FFCP PHASE1:Hg19::chr7:148036546..148036559,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:148036546..148036559,+ to FFCP PHASE1:Hg19::chr7:148036546..148036559,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26047 | |EntrezGene=26047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13830 | |HGNC=13830 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHC6 | |UniProt=Q9UHC6 | ||
|association_with_transcript=0bp_to_uc003wev.1_5end | |||
|cluster_id=chr7:148036546..148036559,+ | |||
|coexpression_cluster_id=C4664 | |||
|description=CAGE_peak_4_at_CNTNAP2_5end | |||
|id=chr7:148036546..148036559,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.85e-08!8;CL:0000039!7.95e-07!7;CL:0000586!7.95e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.81e-09;7!CL:0000586;2.81e-09;7!CL:0002322;1.06e-08;5!CL:0000540;1.61e-08;6!CL:0000404;1.61e-08;6!CL:0002319;4.66e-08;25!CL:0000236;7.62e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.02e-11,8;CL:0000039,2.63e-09,7;CL:0000586,2.63e-09,7;CL:0002322,1.08e-08,5;CL:0000221,1.21e-08,72;CL:0000540,1.43e-08,6;CL:0000031,1.43e-08,6;CL:0000404,1.43e-08,6;CL:0002319,4.29e-08,25;CL:0000133,3.94e-07,59;CL:0000236,4.53e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000031;1.61e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!2.93e-08!22;DOID:2994!2.93e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.97e-11;22!DOID:2994;1.97e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.78e-11,22;DOID:2994,1.78e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.67e-28!82;UBERON:0005743!7.53e-28!86;UBERON:0000073!1.25e-26!94;UBERON:0001016!1.25e-26!94;UBERON:0001049!3.72e-21!57;UBERON:0005068!3.72e-21!57;UBERON:0006241!3.72e-21!57;UBERON:0007135!3.72e-21!57;UBERON:0000955!7.95e-21!69;UBERON:0006238!7.95e-21!69;UBERON:0000153!2.53e-20!129;UBERON:0007811!2.53e-20!129;UBERON:0002346!6.41e-20!90;UBERON:0002616!2.76e-19!59;UBERON:0003075!5.46e-19!86;UBERON:0007284!5.46e-19!86;UBERON:0000924!5.47e-19!173;UBERON:0006601!5.47e-19!173;UBERON:0000033!1.23e-18!123;UBERON:0004121!4.48e-18!169;UBERON:0003056!8.73e-18!61;UBERON:0002780!1.52e-17!41;UBERON:0001890!1.52e-17!41;UBERON:0006240!1.52e-17!41;UBERON:0007023!3.82e-17!115;UBERON:0003080!7.98e-17!42;UBERON:0001869!1.96e-15!32;UBERON:0002020!3.67e-15!34;UBERON:0003528!3.67e-15!34;UBERON:0001893!5.01e-15!34;UBERON:0002791!1.46e-14!33;UBERON:0000956!3.31e-11!25;UBERON:0000203!3.31e-11!25;UBERON:0002619!2.76e-09!22;UBERON:0001950!2.88e-08!20;UBERON:0000064!1.05e-07!219;UBERON:0000475!1.38e-07!365;UBERON:0000481!9.18e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.31e-11;32!UBERON:0002791;8.85e-11;32!UBERON:0003528;1.81e-10;34!UBERON:0002020;1.81e-10;34!UBERON:0000955;2.30e-10;68!UBERON:0001893;3.34e-10;34!UBERON:0001017;6.27e-10;75!UBERON:0002780;2.27e-09;41!UBERON:0001890;2.27e-09;41!UBERON:0001016;5.94e-09;83!UBERON:0000073;9.60e-09;53!UBERON:0002616;9.60e-09;53!UBERON:0000956;4.67e-08;25!UBERON:0000203;4.67e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-24,89;UBERON:0001017,3.09e-24,81;UBERON:0011216,3.44e-19,223;UBERON:0000955,7.72e-17,68;UBERON:0006238,7.72e-17,68;UBERON:0000073,4.01e-14,53;UBERON:0002616,4.01e-14,53;UBERON:0001049,5.71e-14,56;UBERON:0005068,5.71e-14,56;UBERON:0006241,5.71e-14,56;UBERON:0007135,5.71e-14,56;UBERON:0004121,7.99e-14,171;UBERON:0000924,7.99e-14,171;UBERON:0006601,7.99e-14,171;UBERON:0002346,2.18