FFCP PHASE1:Hg19::chr8:145641864..145641871,-: Difference between revisions
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|id=chr8:145641864..145641871,-
|short_description=p14@SLC39A4
|description=CAGE_peak_14_at_SLC39A4_5end
|association_with_transcript=24bp_to_ENST00000276833_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55630 | |EntrezGene=55630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17129 | |HGNC=17129 | ||
|TSSclassifier=strong | |||
|UniProt=A6NDY5 | |UniProt=A6NDY5 | ||
|association_with_transcript=24bp_to_ENST00000276833_5end | |||
|cluster_id=chr8:145641864..145641871,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_14_at_SLC39A4_5end | |||
|id=chr8:145641864..145641871,- | |||
|ontology_enrichment_celltype=CL:0000181!4.96e-09!12;CL:0000417!4.96e-09!12;CL:0000668!4.96e-09!12;CL:0000414!4.96e-09!12;CL:0000412!4.96e-09!12;CL:0000182!4.96e-09!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.25e-10!27;UBERON:0005409!9.41e-08!35;UBERON:0005631!1.43e-07!14;UBERON:0000158!1.43e-07!14;UBERON:0002108!2.43e-07!14;UBERON:0000305!4.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.33e-32;4!UBERON:0000160;1.37e-20;17!UBERON:0005409;2.57e-16;22!UBERON:0004921;8.69e-11;33!UBERON:0001871;5.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.23e-32,4;UBERON:0000160,1.20e-20,17;UBERON:0005409,1.41e-14,25;UBERON:0001871,6.04e-07,6 | |||
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|short_description=p14@SLC39A4 | |||
}} | }} |
Latest revision as of 01:54, 17 September 2015
Short description: | p14@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SLC39A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 24bp_to_ENST00000276833_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | A6NDY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.23e-32 | 4 |
intestine | 1.20e-20 | 17 |
gastrointestinal system | 1.41e-14 | 25 |
temporal lobe | 6.04e-07 | 6 |