FFCP PHASE1:Hg19::chr16:56651382..56651426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4500,4499 | |EntrezGene=4500,4499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=7404,14296 | |HGNC=7404,14296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_NR_001447,uc002ejj.3,uc010vhe.1_5end | |association_with_transcript=9bp_to_NR_001447,uc002ejj.3,uc010vhe.1_5end | ||
|cluster_id=chr16:56651382..56651426,+ | |||
|description=CAGE_peak_1_at_MT1L_5end,CAGE_peak_1_at_MT1M_5end | |description=CAGE_peak_1_at_MT1L_5end,CAGE_peak_1_at_MT1M_5end | ||
|id=chr16:56651382..56651426,+ | |id=chr16:56651382..56651426,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.99e-19!119;CL:0000680!5.68e-18!57;CL:0000056!5.68e-18!57;CL:0000355!5.68e-18!57;CL:0000183!7.22e-18!59;CL:0000187!3.74e-16!54;CL:0000055!2.88e-15!180;CL:0000192!1.73e-14!42;CL:0000514!1.73e-14!42;CL:0000220!5.02e-14!246;CL:0002321!1.18e-13!248;CL:0000393!1.37e-13!60;CL:0000211!1.37e-13!60;CL:1000497!8.63e-11!18;CL:0002518!8.63e-11!18;CL:0000359!3.82e-10!32;CL:1000449!4.75e-10!16;CL:0002681!3.94e-08!13;CL:0002584!3.94e-08!13;CL:1000507!4.17e-08!12;CL:1000494!4.17e-08!12;CL:0000115!8.33e-08!35;CL:0002371!1.38e-07!591;CL:0002139!1.97e-07!24;CL:0002078!3.35e-07!44 | |ontology_enrichment_celltype=CL:0000222!7.99e-19!119;CL:0000680!5.68e-18!57;CL:0000056!5.68e-18!57;CL:0000355!5.68e-18!57;CL:0000183!7.22e-18!59;CL:0000187!3.74e-16!54;CL:0000055!2.88e-15!180;CL:0000192!1.73e-14!42;CL:0000514!1.73e-14!42;CL:0000220!5.02e-14!246;CL:0002321!1.18e-13!248;CL:0000393!1.37e-13!60;CL:0000211!1.37e-13!60;CL:1000497!8.63e-11!18;CL:0002518!8.63e-11!18;CL:0000359!3.82e-10!32;CL:1000449!4.75e-10!16;CL:0002681!3.94e-08!13;CL:0002584!3.94e-08!13;CL:1000507!4.17e-08!12;CL:1000494!4.17e-08!12;CL:0000115!8.33e-08!35;CL:0002371!1.38e-07!591;CL:0002139!1.97e-07!24;CL:0002078!3.35e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.38e-11;17!CL:0002518;2.38e-11;17!CL:1000449;1.32e-10;15!CL:0000192;1.49e-10;43!CL:0000187;6.85e-10;55!CL:0000359;8.22e-10;32!CL:0002681;1.27e-08;12!CL:0002584;1.27e-08;12!CL:1000507;3.48e-08;10!CL:1000494;3.48e-08;10!CL:0002139;1.40e-07;24!CL:0000115;3.50e-07;36!CL:0000393;4.59e-07;61!CL:0000211;4.59e-07;61 | |ontology_enrichment_celltype_v019=CL:1000497;2.38e-11;17!CL:0002518;2.38e-11;17!CL:1000449;1.32e-10;15!CL:0000192;1.49e-10;43!CL:0000187;6.85e-10;55!CL:0000359;8.22e-10;32!CL:0002681;1.27e-08;12!CL:0002584;1.27e-08;12!CL:1000507;3.48e-08;10!CL:1000494;3.48e-08;10!CL:0002139;1.40e-07;24!CL:0000115;3.50e-07;36!CL:0000393;4.59e-07;61!CL:0000211;4.59e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.33e-20,121;CL:0000680,2.74e-18,58;CL:0000056,2.74e-18,58;CL:0000355,2.74e-18,58;CL:0000187,1.96e-16,55;CL:0002321,9.74e-15,250;CL:0000192,1.07e-14,43;CL:0000514,1.07e-14,43;CL:0000393,2.24e-13,61;CL:0000211,2.24e-13,61;CL:1000497,2.39e-11,17;CL:0002518,2.39e-11,17;CL:1000449,1.32e-10,15;CL:0000359,2.29e-10,32;CL:0002681,1.26e-08,12;CL:0002584,1.26e-08,12;CL:0000115,2.51e-08,36;CL:1000507,3.49e-08,10;CL:1000494,3.49e-08,10;CL:0002078,7.62e-08,45;CL:0002139,1.39e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.49e-10;43!CL:0000355;4.09e-10;58!CL:0000222;7.70e-07;121 | |ontology_enrichment_development_v019=CL:0000514;1.49e-10;43!CL:0000355;4.09e-10;58!CL:0000222;7.70e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.41e-29!312;UBERON:0000483!1.36e-27!309;UBERON:0005256!1.35e-25!143;UBERON:0000475!4.95e-24!365;UBERON:0000481!2.67e-22!347;UBERON:0000914!7.58e-22!83;UBERON:0002329!7.58e-22!83;UBERON:0003077!7.58e-22!83;UBERON:0003059!7.58e-22!83;UBERON:0007282!7.58e-22!83;UBERON:0009618!7.58e-22!83;UBERON:0007285!7.58e-22!83;UBERON:0002100!2.61e-21!216;UBERON:0003914!3.09e-21!118;UBERON:0000490!1.57e-20!138;UBERON:0002049!3.02e-20!79;UBERON:0007798!3.02e-20!79;UBERON:0000486!3.20e-20!82;UBERON:0004290!1.71e-19!70;UBERON:0004111!7.35e-19!241;UBERON:0000477!1.08e-18!286;UBERON:0001009!6.29e-17!113;UBERON:0001134!7.20e-17!61;UBERON:0002036!7.20e-17!61;UBERON:0003082!7.20e-17!61;UBERON:0002385!2.32e-16!63;UBERON:0001015!2.32e-16!63;UBERON:0000383!2.32e-16!63;UBERON:0004535!2.32e-16!110;UBERON:0000055!6.17e-16!69;UBERON:0000025!9.20e-16!194;UBERON:0003104!3.05e-14!238;UBERON:0009142!3.05e-14!238;UBERON:0001981!3.79e-14!60;UBERON:0007500!3.79e-14!60;UBERON:0004537!3.79e-14!60;UBERON:0006965!3.79e-14!60;UBERON:0000468!6.67e-14!659;UBERON:0004872!3.71e-13!84;UBERON:0000467!6.39e-13!625;UBERON:0000480!1.19e-12!626;UBERON:0000923!5.06e-11!604;UBERON:0005291!5.06e-11!604;UBERON:0006598!5.06e-11!604;UBERON:0002532!5.06e-11!604;UBERON:0001637!5.91e-11!42;UBERON:0003509!5.91e-11!42;UBERON:0004572!5.91e-11!42;UBERON:0002050!6.03e-11!605;UBERON:0005423!6.03e-11!605;UBERON:0000922!1.99e-10!612;UBERON:0004211!4.75e-10!16;UBERON:0001285!4.75e-10!16;UBERON:0007684!4.75e-10!16;UBERON:0003220!4.75e-10!16;UBERON:0004208!4.75e-10!16;UBERON:0006555!1.52e-09!17;UBERON:0005103!1.52e-09!17;UBERON:0000083!1.52e-09!17;UBERON:0009201!1.52e-09!17;UBERON:0004819!1.52e-09!17;UBERON:0006553!1.52e-09!17;UBERON:0003074!1.52e-09!17;UBERON:0003060!1.52e-09!17;UBERON:0004573!3.64e-09!33;UBERON:0004571!3.64e-09!33;UBERON:0000080!7.57e-09!18;UBERON:0002120!7.57e-09!18;UBERON:0004875!7.57e-09!18;UBERON:0005721!7.57e-09!18;UBERON:0005754!7.57e-09!18;UBERON:0007297!7.57e-09!18;UBERON:0004876!1.53e-08!20;UBERON:0003886!2.18e-08!63;UBERON:0003103!2.96e-08!69;UBERON:0001225!3.94e-08!13;UBERON:0008987!3.94e-08!13;UBERON:0009773!4.17e-08!12;UBERON:0001231!4.17e-08!12;UBERON:0004810!4.17e-08!12;UBERON:0000466!1.66e-07!126;UBERON:0002553!2.70e-07!70;UBERON:0000353!3.42e-07!17;UBERON:0003887!5.08e-07!21;UBERON:0000464!8.98e-07!104 | |ontology_enrichment_uberon=UBERON:0000119!4.41e-29!312;UBERON:0000483!1.36e-27!309;UBERON:0005256!1.35e-25!143;UBERON:0000475!4.95e-24!365;UBERON:0000481!2.67e-22!347;UBERON:0000914!7.58e-22!83;UBERON:0002329!7.58e-22!83;UBERON:0003077!7.58e-22!83;UBERON:0003059!7.58e-22!83;UBERON:0007282!7.58e-22!83;UBERON:0009618!7.58e-22!83;UBERON:0007285!7.58e-22!83;UBERON:0002100!2.61e-21!216;UBERON:0003914!3.09e-21!118;UBERON:0000490!1.57e-20!138;UBERON:0002049!3.02e-20!79;UBERON:0007798!3.02e-20!79;UBERON:0000486!3.20e-20!82;UBERON:0004290!1.71e-19!70;UBERON:0004111!7.35e-19!241;UBERON:0000477!1.08e-18!286;UBERON:0001009!6.29e-17!113;UBERON:0001134!7.20e-17!61;UBERON:0002036!7.20e-17!61;UBERON:0003082!7.20e-17!61;UBERON:0002385!2.32e-16!63;UBERON:0001015!2.32e-16!63;UBERON:0000383!2.32e-16!63;UBERON:0004535!2.32e-16!110;UBERON:0000055!6.17e-16!69;UBERON:0000025!9.20e-16!194;UBERON:0003104!3.05e-14!238;UBERON:0009142!3.05e-14!238;UBERON:0001981!3.79e-14!60;UBERON:0007500!3.79e-14!60;UBERON:0004537!3.79e-14!60;UBERON:0006965!3.79e-14!60;UBERON:0000468!6.67e-14!659;UBERON:0004872!3.71e-13!84;UBERON:0000467!6.39e-13!625;UBERON:0000480!1.19e-12!626;UBERON:0000923!5.06e-11!604;UBERON:0005291!5.06e-11!604;UBERON:0006598!5.06e-11!604;UBERON:0002532!5.06e-11!604;UBERON:0001637!5.91e-11!42;UBERON:0003509!5.91e-11!42;UBERON:0004572!5.91e-11!42;UBERON:0002050!6.03e-11!605;UBERON:0005423!6.03e-11!605;UBERON:0000922!1.99e-10!612;UBERON:0004211!4.75e-10!16;UBERON:0001285!4.75e-10!16;UBERON:0007684!4.75e-10!16;UBERON:0003220!4.75e-10!16;UBERON:0004208!4.75e-10!16;UBERON:0006555!1.52e-09!17;UBERON:0005103!1.52e-09!17;UBERON:0000083!1.52e-09!17;UBERON:0009201!1.52e-09!17;UBERON:0004819!1.52e-09!17;UBERON:0006553!1.52e-09!17;UBERON:0003074!1.52e-09!17;UBERON:0003060!1.52e-09!17;UBERON:0004573!3.64e-09!33;UBERON:0004571!3.64e-09!33;UBERON:0000080!7.57e-09!18;UBERON:0002120!7.57e-09!18;UBERON:0004875!7.57e-09!18;UBERON:0005721!7.57e-09!18;UBERON:0005754!7.57e-09!18;UBERON:0007297!7.57e-09!18;UBERON:0004876!1.53e-08!20;UBERON:0003886!2.18e-08!63;UBERON:0003103!2.96e-08!69;UBERON:0001225!3.94e-08!13;UBERON:0008987!3.94e-08!13;UBERON:0009773!4.17e-08!12;UBERON:0001231!4.17e-08!12;UBERON:0004810!4.17e-08!12;UBERON:0000466!1.66e-07!126;UBERON:0002553!2.70e-07!70;UBERON:0000353!3.42e-07!17;UBERON:0003887!5.08e-07!21;UBERON:0000464!8.98e-07!104 | ||
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|phase1_expression=58.5004381251192,61.8750514044941,74.5648797667687,148.108481562633,69.2789696362296,73.276436024431,116.517943957423,327.230894435098,10.4474251279935,859.331575945776,400.537870416173,27.5236128884017,63.8316087312858,59.2840830678623,49.3782089834595,21.5144046864568,19.8889194247912,27.0214733443328,24.8845727383159,180.864834314801,639.542167050733,15.9861907953825,7.72837165253853,6.56997240349844,15.1906593