e-13,86;UBERON:0003056,3.67e-13,61;UBERON:0002780,7.89e-13,41;UBERON:0001890,7.89e-13,41;UBERON:0003080,7.89e-13,41;UBERON:0006240,7.89e-13,41;UBERON:0003075,8.83e-13,82;UBERON:0007284,8.83e-13,82;UBERON:0001869,2.57e-12,32;UBERON:0003528,2.37e-11,34;UBERON:0002020,2.37e-11,34;UBERON:0001893,2.92e-11,34;UBERON:0002791,3.61e-11,32;UBERON:0010371,1.12e-10,104;UBERON:0000956,4.55e-08,25;UBERON:0000203,4.55e-08,25;UBERON:0007023,3.07e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,1.23121058076788,0,0.313454721478088,4.57977579409691,6.15934912827979,1.50651167513763,0,0,0,0,0,0,0.919421224478927,3.614471025339,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,8.7382177801941,8.89509253863555,0.426730222566507,3.2031678962881,14.3688109988621,3.30522436392431,5.72432252721218,15.9379631350646,16.4426413023863,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4889411753526,4.87804674417641,5.18225235589444,1.5062593682237,0.728590576585084,1.48313777113772,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,3.22263453687318,0.760272105718513,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,4.8434376846378,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,5.72766853240753,0.860413786167011,17.4422399765321,24.7830666761177,18.0100611447753,25.189636368735,17.662459561294,25.5484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,4.13552934676983,0,8.24022538238861,0.343135620597051,0.329250856225877,0,2.01057944823262,3.88871469665824,0,0,0,38.6048248567006,0.117408694235822,0.433099343283221,1.85194205030644,0,0,0,0,0,0,0.93733833986777,3.69560682037491,5.10390350072591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5077334035855,19.5209780786433,2.31986643833309,9.38091085872353,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.82707210449155,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9319611063036,0,0,0,0,0,1.80479845162965,2.0794141018192,2.35304930753057,0,11.7162308071092,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0.256450125116389,0,0,3.81251743096572,0,0.082509499920588,1.72279661398852,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0.576570202095319,1.53135254993501,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,4.3556393944529,2.82431402330337,0,0,0,0.229723400206959,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0.648473311192717,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,2.98244294329889,2.39138007897872,0,0,0,0,1.38141957765574,0.251932747854276,0,0,0,4.13394415277704,0.358042349351218,0,0.295930216910801,2.3948309234694,0,2.90799823828566,1.85536196323703,3.99227596002388,0,6.1221999997337,0,4.43794448313449,0,0,17.5819120353147,10.2061614684139,0.347249989866585,5.31444831488303,4.94445398364173,0,0.221158519862449,0.295547618953547,3.51016635446356,0,0,0.0769502585037971,0,9.68368398429853,2.87224462111271,4.45454224880233,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,26.4330243581469,0,1.99052386215701,0.707660516026713,0,0,0,0,0.808813595768125,0,4.45102446878144,0.182454789215666,0,0,0,0,3.97894590119637,0,0.450970258243478,2.79958116772567,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,1.06687918137261,0,6.77942222341597,0,0,2.40581024632339,3.51992488922645,0.0801588202515337,0,0.19980960958213,1.58499458869517,0,0,0,0,0.707082103850386,0,0.104602846312333,0,0,2.40168115483916,0.684526894459965,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