FFCP PHASE1:Hg19::chr2:135596180..135596193,+: Difference between revisions
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|id=chr2:135596180..135596193,+
|short_description=p1@ACMSD
|description=CAGE_peak_1_at_ACMSD_5end
|association_with_transcript=0bp_to_ENST00000283054,ENST000003929...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130013 | |EntrezGene=130013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19288 | |HGNC=19288 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDX5 | |UniProt=Q8TDX5 | ||
|association_with_transcript=0bp_to_ENST00000283054,ENST00000392928,ENST00000485893,NM_138326,uc002ttz.2,uc002tua.2_5end | |||
|cluster_id=chr2:135596180..135596193,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ACMSD_5end | |||
|id=chr2:135596180..135596193,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.05e-10!12;CL:0000417!2.05e-10!12;CL:0000668!2.05e-10!12;CL:0000414!2.05e-10!12;CL:0000412!2.05e-10!12;CL:0000182!2.05e-10!12;CL:0000313!8.36e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.26e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.26e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.57e-17;1!UBERON:0004161;4.42e-14;11!UBERON:0003104;2.55e-13;31!UBERON:0009497;5.15e-12;13!UBERON:0003918;1.47e-07;10!UBERON:0007687;1.47e-07;10 | |||
|ontology_enrichment_disease=DOID:2152!8.36e-09!1;DOID:178!1.42e-08!1;DOID:326!1.42e-08!1;DOID:3978!1.42e-08!1;DOID:3394!1.42e-08!1;DOID:5844!1.42e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.02e-14!55;UBERON:0005173!1.02e-14!55;UBERON:0009497!3.57e-14!25;UBERON:0000015!3.57e-14!25;UBERON:0002423!3.57e-14!25;UBERON:0006235!3.57e-14!25;UBERON:0004161!3.57e-14!25;UBERON:0002107!4.80e-14!19;UBERON:0006925!4.80e-14!19;UBERON:0008836!4.80e-14!19;UBERON:0002417!4.42e-13!61;UBERON:0000916!4.42e-13!61;UBERON:0008835!4.64e-12!22;UBERON:0003894!4.64e-12!22;UBERON:0009854!1.63e-11!23;UBERON:0007499!1.50e-10!25;UBERON:0005057!4.00e-10!26;UBERON:0009856!4.00e-10!26;UBERON:0002368!8.49e-10!35;UBERON:0004911!8.36e-09!1;UBERON:0001301!1.65e-08!1;UBERON:0006834!2.06e-08!1;UBERON:0002365!2.10e-08!31;UBERON:0002330!2.10e-08!31;UBERON:0005177!5.58e-08!107;UBERON:0003929!7.42e-08!54;UBERON:0009569!1.92e-07!113;UBERON:0000949!1.95e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.15e-23;25!UBERON:0002107;5.82e-22;19!UBERON:0006925;5.82e-22;19!UBERON:0002365;1.74e-13;31!UBERON:0002330;1.74e-13;31!UBERON:0005172;3.56e-13;52!UBERON:0005173;3.56e-13;52!UBERON:0002368;1.10e-11;33!UBERON:0002417;1.43e-09;58!UBERON:0000916;1.43e-09;58!UBERON:0000949;1.43e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.15e-23,25;UBERON:0000015,1.15e-23,25;UBERON:0002423,1.15e-23,25;UBERON:0006235,1.15e-23,25;UBERON:0004161,1.15e-23,25;UBERON:0002107,5.69e-22,19;UBERON:0006925,5.69e-22,19;UBERON:0008836,5.69e-22,19;UBERON:0005172,4.52e-19,54;UBERON:0005173,4.52e-19,54;UBERON:0008835,5.37e-19,22;UBERON:0003894,5.37e-19,22;UBERON:0009854,3.55e-18,23;UBERON:0002417,4.08e-17,60;UBERON:0000916,4.08e-17,60;UBERON:0007499,9.86e-17,25;UBERON:0009856,4.29e-16,26;UBERON:0002365,1.64e-13,31;UBERON:0002330,1.64e-13,31;UBERON:0002368,5.63e-12,35;UBERON:0003929,6.95e-11,54;UBERON:0005177,6.09e-10,101;UBERON:0000949,2.55e-09,45;UBERON:0009569,6.64e-09,112;UBERON:0002530,4.19e-07,59;UBERON:0005911,4.38e-07,82 | |||
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|short_description=p1@ACMSD | |||
}} | }} |
Latest revision as of 01:47, 17 September 2015
Short description: | p1@ACMSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACMSD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000283054, ENST00000392928, ENST00000485893, NM_138326, uc002ttz.2, uc002tua.2_5end |
EntrezGene: | ACMSD |
HGNC: | 19288 |
UniProt: | Q8TDX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.26e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.15e-23 | 25 |
anatomical boundary | 1.15e-23 | 25 |
hepatobiliary system | 1.15e-23 | 25 |
foregut-midgut junction | 1.15e-23 | 25 |
septum transversum | 1.15e-23 | 25 |
liver | 5.69e-22 | 19 |
digestive gland | 5.69e-22 | 19 |
liver bud | 5.69e-22 | 19 |
abdomen element | 4.52e-19 | 54 |
abdominal segment element | 4.52e-19 | 54 |
hepatic diverticulum | 5.37e-19 | 22 |
liver primordium | 5.37e-19 | 22 |
digestive tract diverticulum | 3.55e-18 | 23 |
abdominal segment of trunk | 4.08e-17 | 60 |
abdomen | 4.08e-17 | 60 |
epithelial sac | 9.86e-17 | 25 |
sac | 4.29e-16 | 26 |
exocrine gland | 1.64e-13 | 31 |
exocrine system | 1.64e-13 | 31 |
endocrine gland | 5.63e-12 | 35 |
gut epithelium | 6.95e-11 | 54 |
trunk region element | 6.09e-10 | 101 |
endocrine system | 2.55e-09 | 45 |
subdivision of trunk | 6.64e-09 | 112 |
gland | 4.19e-07 | 59 |
endo-epithelium | 4.38e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.71e-09 | 2 |