909711,0,0,0.472264687882075,0.393364276848904,1.15148819429164,0.154816123316076,101.136334692682,136.145075287769,135.699721731211,0,0,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0.674170453335254,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.393419540227666,0.786021525498329,1.85041349099558,0.501559486172034,1.95553359980154,1.89379122293893,0,0.111410456885174,5.30290633454707,2.65840673500345,4.33286182024025,0.512365278902701,0.130059347559878,1.47994114143309,0.829050053357545,1.73881851441031,0.444859689486181,0.802622484269139,2.09071047609954,0.226618685395132,2.68254345521345,0.34362744548263,0.759059076058509,0.637130828648193,1.95325036156926,1.90090408889675,0.150575119077773,0,1.24930726552346,1.89421801635213,1.64225599384209,0.80642697289893,0.534880391567015,0.868946423296794,12.1903433156981,109.994940991396,14.3206069264754,28.1922538859962,5.0133791063589,10.1392563272577,55.6700162935769,47.6902172896583,89.6190066715363,259.4233950312,186.912423954972,7.46580730336962,834.964800766507,196.886539118532,0,0.522389211897802,0.26591592103773,0,0.571994910780128,0,110.710660903255,162.584338475058,95.4636379420884,41.8327877023767,52.0179300900283,66.0283300656162,163.016073898712,64.8626065515015,109.931775170193,29.1206933105263,112.389379473452,126.965441654992,37.5855568624181,291.556822714274,98.0271756936929,97.2474041013629,81.0551035180473,59.9093076171274,102.722147102142,83.5353780419953,24.1826301988138,0,0,487.117056243211,9.44246708221105,29.6315397295117,19.3317403987299,6.59724227722272,27.6641338114718,12.3349072031308,37.3621485053967,24.9134223901332,6.84664277879486,15.6264379600838,33.509690138259,58.4239670709435,28.8087962239999,34.9138933432357,731.703220090271,571.612765187538,185.615261245337,19.6115612735087,16.5110403255494,19.803563745017,573.877375397505,361.624230165845,129.363878032058,48.7081171485642,10.6324779589779,356.783253879706,579.206222303888,151.165830330751,33.6568818455584,526.144755304463,67.602553615649,41.9888280244657,16.2257103619125,51.1579146051695,7.17558542755448,8.11518077510556,21.8289858194349,8.70264178644767,25.9692373680866,5.41045134095821,43.1791106689288,8.77636927654584,22.7028222025593,3.78650661366172,10.6777882425067,18.912588647801,3.19508633264953,18.6391381721134,40.3554209698961,55.8523865641928,124.917723230602,125.907217375773,0.365921118388786,0.530119073285941,1.39432731443422,0.414644220061482,1.7662459561294,2.91981887260664,95.4342147211877,149.875138598942,390.92182742752,59.4390947880933,62.8035149052539,0,0,0,0,0,0,0,0,0,9.59602091012043,74.3281401158263,65.0286937903612,80.8547912620481,152.106041786197,425.564184821412,100.434284135839,0,0.491953754172454,1012.93635200249,40.4978553157828,68.5650694871479,15.9841066134493,227.119455973873,10.7516740752407,507.488175