,32.6188658676871,0.86661500537946,0.824158583811665,0.876246070104404,0,0,3.18091875923721,0.953423842781029,36.0087052561643,14.4416408427095,15.3712925070798,0,0,2.30848315300494,0.335434687599266,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,2.06852730178481,0.92562821219883,3.59282359557092,0,0.106787412567695,0,0,0,1.38328142328561,0,0.638341257770182,0,0,0,0,0.314108192500469,0.886068179966986,1.46431517882356,0.876336514945499,5.16068276121064,1.33114861844223,1.36612086471044,1.66018361923477,4.74925550256005,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0.967809053062115,0.389720617678777,1.86010776438708,0,0,0,0,0,0,0.344429959321631,0,0,0.979156554036111,0,3.58104239650225,0,13.0530731740394,0,2.88545300921843,2.33832412111851,0.495743057036009,17.8766373751438,0,0,4.00285374142735,0,0,3.78952428069111,0,0.798169295285756,1.23069818544453,2.7727886584389,1.65977405914123,0.645902582527404,0,0,0.353909170043221,0,0.115525666150338,0,2.7614397042404,0,0.526472298444801,0,0.781514011233092,13.3572414185525,0,0.295712172434091,1.35075169236789,0,0.413373593002368,1.58539525484767,14.7683198434919,0,1.48863353516788,0,2.8107734080711,2.14280734351315,3.69912094440706,0,2.04895972216168,1.86274977341542,0,0,2.9906682509806,0.855046056317038,0.118193840883968,2.55832224351759,2.59027206406696,3.9278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| ||
|short_description=p4@CNTNAP2 | |||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p4@CNTNAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNTNAP2_5end |
Coexpression cluster: | C4664_teratocarcinoma_iPS_HES3GFP_Neural_H9_Lens_hepatoblastoma |
Association with transcript: | 0bp_to_uc003wev.1_5end |
EntrezGene: | CNTNAP2 |
HGNC: | 13830 |
UniProt: | Q9UHC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.02e-11 | 8 |
germ line cell | 2.63e-09 | 7 |
germ cell | 2.63e-09 | 7 |
embryonic stem cell | 1.08e-08 | 5 |
ectodermal cell | 1.21e-08 | 72 |
neuron | 1.43e-08 | 6 |
neuroblast | 1.43e-08 | 6 |
electrically signaling cell | 1.43e-08 | 6 |
neural cell | 4.29e-08 | 25 |
neurectodermal cell | 3.94e-07 | 59 |
B cell | 4.53e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.76e-24 | 89 |
central nervous system | 3.09e-24 | 81 |
organ system subdivision | 3.44e-19 | 223 |
brain | 7.72e-17 | 68 |
future brain | 7.72e-17 | 68 |
regional part of nervous system | 4.01e-14 | 53 |
regional part of brain | 4.01e-14 | 53 |
neural tube | 5.71e-14 | 56 |
neural rod | 5.71e-14 | 56 |
future spinal cord | 5.71e-14 | 56 |
neural keel | 5.71e-14 | 56 |
ectoderm-derived structure | 7.99e-14 | 171 |
ectoderm | 7.99e-14 | 171 |
presumptive ectoderm | 7.99e-14 | 171 |
neurectoderm | 2.18e-13 | 86 |
pre-chordal neural plate | 3.67e-13 | 61 |
regional part of forebrain | 7.89e-13 | 41 |
forebrain | 7.89e-13 | 41 |
anterior neural tube | 7.89e-13 | 41 |
future forebrain | 7.89e-13 | 41 |
neural plate | 8.83e-13 | 82 |
presumptive neural plate | 8.83e-13 | 82 |
cerebral hemisphere | 2.57e-12 | 32 |
brain grey matter | 2.37e-11 | 34 |
gray matter | 2.37e-11 | 34 |
telencephalon | 2.92e-11 | 34 |
regional part of telencephalon | 3.61e-11 | 32 |
ecto-epithelium | 1.12e-10 | 104 |
cerebral cortex | 4.55e-08 | 25 |
pallium | 4.55e-08 | 25 |
adult organism | 3.07e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.78e-11 | 22 |
germ cell cancer | 1.78e-11 | 22 |