FFCP PHASE1:Hg19::chr20:52790691..52790695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1591 | |EntrezGene=1591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2602 | |HGNC=2602 | ||
|TSSclassifier=strong | |||
|UniProt=Q07973,Q32ML3 | |UniProt=Q07973,Q32ML3 | ||
|association_with_transcript=-175bp_to_NM_000782,NM_001128915,uc002xwv.2,uc002xww.2_5end | |association_with_transcript=-175bp_to_NM_000782,NM_001128915,uc002xwv.2,uc002xww.2_5end | ||
|cluster_id=chr20:52790691..52790695,- | |||
|coexpression_cluster_id=C556 | |coexpression_cluster_id=C556 | ||
|description=CAGE_peak_5_at_CYP24A1_5end | |description=CAGE_peak_5_at_CYP24A1_5end | ||
|id=chr20:52790691..52790695,- | |id=chr20:52790691..52790695,- | ||
|ontology_enrichment_celltype=CL:0002586!2.74e-13!3;CL:0000066!5.97e-12!254;CL:0000223!3.41e-10!59;CL:0000149!4.53e-10!4;CL:0002076!5.36e-09!43;CL:0002368!2.92e-07!13 | |ontology_enrichment_celltype=CL:0002586!2.74e-13!3;CL:0000066!5.97e-12!254;CL:0000223!3.41e-10!59;CL:0000149!4.53e-10!4;CL:0002076!5.36e-09!43;CL:0002368!2.92e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.53e-44;3!CL:0000149;9.88e-34;4!CL:0002621;2.89e-12;3!CL:0000147;1.99e-10;14!CL:0002251;1.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.22e-44,3;CL:0000149,8.36e-34,4;CL:0002621,2.89e-12,3;CL:0000147,1.90e-10,14;CL:0002251,1.29e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.43e-09!106 | |ontology_enrichment_disease=DOID:305!6.43e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!2.74e-13!3;UBERON:0001782!2.74e-13!3;UBERON:0005424!2.74e-13!3;UBERON:0007625!8.62e-13!11;UBERON:0004119!1.88e-11!169;UBERON:0000925!1.88e-11!169;UBERON:0006595!1.88e-11!169;UBERON:0000020!5.10e-10!23;UBERON:0001007!7.29e-10!155;UBERON:0001555!7.29e-10!155;UBERON:0007026!7.29e-10!155;UBERON:0000065!1.27e-09!53;UBERON:0001032!1.52e-09!24;UBERON:0004456!1.52e-09!24;UBERON:0000063!6.11e-09!97;UBERON:0001041!9.39e-09!98;UBERON:0004921!2.33e-08!129;UBERON:0004185!2.33e-08!129;UBERON:0000072!3.92e-08!46;UBERON:0000966!3.93e-08!5;UBERON:0005388!3.93e-08!5;UBERON:0001802!3.93e-08!5;UBERON:0001004!1.38e-07!72;UBERON:0000077!2.21e-07!130;UBERON:0000019!4.09e-07!19;UBERON:0000047!4.09e-07!19;UBERON:0004088!4.09e-07!19;UBERON:0003072!4.09e-07!19;UBERON:0003071!4.09e-07!19;UBERON:0004128!4.09e-07!19 | |ontology_enrichment_uberon=UBERON:0001781!2.74e-13!3;UBERON:0001782!2.74e-13!3;UBERON:0005424!2.74e-13!3;UBERON:0007625!8.62e-13!11;UBERON:0004119!1.88e-11!169;UBERON:0000925!1.88e-11!169;UBERON:0006595!1.88e-11!169;UBERON:0000020!5.10e-10!23;UBERON:0001007!7.29e-10!155;UBERON:0001555!7.29e-10!155;UBERON:0007026!7.29e-10!155;UBERON:0000065!1.27e-09!53;UBERON:0001032!1.52e-09!24;UBERON:0004456!1.52e-09!24;UBERON:0000063!6.11e-09!97;UBERON:0001041!9.39e-09!98;UBERON:0004921!2.33e-08!129;UBERON:0004185!2.33e-08!129;UBERON:0000072!3.92e-08!46;UBERON:0000966!3.93e-08!5;UBERON:0005388!3.93e-08!5;UBERON:0001802!3.93e-08!5;UBERON:0001004!1.38e-07!72;UBERON:0000077!2.21e-07!130;UBERON:0000019!4.09e-07!19;UBERON:0000047!4.09e-07!19;UBERON:0004088!4.09e-07!19;UBERON:0003072!4.09e-07!19;UBERON:0003071!4.09e-07!19;UBERON:0004128!4.09e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.53e-44;3!UBERON:0001782;1.53e-44;3!UBERON:0000966;3.11e-27;5!UBERON:0005388;3.11e-27;5!UBERON:0001802;3.11e-27;5!UBERON:0006562;5.48e-18;2!UBERON:0007625;5.42e-13;11!UBERON:0001949;2.89e-12;3!UBERON:0010371;1.25e-10;31!UBERON:0000019;6.15e-08;19!UBERON:0000047;6.15e-08;19!UBERON:0004088;6.15e-08;19!UBERON:0010230;6.15e-08;19!UBERON:0000970;1.38e-07;20!UBERON:0002104;2.86e-07;21!UBERON:0001456;2.86e-07;21!UBERON:0004807;5.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.22e-44,3;UBERON:0005424,1.22e-44,3;UBERON:0001781,8.36e-34,4;UBERON:0000966,6.07e-23,6;UBERON:0005388,6.07e-23,6;UBERON:0001802,6.07e-23,6;UBERON:0007625,5.10e-13,11;UBERON:0001949,2.89e-12,3;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0001456,5.40e-07,22;UBERON:0001444,8.74e-07,49 | |||
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| ||
|short_description=p5@CYP24A1 | |short_description=p5@CYP24A1 | ||
}} | }} |
Latest revision as of 02:33, 17 September 2015
Short description: | p5@CYP24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYP24A1_5end |
Coexpression cluster: | C556_pharyngeal_Gingival_Retinal_lung_Mallassezderived_Small_mesothelioma |
Association with transcript: | -175bp_to_NM_000782, NM_001128915, uc002xwv.2, uc002xww.2_5end |
EntrezGene: | CYP24A1 |
HGNC: | 2602 |
UniProt: | Q07973Q32ML3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.22e-44 | 3 |
visual pigment cell | 8.36e-34 | 4 |
gingival epithelial cell | 2.89e-12 | 3 |
pigment cell | 1.90e-10 | 14 |
epithelial cell of alimentary canal | 1.29e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.22e-44 | 3 |
presumptive retinal pigmented epithelium | 1.22e-44 | 3 |
layer of retina | 8.36e-34 | 4 |
retina | 6.07e-23 | 6 |
photoreceptor array | 6.07e-23 | 6 |
posterior segment of eyeball | 6.07e-23 | 6 |
pigment epithelium of eye | 5.10e-13 | 11 |
gingival epithelium | 2.89e-12 | 3 |
camera-type eye | 1.33e-07 | 20 |
simple eye | 1.33e-07 | 20 |
immature eye | 1.33e-07 | 20 |
ocular region | 1.33e-07 | 20 |
eyeball of camera-type eye | 1.33e-07 | 20 |
optic cup | 1.33e-07 | 20 |
optic vesicle | 1.33e-07 | 20 |
eye primordium | 1.33e-07 | 20 |
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
face | 5.40e-07 | 22 |
subdivision of head | 8.74e-07 | 49 |