FFCP PHASE1:Hg19::chr13:30423984..30424015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=B2R4J1 | |UniProt=B2R4J1 | ||
|association_with_transcript=-121bp_to_AK311846_5end | |association_with_transcript=-121bp_to_AK311846_5end | ||
|cluster_id=chr13:30423984..30424015,- | |||
|description=CAGE_peak_4_at_UBL3_5end | |description=CAGE_peak_4_at_UBL3_5end | ||
|id=chr13:30423984..30424015,- | |id=chr13:30423984..30424015,- | ||
|ontology_enrichment_celltype=CL:0002057!1.13e-12!42;CL:0000860!1.46e-12!45;CL:0000766!7.90e-12!76;CL:0002009!4.01e-11!65;CL:0000557!1.14e-10!71;CL:0002194!3.51e-10!63;CL:0000576!3.51e-10!63;CL:0000040!3.51e-10!63;CL:0000559!3.51e-10!63;CL:0000839!3.44e-09!70;CL:0002620!8.63e-09!23 | |ontology_enrichment_celltype=CL:0002057!1.13e-12!42;CL:0000860!1.46e-12!45;CL:0000766!7.90e-12!76;CL:0002009!4.01e-11!65;CL:0000557!1.14e-10!71;CL:0002194!3.51e-10!63;CL:0000576!3.51e-10!63;CL:0000040!3.51e-10!63;CL:0000559!3.51e-10!63;CL:0000839!3.44e-09!70;CL:0002620!8.63e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-15;33!CL:0002057;3.33e-15;33!CL:0000473;3.28e-11;39!CL:0000234;3.28e-11;39!CL:0002620;2.86e-09;23!CL:0000576;1.06e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-14,42;CL:0002057,1.66e-14,42;CL:0000766,1.46e-13,72;CL:0002009,4.72e-13,61;CL:0000473,5.51e-13,48;CL:0000234,5.51e-13,48;CL:0000557,1.80e-12,67;CL:0002194,6.03e-12,59;CL:0000576,6.03e-12,59;CL:0000040,6.03e-12,59;CL:0000559,6.03e-12,59;CL:0000839,6.16e-11,66;CL:0002620,2.54e-09,23 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-09!80;UBERON:0005631!9.45e-08!14;UBERON:0000158!9.45e-08!14;UBERON:0000062!1.11e-07!511;UBERON:0002097!1.18e-07!40;UBERON:0001474!1.46e-07!86;UBERON:0002199!1.61e-07!45;UBERON:0002416!1.61e-07!45;UBERON:0004765!7.32e-07!101;UBERON:0001434!7.32e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!1.49e-09!80;UBERON:0005631!9.45e-08!14;UBERON:0000158!9.45e-08!14;UBERON:0000062!1.11e-07!511;UBERON:0002097!1.18e-07!40;UBERON:0001474!1.46e-07!86;UBERON:0002199!1.61e-07!45;UBERON:0002416!1.61e-07!45;UBERON:0004765!7.32e-07!101;UBERON:0001434!7.32e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-11,76;UBERON:0001474,2.69e-09,82;UBERON:0005631,5.90e-09,14;UBERON:0000158,5.90e-09,14;UBERON:0002405,3.55e-08,93;UBERON:0002199,5.79e-08,46;UBERON:0002416,5.79e-08,46;UBERON:0002097,8.28e-08,41;UBERON:0004765,1.03e-07,90;UBERON:0001434,1.72e-07,100 | |||
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| ||
|short_description=p4@UBL3 | |short_description=p4@UBL3 | ||
}} | }} |
Latest revision as of 01:32, 17 September 2015
Short description: | p4@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_AK311846_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | B2R4J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-14 | 42 |
myeloid leukocyte | 1.46e-13 | 72 |
macrophage dendritic cell progenitor | 4.72e-13 | 61 |
defensive cell | 5.51e-13 | 48 |
phagocyte | 5.51e-13 | 48 |
granulocyte monocyte progenitor cell | 1.80e-12 | 67 |
monopoietic cell | 6.03e-12 | 59 |
monocyte | 6.03e-12 | 59 |
monoblast | 6.03e-12 | 59 |
promonocyte | 6.03e-12 | 59 |
myeloid lineage restricted progenitor cell | 6.16e-11 | 66 |
skin fibroblast | 2.54e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-11 | 76 |
bone element | 2.69e-09 | 82 |
extraembryonic membrane | 5.90e-09 | 14 |
membranous layer | 5.90e-09 | 14 |
immune system | 3.55e-08 | 93 |
integument | 5.79e-08 | 46 |
integumental system | 5.79e-08 | 46 |
skin of body | 8.28e-08 | 41 |
skeletal element | 1.03e-07 | 90 |
skeletal system | 1.72e-07 | 100 |