FFCP PHASE1:Hg19::chr1:248020445..248020456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25893 | |EntrezGene=25893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |HGNC=24150 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NG06 | |UniProt=Q8NG06 | ||
|association_with_transcript=-44bp_to_ENST00000366481,NM_015431,uc001ido.2_5end | |association_with_transcript=-44bp_to_ENST00000366481,NM_015431,uc001ido.2_5end | ||
|cluster_id=chr1:248020445..248020456,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_TRIM58_5end | |description=CAGE_peak_5_at_TRIM58_5end | ||
|id=chr1:248020445..248020456,+ | |id=chr1:248020445..248020456,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.45e-18;2!CL:0000558;4.45e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.46e-18,2;CL:0000765,4.46e-18,2;CL:0000050,4.46e-18,2;CL:0000038,4.46e-18,2;CL:0000558,4.46e-18,2;CL:0000547,4.46e-18,2;CL:0000549,4.46e-18,2;CL:0000550,4.46e-18,2;CL:0000552,4.46e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.35e-10!31;DOID:1036!1.80e-08!8;DOID:1240!2.86e-07!39 | |ontology_enrichment_disease=DOID:8692!5.35e-10!31;DOID:1036!1.80e-08!8;DOID:1240!2.86e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.71e-20!15;UBERON:0000179!1.71e-20!15;UBERON:0000463!1.71e-20!15;UBERON:0007023!7.07e-09!115 | |ontology_enrichment_uberon=UBERON:0000178!1.71e-20!15;UBERON:0000179!1.71e-20!15;UBERON:0000463!1.71e-20!15;UBERON:0007023!7.07e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.82e-45;15!UBERON:0000179;5.82e-45;15!UBERON:0000463;5.82e-45;15!UBERON:0002390;2.13e-23;32!UBERON:0002193;9.27e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.83e-45,15;UBERON:0000179,5.83e-45,15;UBERON:0000463,5.83e-45,15;UBERON:0007023,2.89e-07,114;UBERON:0002390,4.64e-07,98;UBERON:0003061,4.64e-07,98 | |||
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| ||
|short_description=p5@TRIM58 | |short_description=p5@TRIM58 | ||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p5@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM58_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -44bp_to_ENST00000366481, NM_015431, uc001ido.2_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | Q8NG06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.46e-18 | 2 |
erythroblast | 4.46e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 4.46e-18 | 2 |
erythroid progenitor cell | 4.46e-18 | 2 |
reticulocyte | 4.46e-18 | 2 |
proerythroblast | 4.46e-18 | 2 |
basophilic erythroblast | 4.46e-18 | 2 |
polychromatophilic erythroblast | 4.46e-18 | 2 |
orthochromatic erythroblast | 4.46e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.83e-45 | 15 |
haemolymphatic fluid | 5.83e-45 | 15 |
organism substance | 5.83e-45 | 15 |
adult organism | 2.89e-07 | 114 |
hematopoietic system | 4.64e-07 | 98 |
blood island | 4.64e-07 | 98 |