FFCP PHASE1:Hg19::chr20:51589792..51589811,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128553 | |EntrezGene=128553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13010 | |HGNC=13010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_BC160051_5end | |association_with_transcript=-21bp_to_BC160051_5end | ||
|cluster_id=chr20:51589792..51589811,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_7_at_TSHZ2_5end | |description=CAGE_peak_7_at_TSHZ2_5end | ||
|id=chr20:51589792..51589811,+ | |id=chr20:51589792..51589811,+ | ||
|ontology_enrichment_celltype=CL:0000080!8.50e-07!6 | |ontology_enrichment_celltype=CL:0000080!8.50e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;8.32e-23;6!CL:0000226;2.44e-16;3!CL:0000842;2.44e-16;3!CL:0000898;6.24e-08;3!CL:0000791;1.98e-07;18!CL:0000789;1.98e-07;18!CL:0002419;1.98e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.89e-23,6;CL:0000226,1.11e-16,3;CL:0000842,1.11e-16,3;CL:0000898,5.44e-08,3;CL:0000791,1.87e-07,18;CL:0000789,1.87e-07,18;CL:0002420,1.87e-07,18;CL:0002419,1.87e-07,18;CL:0000790,1.87e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.98e-07;18!UBERON:0005754;5.89e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;4.08e-07;1!DOID:4549;4.08e-07;1!DOID:5861;4.08e-07;1!DOID:6496;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.09e-07,1;DOID:4549,4.09e-07,1;DOID:5861,4.09e-07,1;DOID:6496,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-27!115;UBERON:0000178!5.51e-07!15;UBERON:0000179!5.51e-07!15;UBERON:0000463!5.51e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;7.38e-12;2!UBERON:0003127;1.79e-11;2!UBERON:0000341;1.79e-11;2!UBERON:0003978;3.47e-08;3!UBERON:0000946;3.47e-08;3!UBERON:0000998;5.89e-07;1!UBERON:0002134;5.89e-07;1!UBERON:0006868;5.89e-07;1!UBERON:0005208;5.89e-07;1!UBERON:0004145;5.89e-07;1!UBERON:0005946;5.89e-07;1!UBERON:0005965;5.89e-07;1!UBERON:0002078;5.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.19e-12,2;UBERON:0002133,1.18e-11,2;UBERON:0003127,3.23e-11,2;UBERON:0003978,4.72e-08,3;UBERON:0009751,4.72e-08,3;UBERON:0000946,4.72e-08,3;UBERON:0002523,4.72e-08,3;UBERON:0005983,4.72e-08,3;UBERON:0002165,4.72e-08,3;UBERON:0002062,4.72e-08,3;UBERON:0007280,4.72e-08,3;UBERON:0002134,6.08e-07,1;UBERON:0005208,6.08e-07,1;UBERON:0005946,6.08e-07,1;UBERON:0005965,6.08e-07,1;UBERON:0002078,6.08e-07,1;UBERON:0000998,6.43e-07,1;UBERON:0006868,6.43e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52432471261816,3.14408610199332,2.87842098599313,0,0,0,0,0.557052284425868,1.17842362989935,1.32920336750173,1.08321545506006,0,0,0,0,0,3.85545064221357,1.87278579662799,1.04535523804977,0.226618685395132,1.53288197440768,0.68725489096526,1.01207876807801,0.637130828648193,0.651083453856419,0,0.752875595388864,0.511946444617674,0,0.473554504088034,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.72038491523742,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.474541238222193,0,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,3.9313088667105,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,1.17400313583789,0,0,0,0,0.61384789315225,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0,0,0.614014698904518,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.796991953004279,1.10513566212459,0.755798243562828,0,0.369254416383208,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,1.23120413606075,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0.889563386041866,0.370691816839509,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0.586993856796269,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.146178634172371,0,0.484945082442097,9.97294231613953,0.677942222341597,0,0,0.253243183823515,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,1.44475294950759,0,0.410716136675979,0,0,0,1.11712960508902,0.687481272035051,2.15361907373044,0,0,0,0.134366944973453,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0.775697738169303,0.26446520348538,0,0,0,0.471612915298998,0.414239055347196,0,0.592834895693833,0.121792598380896,1.27668251554036,0,0.7520696820681,0.612691153526923,0.327872630709804,0.157054096250234,0,0.366078794705889,0.625954653532499,0,0.110929051536852,0.372578417648301,0.415045904808692,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0,0.251567901752575,0,0,0.756154618816195,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.39997479170986,0,0.861074898304078,0,0,0,0,0,0.646948868380091,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0.20170506870352,0,0,0,0,0.202612753855184,0,0.620060389503552,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,1.13831095675649,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0.860454717640555,0,0,2.11693525095465,0.9164274741762,0,0,0,0.196300467230486,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0.994753875806841,0,0,0,1.05673990496671,0.154348316215889,0.218559560503957,0.940634592723046,0.490296643507811,0.235676547101626,0.196308467114945,0.594092800654172,0.4226557275834,0,0.845855261818682,0.966868319603658,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0.865253124247578,0,0,0.380095503034311,0,0,0,0,0.606229585745915,0.267964130156178,0.829169439458779,0.1034329958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| ||
|short_description=p7@TSHZ2 | |short_description=p7@TSHZ2 | ||
}} | }} |
Latest revision as of 00:56, 17 September 2015
Short description: | p7@TSHZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TSHZ2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -21bp_to_BC160051_5end |
EntrezGene: | TSHZ2 |
HGNC: | 13010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.89e-23 | 6 |
single nucleate cell | 1.11e-16 | 3 |
mononuclear cell | 1.11e-16 | 3 |
naive T cell | 5.44e-08 | 3 |
mature alpha-beta T cell | 1.87e-07 | 18 |
alpha-beta T cell | 1.87e-07 | 18 |
immature T cell | 1.87e-07 | 18 |
mature T cell | 1.87e-07 | 18 |
immature alpha-beta T cell | 1.87e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
throat | 4.19e-12 | 2 |
atrioventricular valve | 1.18e-11 | 2 |
open tracheal system trachea | 3.23e-11 | 2 |
valve | 4.72e-08 | 3 |
cardiac mesenchyme | 4.72e-08 | 3 |
cardial valve | 4.72e-08 | 3 |
tunica intima | 4.72e-08 | 3 |
heart layer | 4.72e-08 | 3 |
endocardium | 4.72e-08 | 3 |
endocardial cushion | 4.72e-08 | 3 |
presumptive endocardium | 4.72e-08 | 3 |
tricuspid valve | 6.08e-07 | 1 |
right atrium valve | 6.08e-07 | 1 |
outflow tract of atrium | 6.08e-07 | 1 |
outflow part of right atrium | 6.08e-07 | 1 |
right cardiac atrium | 6.08e-07 | 1 |
seminal vesicle | 6.43e-07 | 1 |
seminal fluid secreting gland | 6.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.09e-07 | 1 |
extraosseous chondrosarcoma | 4.09e-07 | 1 |
myxoid chondrosarcoma | 4.09e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 4.09e-07 | 1 |