FFCP PHASE1:Hg19::chr8:145729510..145729532,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4552 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000354769,ENST00000531330,ENST00000534702_5end | |||
|cluster_id=chr8:145729510..145729532,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_GPT_5end | |||
|id=chr8:145729510..145729532,+ | |||
|ontology_enrichment_celltype=CL:0000136!7.18e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.04e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.01e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.68e-09;82!UBERON:0003104;3.82e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-62!115;UBERON:0001049!1.02e-27!57;UBERON:0005068!1.02e-27!57;UBERON:0006241!1.02e-27!57;UBERON:0007135!1.02e-27!57;UBERON:0002616!3.77e-22!59;UBERON:0003080!1.02e-21!42;UBERON:0002780!4.85e-21!41;UBERON:0001890!4.85e-21!41;UBERON:0006240!4.85e-21!41;UBERON:0003075!1.50e-20!86;UBERON:0007284!1.50e-20!86;UBERON:0000955!2.80e-20!69;UBERON:0006238!2.80e-20!69;UBERON:0002346!1.35e-19!90;UBERON:0001017!2.86e-19!82;UBERON:0005743!1.30e-18!86;UBERON:0001893!3.30e-18!34;UBERON:0002020!5.86e-18!34;UBERON:0003528!5.86e-18!34;UBERON:0002791!1.58e-17!33;UBERON:0001869!1.03e-16!32;UBERON:0000073!2.95e-15!94;UBERON:0001016!2.95e-15!94;UBERON:0000062!2.85e-14!511;UBERON:0003056!5.97e-14!61;UBERON:0000153!7.66e-14!129;UBERON:0007811!7.66e-14!129;UBERON:0000033!2.28e-13!123;UBERON:0002619!5.71e-13!22;UBERON:0000956!9.46e-12!25;UBERON:0000203!9.46e-12!25;UBERON:0001950!2.10e-11!20;UBERON:0004121!7.84e-10!169;UBERON:0000924!1.41e-09!173;UBERON:0006601!1.41e-09!173;UBERON:0004111!5.61e-09!241;UBERON:0000468!1.65e-08!659;UBERON:0002420!3.54e-08!9;UBERON:0007245!3.54e-08!9;UBERON:0010009!3.54e-08!9;UBERON:0010011!3.54e-08!9;UBERON:0000454!3.54e-08!9;UBERON:0002308!5.22e-08!9;UBERON:0000125!5.22e-08!9;UBERON:0000025!7.13e-08!194;UBERON:0000481!1.36e-07!347;UBERON:0000467!1.46e-07!625;UBERON:0000480!1.77e-07!626;UBERON:0000923!2.40e-07!604;UBERON:0005291!2.40e-07!604;UBERON:0006598!2.40e-07!604;UBERON:0002532!2.40e-07!604;UBERON:0000922!2.62e-07!612;UBERON:0002050!2.90e-07!605;UBERON:0005423!2.90e-07!605;UBERON:0000477!3.33e-07!286;UBERON:0003076!3.36e-07!15;UBERON:0003057!3.36e-07!15;UBERON:0002298!4.53e-07!8;UBERON:0001044!7.36e-07!6;UBERON:0003293!7.36e-07!6;UBERON:0003294!7.36e-07!6;UBERON:0010047!7.36e-07!6;UBERON:0000167!7.36e-07!6;UBERON:0009663!8.03e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.04e-17;34!UBERON:0007023;3.06e-16;114!UBERON:0001869;1.21e-15;32!UBERON:0002791;1.27e-15;32!UBERON:0003528;3.67e-15;34!UBERON:0002020;3.67e-15;34!UBERON:0000073;1.67e-14;53!UBERON:0002616;1.67e-14;53!UBERON:0002619;1.80e-14;22!UBERON:0002780;2.56e-14;41!UBERON:0001890;2.56e-14;41!UBERON:0000956;2.82e-12;25!UBERON:0000203;2.82e-12;25!UBERON:0001950;3.00e-12;20!UBERON:0001017;1.10e-08;75!UBERON:0000955;3.11e-08;68!UBERON:0002420;2.35e-07;9!UBERON:0007245;2.35e-07;9!UBERON:0010009;2.35e-07;9!UBERON:0010011;2.35