3.03e-09!71;CL:0000220!7.54e-09!246;CL:0002321!2.35e-08!248;CL:0000192!2.63e-08!42;CL:0000514!2.63e-08!42;CL:0002076!7.58e-08!43;CL:0000359!1.93e-07!32;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0000183!3.19e-07!59;CL:0000057!3.45e-07!75;CL:0000187!4.83e-07!54;CL:0000723!7.81e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-11;33!CL:0002057;2.54e-11;33!CL:0000473;1.15e-10;39!CL:0000234;1.15e-10;39!CL:0000349;1.85e-07;19!CL:0000359;4.29e-07;32!CL:0000576;7.92e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.79e-14,48;CL:0000234,8.79e-14,48;CL:0000860,4.13e-12,42;CL:0002057,4.13e-12,42;CL:0002194,1.98e-11,59;CL:0000576,1.98e-11,59;CL:0000040,1.98e-11,59;CL:0000559,1.98e-11,59;CL:0002009,1.07e-10,61;CL:0000766,1.32e-10,72;CL:0000066,1.38e-10,253;CL:0000839,7.65e-09,66;CL:0000557,8.10e-09,67;CL:0002321,2.48e-08,250;CL:0000192,3.55e-08,43;CL:0000514,3.55e-08,43;CL:0002076,1.11e-07,42;CL:0000349,1.84e-07,19;CL:0000359,1.93e-07,32;CL:0000680,2.46e-07,58;CL:0000056,2.46e-07,58;CL:0000355,2.46e-07,58;CL:0000057,3.54e-07,76;CL:0000187,5.78e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.25e-20!448;UBERON:0004120!2.25e-20!448;UBERON:0006603!2.25e-20!448;UBERON:0002204!4.78e-15!167;UBERON:0003081!3.22e-14!216;UBERON:0003102!5.74e-10!95;UBERON:0004765!1.94e-09!101;UBERON:0001434!1.94e-09!101;UBERON:0000486!2.00e-09!82;UBERON:0000467!3.48e-09!625;UBERON:0002371!4.03e-09!80;UBERON:0000468!4.58e-09!659;UBERON:0000480!4.68e-09!626;UBERON:0001474!2.20e-08!86;UBERON:0000914!2.04e-07!83;UBERON:0002329!2.04e-07!83;UBERON:0003077!2.04e-07!83;UBERON:0003059!2.04e-07!83;UBERON:0007282!2.04e-07!83;UBERON:0009618!2.04e-07!83;UBERON:0007285!2.04e-07!83;UBERON:0005631!5.33e-07!14;UBERON:0000158!5.33e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.11e-16,315;UBERON:0004120,6.11e-16,315;UBERON:0006603,6.11e-16,315;UBERON:0002204,3.11e-14,167;UBERON:0003081,3.06e-12,203;UBERON:0003102,2.10e-11,99;UBERON:0000486,2.35e-09,83;UBERON:0001434,1.00e-08,100;UBERON:0004765,1.04e-08,90;UBERON:0002371,1.09e-08,76;UBERON:0001474,5.82e-08,82;UBERON:0005631,5.33e-07,14;UBERON:0000158,5.33e-07,14 | |||
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| ||
|short_description=p2@S100A11 | |||
}} | }} |
Latest revision as of 02:44, 17 September 2015
Short description: | p2@S100A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A11_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000271638, NM_005620, uc001ezn.2_5end |
EntrezGene: | S100A11 |
HGNC: | 10488 |
UniProt: | P31949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.79e-14 | 48 |
phagocyte | 8.79e-14 | 48 |
classical monocyte | 4.13e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.13e-12 | 42 |
monopoietic cell | 1.98e-11 | 59 |
monocyte | 1.98e-11 | 59 |
monoblast | 1.98e-11 | 59 |
promonocyte | 1.98e-11 | 59 |
macrophage dendritic cell progenitor | 1.07e-10 | 61 |
myeloid leukocyte | 1.32e-10 | 72 |
epithelial cell | 1.38e-10 | 253 |
myeloid lineage restricted progenitor cell | 7.65e-09 | 66 |
granulocyte monocyte progenitor cell | 8.10e-09 | 67 |
embryonic cell | 2.48e-08 | 250 |
smooth muscle cell | 3.55e-08 | 43 |
smooth muscle myoblast | 3.55e-08 | 43 |
endo-epithelial cell | 1.11e-07 | 42 |
extraembryonic cell | 1.84e-07 | 19 |
vascular associated smooth muscle cell | 1.93e-07 | 32 |
muscle precursor cell | 2.46e-07 | 58 |
myoblast | 2.46e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.46e-07 | 58 |
fibroblast | 3.54e-07 | 76 |
muscle cell | 5.78e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.11e-16 | 315 |
mesoderm-derived structure | 6.11e-16 | 315 |
presumptive mesoderm | 6.11e-16 | 315 |
musculoskeletal system | 3.11e-14 | 167 |
lateral plate mesoderm | 3.06e-12 | 203 |
surface structure | 2.10e-11 | 99 |
multilaminar epithelium | 2.35e-09 | 83 |
skeletal system | 1.00e-08 | 100 |
skeletal element | 1.04e-08 | 90 |
bone marrow | 1.09e-08 | 76 |
bone element | 5.82e-08 | 82 |
extraembryonic membrane | 5.33e-07 | 14 |
membranous layer | 5.33e-07 | 14 |