216434,1769.50225322985,15.4187438616852,286.242396546933,131.229101014816,163.433885939544,62.974124389652,0,0,13.7881523408942,15.9122900294682,13.5254357682743,260.58005848324,81.6393143046457,261.007954023233,45.3166124876412,86.0276458001327,26.8367875415648,0,0.088048434013226,0.414656231081544,0.864719720501769,0.12624243342638,11.7471104440513,7.63976851116555,4.68869788840188,13.6857956818164,8.43185440167253,19.2219557020107,0.857479297891735,609.768836670072,279.014444053299,682.046058134835,164.304350728136,332.620494642251,614.535101108212,32.1785121067693,49.9235697174557,935.977634939935,321.997529692842,1175.72107599805,137.544829899138,107.981699472897,684.9359602016,436.160750769311,106.972976571506,1393.0433444899,156.748476070985,248.387035701084,75.6795543248172,0,0,0,11.7416179190875,2.29723871668228,74.1711906211736,1995.52074979924,769.508827951186,794.672554858657,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,25.2744472941428,99.5339336908757,23.0575270144775,31.1956292296211,35.328939781838,28.3864347061082,52.0107882567647,41.2296156626975,45.481500811197,41.389228517002,29.8901519340946,45.1704462927173,52.1301686808497,69.3136097418102,19.2160317334079,0,0,0.106727557803444,4.54691357169389,91.5394917307734,7.86214762657169,26.0513198209716,5.21770709179412,9.82310330515758,35.4945443438292,42.9834089216031,83.0006233101015,56.3988652490966,101.932607603555,74.2208011808871,95.103246663991,202.509227381612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| ||
|short_description=p1@MT1L,p1@MT1M | |short_description=p1@MT1L,p1@MT1M | ||
}} | }} |
Latest revision as of 01:56, 17 September 2015
Short description: | p1@MT1L, p1@MT1M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MT1L_5end, CAGE_peak_1_at_MT1M_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NR_001447, uc002ejj.3, uc010vhe.1_5end |
EntrezGene: | 4500,4499 |
HGNC: | 14296&submit=Submit 7404, 14296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.33e-20 | 121 |
muscle precursor cell | 2.74e-18 | 58 |
myoblast | 2.74e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-18 | 58 |
muscle cell | 1.96e-16 | 55 |
embryonic cell | 9.74e-15 | 250 |
smooth muscle cell | 1.07e-14 | 43 |
smooth muscle myoblast | 1.07e-14 | 43 |
electrically responsive cell | 2.24e-13 | 61 |
electrically active cell | 2.24e-13 | 61 |
kidney cell | 2.39e-11 | 17 |
kidney epithelial cell | 2.39e-11 | 17 |
epithelial cell of nephron | 1.32e-10 | 15 |
vascular associated smooth muscle cell | 2.29e-10 | 32 |
kidney cortical cell | 1.26e-08 | 12 |
renal cortical epithelial cell | 1.26e-08 | 12 |
endothelial cell | 2.51e-08 | 36 |
kidney tubule cell | 3.49e-08 | 10 |
nephron tubule epithelial cell | 3.49e-08 | 10 |
meso-epithelial cell | 7.62e-08 | 45 |
endothelial cell of vascular tree | 1.39e-07 | 24 |