e-07;9!UBERON:0000454;2.35e-07;9!UBERON:0009663;2.94e-07;7!UBERON:0001044;3.14e-07;6!UBERON:0003293;3.14e-07;6!UBERON:0003294;3.14e-07;6!UBERON:0010047;3.14e-07;6!UBERON:0003408;3.14e-07;6!UBERON:0000167;3.14e-07;6!UBERON:0000125;3.32e-07;9!UBERON:0002308;3.32e-07;9!UBERON:0004921;5.35e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-61,114;UBERON:0001049,2.96e-26,56;UBERON:0005068,2.96e-26,56;UBERON:0006241,2.96e-26,56;UBERON:0007135,2.96e-26,56;UBERON:0000073,6.87e-25,53;UBERON:0002616,6.87e-25,53;UBERON:0003075,1.50e-20,82;UBERON:0007284,1.50e-20,82;UBERON:0002780,8.26e-20,41;UBERON:0001890,8.26e-20,41;UBERON:0003080,8.26e-20,41;UBERON:0006240,8.26e-20,41;UBERON:0001893,1.28e-19,34;UBERON:0000955,3.52e-19,68;UBERON:0006238,3.52e-19,68;UBERON:0002346,4.81e-19,86;UBERON:0003528,8.67e-18,34;UBERON:0002020,8.67e-18,34;UBERON:0001017,9.38e-18,81;UBERON:0002791,1.42e-17,32;UBERON:0001869,1.57e-17,32;UBERON:0001016,6.38e-15,89;UBERON:0010371,8.77e-15,104;UBERON:0002619,2.88e-14,22;UBERON:0011216,1.14e-13,223;UBERON:0010314,3.08e-13,132;UBERON:0003056,6.22e-13,61;UBERON:0000956,4.22e-12,25;UBERON:0000203,4.22e-12,25;UBERON:0001950,4.52e-12,20;UBERON:0004121,1.38e-11,171;UBERON:0000924,1.38e-11,171;UBERON:0006601,1.38e-11,171;UBERON:0004111,4.32e-10,240;UBERON:0000025,2.42e-09,192;UBERON:0003076,1.26e-07,15;UBERON:0003057,1.26e-07,15;UBERON:0002420,1.80e-07,9;UBERON:0007245,1.80e-07,9;UBERON:0010009,1.80e-07,9;UBERON:0010011,1.80e-07,9;UBERON:0000454,1.80e-07,9;UBERON:0009663,2.13e-07,7;UBERON:0000125,2.40e-07,9;UBERON:0002308,2.40e-07,9;UBERON:0001044,2.79e-07,6;UBERON:0003293,2.79e-07,6;UBERON:0003294,2.79e-07,6;UBERON:0010047,2.79e-07,6;UBERON:0000167,2.79e-07,6;UBERON:0000369,9.85e-07,4;UBERON:0002435,9.85e-07,4;UBERON:0000204,9.85e-07,4;UBERON:0010082,9.85e-07,4 | |||
|phase1_expression=0.726713517082227,6.20891519283851,0.986680828671798,3.00219895059391,1.78784437770915,0.872338524100369,12.6649939084155,0.631719873426831,20.6336646277872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0.845021145247767,0.850417199860174,0,0,0,0,1.14005097496499,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.82343066232845,0,0,18.8237488319716,15.1492871450362,14.758333617594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,281.396177304465,14.7424082501644,36.0381843075657,0,0.860919069801795,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92001666944023,4.18296721639841,0,0,0,47.2958243463045,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,47.9191945953806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,1.23087398947712,0,0.33307196799782,0,1.8714054040822,9.23001529412932,0,0,0,0,0,1.22864280839693,0.994147647766298,2.53204949538923,0,0,0,1.39473591775749,11.6039244523082,0,0,0,0,0,0.358042349351218,0,0.295930216910801,0,0,1.93866549219044,1.02044907978036,0,0,0.0874599999961957,1.44999915086959,0,0.254253650292766,0.945550727071745,0,0,0,3.54296554325536,3.37670028151142,1.52581736317083,2.10100593869327,