FFCP PHASE1:Hg19::chr1:2491322..2491336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=303bp_to_ENST00000471768_5end | |association_with_transcript=303bp_to_ENST00000471768_5end | ||
|cluster_id=chr1:2491322..2491336,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_16_at_TNFRSF14_5end | |description=CAGE_peak_16_at_TNFRSF14_5end | ||
|id=chr1:2491322..2491336,+ | |id=chr1:2491322..2491336,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.30e-23!10;CL:0000541!1.30e-23!10;CL:0000147!1.42e-16!14;CL:0002567!1.14e-15!3;CL:0000710!1.82e-14!20;CL:0000075!2.30e-10!27;CL:0002077!3.07e-08!33;CL:0002619!3.54e-07!3 | |ontology_enrichment_celltype=CL:0000148!1.30e-23!10;CL:0000541!1.30e-23!10;CL:0000147!1.42e-16!14;CL:0002567!1.14e-15!3;CL:0000710!1.82e-14!20;CL:0000075!2.30e-10!27;CL:0002077!3.07e-08!33;CL:0002619!3.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.13e-88;10!CL:0000147;7.81e-63;14!CL:0002567;7.23e-55;3!CL:0000710;5.55e-44;20!CL:0000075;1.47e-32;27!CL:0002077;8.94e-23;34!CL:0002566;2.97e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.13e-88,10;CL:0000541,6.13e-88,10;CL:0000147,7.81e-63,14;CL:0002567,7.24e-55,3;CL:0000710,5.55e-44,20;CL:0000075,1.47e-32,27;CL:0002077,7.91e-26,34;CL:0000333,2.20e-20,41;CL:0002566,2.71e-19,1;CL:0000133,2.70e-14,59;CL:0000221,9.95e-12,72 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.69e-19;1!CL:0000133;5.72e-08;59!CL:0000221;9.97e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!8.97e-11!2 | |ontology_enrichment_disease=DOID:1909!8.97e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.27e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,3.16e-07,3;UBERON:0006242,3.16e-07,3 | |||
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|short_description=p16@TNFRSF14 | |short_description=p16@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:19, 17 September 2015
Short description: | p16@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TNFRSF14_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 303bp_to_ENST00000471768_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.13e-88 | 10 |
melanoblast | 6.13e-88 | 10 |
pigment cell | 7.81e-63 | 14 |
light melanocyte | 7.24e-55 | 3 |
neurecto-epithelial cell | 5.55e-44 | 20 |
columnar/cuboidal epithelial cell | 1.47e-32 | 27 |
ecto-epithelial cell | 7.91e-26 | 34 |
migratory neural crest cell | 2.20e-20 | 41 |
dark melanocyte | 2.71e-19 | 1 |
neurectodermal cell | 2.70e-14 | 59 |
ectodermal cell | 9.95e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 3.16e-07 | 3 |
gall bladder primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.27e-10 | 2 |