FFCP PHASE1:Hg19::chr15:25207254..25207268,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:25207254..25207268,+
|short_description=p8@SNRPN
|description=CAGE_peak_8_at_SNRPN_5end
|association_with_transcript=-17bp_to_BC113069_5end
|EntrezGene=6...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6638 | |EntrezGene=6638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11164 | |HGNC=11164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_BC113069_5end | |||
|cluster_id=chr15:25207254..25207268,+ | |||
|description=CAGE_peak_8_at_SNRPN_5end | |||
|id=chr15:25207254..25207268,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.85e-10;6!CL:0000404;1.85e-10;6!CL:0002322;2.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.46e-10,6;CL:0000031,1.46e-10,6;CL:0000404,1.46e-10,6;CL:0000047,8.53e-08,8;CL:0002322,1.95e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.85e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.54e-18!57;UBERON:0005068!5.54e-18!57;UBERON:0006241!5.54e-18!57;UBERON:0007135!5.54e-18!57;UBERON:0007023!1.44e-17!115;UBERON:0002780!1.05e-15!41;UBERON:0001890!1.05e-15!41;UBERON:0006240!1.05e-15!41;UBERON:0002020!3.59e-15!34;UBERON:0003528!3.59e-15!34;UBERON:0003080!6.61e-15!42;UBERON:0002346!3.71e-14!90;UBERON:0001017!3.84e-14!82;UBERON:0005743!5.54e-14!86;UBERON:0001893!6.63e-14!34;UBERON:0001869!9.08e-14!32;UBERON:0002791!9.21e-14!33;UBERON:0002616!2.05e-13!59;UBERON:0003075!4.76e-13!86;UBERON:0007284!4.76e-13!86;UBERON:0000073!1.67e-12!94;UBERON:0001016!1.67e-12!94;UBERON:0002619!4.07e-11!22;UBERON:0000956!8.05e-11!25;UBERON:0000203!8.05e-11!25;UBERON:0003056!5.86e-10!61;UBERON:0001950!6.65e-10!20;UBERON:0000955!8.56e-10!69;UBERON:0006238!8.56e-10!69;UBERON:0000924!7.52e-09!173;UBERON:0006601!7.52e-09!173;UBERON:0004121!4.67e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.25e-19;32!UBERON:0002791;2.39e-18;32!UBERON:0002619;7.50e-18;22!UBERON:0003528;1.13e-17;34!UBERON:0002020;1.13e-17;34!UBERON:0001893;1.33e-15;34!UBERON:0002780;1.94e-15;41!UBERON:0001890;1.94e-15;41!UBERON:0000956;2.34e-15;25!UBERON:0000203;2.34e-15;25!UBERON:0001950;1.83e-14;20!UBERON:0000073;2.39e-12;53!UBERON:0002616;2.39e-12;53!UBERON:0001017;7.27e-09;75!UBERON:0002021;1.59e-08;5!UBERON:0001872;9.99e-08;5!UBERON:0005383;1.09e-07;3!UBERON:0005382;1.09e-07;3!UBERON:0000955;1.61e-07;68!UBERON:0001016;8.97e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-23,56;UBERON:0005068,2.02e-23,56;UBERON:0006241,2.02e-23,56;UBERON:0007135,2.02e-23,56;UBERON:0001017,9.30e-23,81;UBERON:0001016,3.31e-21,89;UBERON:0000073,5.53e-21,53;UBERON:0002616,5.53e-21,53;UBERON:0003528,4.81e-20,34;UBERON:0002020,4.81e-20,34;UBERON:0002780,9.40e-20,41;UBERON:0001890,9.40e-20,41;UBERON:0003080,9.40e-20,41;UBERON:0006240,9.40e-20,41;UBERON:0002791,3.02e-19,32;UBERON:0001869,3.02e-19,32;UBERON:0001893,7.39e-18,34;UBERON:0002619,1.38e-17,22;UBERON:0007023,5.41e-16,114;UBERON:0000956,3.98e-15,25;UBERON:0000203,3.98e-15,25;UBERON:0003075,4.36e-15,82;UBERON:0007284,4.36e-15,82;UBERON:0010371,1.22e-14,104;UBERON:0000955,1.40e-14,68;UBERON:0006238,1.40e-14,68;UBERON:0001950,2.48e-14,20;UBERON:0002346,4.85e-14,86;UBERON:0003056,5.72e-13,61;UBERON:0004121,3.85e-12,171;UBERON:0000924,3.85e-12,171;UBERON:0006601,3.85e-12,171;UBERON:0011216,5.17e-10,223;UBERON:0010314,7.05e-09,132;UBERON:0002021,2.53e-08,5;UBERON:0005383,9.97e-08,3;UBERON:0005382,9.97e-08,3;UBERON:0001872,1.72e-07,5;UBERON:0000025,5.39e-07,192 | |||
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|phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,0.893922188854576,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.821246550437305,0.376627918784408,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0.919421224478927,0,1.47901604066715,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,1.09227722252426,1.77901850772711,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,1.17903228824749,0.205601498999509,0.83593247695339,1.62961133316795,0.946895611469467,0,1.11410456885174,0.883817722424512,0.664601683750863,0.541607727530031,0.640456598628376,0.650296737799391,0.164437904603676,0.276350017785848,0.579606171470105,1.18629250529648,1.07016331235885,0,0.453237370790265,0,0.68725489096526,1.26509846009751,0.637130828648193,1.30216690771284,1.90090408889675,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0,0.398873881556595,0.953962497221368,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0,0.389748020644795,0,0,0.161646056818812,0,0.10075209822764,0,0.773043412653187,0,0,1.21973706129595,0.927708378250397,1.97529702878181,1.14027160516907,1.26160425437814,4.74470566798579,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0.474541238222193,0,0,0,1.4763109092493,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0.445893486866185,0,0.335964256397719,0,0.179117045405697,0,0.383382679165211,0,0.264145302039678,0.207328115540772,0,0.25248486685276,0,0,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0.385029108839245,0.76228387266739,0,1.54657762555539,0.502548796003046,1.27587750330633,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0,1.07857100409308,0.640365346820666,0,0,0,0.496215615637554,0.460385919864187,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,0.40101294060657,0,0,0.364182336013434,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.103041011647722,0.366277859273374,0.165018999841176,0.574265537996172,1.30012049207304,0,0.096670718292122,0.308097234229289,0.614014698904518,0.275673144969061,0,0.290033387828457,0.255679882248303,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,1.71749864090389,0,0,0,0.255897791311334,0.42793898803392,0.636406495851874,1.56989728039846,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0,2.11300293513511,0,0.282810863907425,0,0,0,0.876901770507525,1.73632660280006,0,0,0.92947049429925,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0,0.399158742865633,0,1.2700414963433,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,1.82870241333667,0,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0.511572370226872,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0.347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| ||
|short_description=p8@SNRPN | |||
}} | }} |
Latest revision as of 00:17, 17 September 2015
Short description: | p8@SNRPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SNRPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_BC113069_5end |
EntrezGene: | SNRPN |
HGNC: | 11164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.46e-10 | 6 |
neuroblast | 1.46e-10 | 6 |
electrically signaling cell | 1.46e-10 | 6 |
neuronal stem cell | 8.53e-08 | 8 |
embryonic stem cell | 1.95e-07 | 5 |