1.77328571372128,1.75508317723178,0,0,0.384751292518985,0,0,0.269272933229316,0,1.27600463892768,0,0.533034776018635,0,0.156980256395025,7.31331400360688,0,0,0,0,16.5294042139594,0,0,0,0,34.8341675877477,22.8220516418615,9.16545217400438,0,0,0,2.89824871816911,11.236087062183,2.81117334870407,0,0,0,5.91876604274086,1.20990716048664,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0,0,2.44617335538842,0,0.290268993867255,0.0730893170861856,0.410577285266046,1.35784623083787,0,0.225980740780532,0,0,2.089256266544,0.391102765469606,0,26.6816243424191,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,1.23214841002794,0,0,0,6.7027776305341,15.1245879847711,2.87149209830726,11.3817030284425,18.027494021736,24.3256888611641,2.8217058444425,0,0,1.18174773460835,1.2362378757175,1.01105315781277,0.0984274815147488,0,3.18091875923721,2.72406812223151,0,0,0,0.899895566206002,11.6070293183692,2.61223093629506,0,6.85609653503024,3.30463905250488,0,0,0,5.00286728461357,7.94510364438518,0,0,0,0,0,0,0,0,51.4398340210069,11.9256200020999,0.646414781807753,1.45455861916959,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,45.1534776796663,21.5593308859522,22.9759182572596,29.8364093945922,0,0.886068179966986,1.46431517882356,2.50381861413,1.14681839138014,1.66393577305278,3.35320575883471,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,2.95454435443714,0,1.27707087245721,1.02558182120378,0.252071696221718,2.35134658378341,2.90656162137332,0,0,0,0,0.115525666150338,0,0,3.38157577597667,0.0752103283492573,0,3.90757005616546,0,0,0,1.48582686160468,4.68646859168308,1.86018116851066,2.98054307911362,0,25.2198572754304,8.9318012110073,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,1.90315252335129,2.23627430113687,0,0.111231401892069,0.39246546425257,2.82808061848803,0,3.65263488203798,0,0,2.43020250200632,0.158013611732727,0,0,0,0.62164849248911,1.53646629384555,2.76503864725637,25.3834141703964,0,0,2.9637093513365,0,0,0,0,0.294450700845729,3.90137359943262,8.41657488344263,10.6769319130497,1.1598144313382,7.77137588894623,0,0,0,0.11294608203896,0,0,23.692466539139,0.437119121007915,0,0,0,0.785233868459781,1.18818560130834,3.8039015482506,0,0.0939839179798536,0.0644578879735772,0,0,0,0,2.92134555298607,26.1475691540588,1.86341458096887,0,2.24371917630019,0,3.1741610430924,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,2.37895890482359,12.3675709502569,0.23806443146374,0,0.186224142887574,0,0.763765899337979,0.606351566874658,17.4173398317569,6.16019941953506,4.3105313929336,3.72955468041917,4.65724499164419,0,0,0,0.0898252021065869,9.38563769613817,0.122241444182866,0,0.665756774185513,3.42165449104745,0 | |||
|short_description=p1@GPT | |||
}} |
Latest revision as of 02:17, 17 September 2015
Short description: | p1@GPT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000354769, ENST00000531330, ENST00000534702_5end |
EntrezGene: | GPT |
HGNC: | 4552 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.01e-08 | 15 |