FFCP PHASE1:Hg19::chr17:68071356..68071379,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr17:68071356..68071379,+ to FFCP PHASE1:Hg19::chr17:68071356..68071379,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3773 | |EntrezGene=3773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6262 | |HGNC=6262 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPI9 | |UniProt=Q9NPI9 | ||
|association_with_transcript=-46bp_to_ENST00000283936,ENST00000392671,NM_018658,NM_170741,uc002jin.2,uc002jio.2_5end | |||
|cluster_id=chr17:68071356..68071379,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_3_at_KCNJ16_5end | |||
|id=chr17:68071356..68071379,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.93e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.19e-17;3!CL:0000159;2.00e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.19e-17,3;CL:0000159,1.90e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.80e-12;2!UBERON:0003918;4.29e-09;10!UBERON:0007687;4.29e-09;10!UBERON:0005754;6.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.20e-12!115;UBERON:0004175!1.76e-09!25;UBERON:0000476!2.93e-09!3;UBERON:0000920!2.93e-09!3;UBERON:0002113!3.21e-09!27;UBERON:0003918!3.21e-09!27;UBERON:0005095!3.21e-09!27;UBERON:0007687!3.21e-09!27;UBERON:0006947!4.46e-09!3;UBERON:0004054!4.46e-09!3;UBERON:0000489!7.80e-09!32;UBERON:0005631!2.68e-08!14;UBERON:0000158!2.68e-08!14;UBERON:0000062!3.32e-08!511;UBERON:0003887!4.97e-08!21;UBERON:0002553!6.22e-08!70;UBERON:0006554!6.28e-08!44;UBERON:0003133!8.58e-08!48;UBERON:0001008!1.11e-07!45;UBERON:0005156!1.21e-07!59;UBERON:0000990!1.21e-07!59;UBERON:0000080!1.23e-07!18;UBERON:0002120!1.23e-07!18;UBERON:0004875!1.23e-07!18;UBERON:0005721!1.23e-07!18;UBERON:0005754!1.23e-07!18;UBERON:0007297!1.23e-07!18;UBERON:0000988!4.73e-07!3;UBERON:0003064!5.62e-07!37;UBERON:0005904!7.18e-07!4;UBERON:0005172!8.88e-07!55;UBERON:0005173!8.88e-07!55;UBERON:0004876!9.90e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.19e-17;3!UBERON:0000920;1.19e-17;3!UBERON:0006947;2.79e-17;3!UBERON:0004054;2.79e-17;3!UBERON:0005904;4.33e-13;4!UBERON:0000341;3.46e-12;2!UBERON:0005631;3.66e-09;10!UBERON:0000158;3.66e-09;10!UBERON:0001000;6.07e-07;1!UBERON:0005352;6.07e-07;1!UBERON:0000998;6.42e-07;1!UBERON:0006868;6.42e-07;1!UBERON:0001301;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.19e-17,3;UBERON:0006947,2.87e-17,3;UBERON:0004054,2.87e-17,3;UBERON:0005904,4.43e-13,4;UBERON:0003124,6.91e-13,7;UBERON:0000341,3.37e-12,2;UBERON:0005631,1.10e-09,14;UBERON:0000158,1.10e-09,14;UBERON:0002113,4.84e-07,26;UBERON:0003918,4.84e-07,26;UBERON:0011143,4.84e-07,26;UBERON:0005095,4.84e-07,26;UBERON:0007687,4.84e-07,26;UBERON:0001000,6.08e-07,1;UBERON:0005352,6.08e-07,1;UBERON:0000998,6.43e-07,1;UBERON:0006868,6.43e-07,1;UBERON:0001301,8.97e-07,1 | |||
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| ||
|short_description=p3@KCNJ16 | |||
}} | }} |
Latest revision as of 01:52, 17 September 2015
Short description: | p3@KCNJ16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNJ16_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -46bp_to_ENST00000283936, ENST00000392671, NM_018658, NM_170741, uc002jin.2, uc002jio.2_5end |
EntrezGene: | KCNJ16 |
HGNC: | 6262 |
UniProt: | Q9NPI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.19e-17 | 3 |
seromucus secreting cell | 1.90e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.19e-17 | 3 |
male genital duct | 2.87e-17 | 3 |
internal male genitalia | 2.87e-17 | 3 |
duct of male reproductive system | 4.43e-13 | 4 |
chorion | 6.91e-13 | 7 |
throat | 3.37e-12 | 2 |
extraembryonic membrane | 1.10e-09 | 14 |
membranous layer | 1.10e-09 | 14 |
kidney | 4.84e-07 | 26 |
kidney mesenchyme | 4.84e-07 | 26 |
upper urinary tract | 4.84e-07 | 26 |
kidney rudiment | 4.84e-07 | 26 |
kidney field | 4.84e-07 | 26 |
vas deferens | 6.08e-07 | 1 |
spermatic cord | 6.08e-07 | 1 |
seminal vesicle | 6.43e-07 | 1 |
seminal fluid secreting gland | 6.43e-07 | 1 |
epididymis | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.48e-07 | 1 |