FFCP PHASE1:Hg19::chr11:17373513..17373572,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:17373513..17373572,+
|short_description=p1@B7H6
|description=CAGE_peak_1_at_B7H6_5end
|association_with_transcript=67bp_to_ENST00000530403_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374383 | |EntrezGene=374383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_ENST00000530403_5end | |||
|cluster_id=chr11:17373513..17373572,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_B7H6_5end | |||
|id=chr11:17373513..17373572,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.93e-20!45;CL:0002057!4.19e-19!42;CL:0002009!1.12e-18!65;CL:0002194!1.46e-17!63;CL:0000576!1.46e-17!63;CL:0000040!1.46e-17!63;CL:0000559!1.46e-17!63;CL:0000557!1.67e-17!71;CL:0000766!2.62e-17!76;CL:0000763!5.40e-17!112;CL:0000049!5.40e-17!112;CL:0000839!1.01e-14!70;CL:0000988!1.23e-08!182;CL:0000037!1.49e-08!172;CL:0000566!1.49e-08!172;CL:0002032!3.37e-08!165;CL:0000837!3.37e-08!165;CL:0000134!1.12e-07!358;CL:0000048!1.84e-07!430;CL:0002320!2.63e-07!365;CL:0000738!3.76e-07!140;CL:0000723!4.73e-07!436;CL:0002087!7.49e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-21;33!CL:0002057;2.15e-21;33!CL:0000473;4.51e-18;39!CL:0000234;4.51e-18;39!CL:0000576;7.06e-13;48!CL:0000766;5.34e-09;69!CL:0000763;5.32e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.94e-22,48;CL:0000234,3.94e-22,48;CL:0000860,2.93e-21,42;CL:0002057,2.93e-21,42;CL:0002009,5.53e-20,61;CL:0002194,1.04e-18,59;CL:0000576,1.04e-18,59;CL:0000040,1.04e-18,59;CL:0000559,1.04e-18,59;CL:0000763,2.08e-18,108;CL:0000049,2.08e-18,108;CL:0000557,4.20e-18,67;CL:0000766,1.31e-17,72;CL:0000839,3.57e-15,66;CL:0000988,6.31e-11,177;CL:0000037,1.11e-10,168;CL:0002032,2.46e-10,161;CL:0000837,2.46e-10,161;CL:0000738,1.04e-08,136;CL:0002087,1.17e-08,115;CL:0000134,3.10e-08,354;CL:0000048,3.28e-08,427;CL:0000723,7.58e-08,433;CL:0002320,1.04e-07,361;CL:0002031,1.48e-07,120;CL:0000034,2.49e-07,441;CL:0000219,9.95e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.57e-15!80;UBERON:0001474!1.65e-14!86;UBERON:0004765!7.08e-14!101;UBERON:0001434!7.08e-14!101;UBERON:0002390!1.91e-13!102;UBERON:0003061!1.91e-13!102;UBERON:0002193!1.30e-10!112;UBERON:0001950!3.28e-09!20;UBERON:0002204!4.16e-09!167;UBERON:0002405!1.67e-08!115;UBERON:0002619!1.80e-08!22;UBERON:0001869!2.55e-08!32;UBERON:0002780!1.15e-07!41;UBERON:0001890!1.15e-07!41;UBERON:0006240!1.15e-07!41;UBERON:0001893!2.42e-07!34;UBERON:0003080!4.90e-07!42;UBERON:0002384!6.71e-07!375;UBERON:0002791!6.78e-07!33;UBERON:0002020!8.67e-07!34;UBERON:0003528!8.67e-07!34;UBERON:0000956!9.16e-07!25;UBERON:0000203!9.16e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.92e-10;20!UBERON:0002619;1.04e-08;22!UBERON:0001869;8.42e-08;32!UBERON:0001893;6.20e-07;34!UBERON:0002791;6.74e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-15,76;UBERON:0001474,1.33e-14,82;UBERON:0002390,2.12e-13,98;UBERON:0003061,2.12e-13,98;UBERON:0001434,6.31e-13,100;UBERON:0004765,7.19e-13,90;UBERON:0001950,1.02e-10,20;UBERON:0002193,1.20e-10,108;UBERON:0002405,1.19e-09,93;UBERON:0002204,1.75e-09,167;UBERON:0002619,5.95e-09,22;UBERON:0001869,8.99e-09,32;UBERON:0002791,1.14e-07,32;UBERON:0001893,1.22e-07,34;UBERON:0002780,2.97e-07,41;UBERON:0001890,2.97e-07,41;UBERON:0003080,2.97e-07,41;UBERON:0006240,2.97e-07,41;UBERON:0002384,3.41e-07,371;UBERON:0003528,4.39e-07,34;UBERON:0002020,4.39e-07,34;UBERON:0000956,6.76e-07,25;UBERON:0000203,6.76e-07,25 | |||
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| ||
|short_description=p1@B7H6 | |||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p1@B7H6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B7H6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 67bp_to_ENST00000530403_5end |
EntrezGene: | B7H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.94e-22 | 48 |
phagocyte | 3.94e-22 | 48 |
classical monocyte | 2.93e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-21 | 42 |
macrophage dendritic cell progenitor | 5.53e-20 | 61 |
monopoietic cell | 1.04e-18 | 59 |
monocyte | 1.04e-18 | 59 |
monoblast | 1.04e-18 | 59 |
promonocyte | 1.04e-18 | 59 |
myeloid cell | 2.08e-18 | 108 |
common myeloid progenitor | 2.08e-18 | 108 |
granulocyte monocyte progenitor cell | 4.20e-18 | 67 |
myeloid leukocyte | 1.31e-17 | 72 |
myeloid lineage restricted progenitor cell | 3.57e-15 | 66 |
hematopoietic cell | 6.31e-11 | 177 |
hematopoietic stem cell | 1.11e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.46e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.46e-10 | 161 |
leukocyte | 1.04e-08 | 136 |
nongranular leukocyte | 1.17e-08 | 115 |
mesenchymal cell | 3.10e-08 | 354 |
multi fate stem cell | 3.28e-08 | 427 |
somatic stem cell | 7.58e-08 | 433 |
connective tissue cell | 1.04e-07 | 361 |
hematopoietic lineage restricted progenitor cell | 1.48e-07 | 120 |
stem cell | 2.49e-07 | 441 |
motile cell | 9.95e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-15 | 76 |
bone element | 1.33e-14 | 82 |
hematopoietic system | 2.12e-13 | 98 |
blood island | 2.12e-13 | 98 |
skeletal system | 6.31e-13 | 100 |
skeletal element | 7.19e-13 | 90 |
neocortex | 1.02e-10 | 20 |
hemolymphoid system | 1.20e-10 | 108 |
immune system | 1.19e-09 | 93 |
musculoskeletal system | 1.75e-09 | 167 |
regional part of cerebral cortex | 5.95e-09 | 22 |
cerebral hemisphere | 8.99e-09 | 32 |
regional part of telencephalon | 1.14e-07 | 32 |
telencephalon | 1.22e-07 | 34 |
regional part of forebrain | 2.97e-07 | 41 |
forebrain | 2.97e-07 | 41 |
anterior neural tube | 2.97e-07 | 41 |
future forebrain | 2.97e-07 | 41 |
connective tissue | 3.41e-07 | 371 |
brain grey matter | 4.39e-07 | 34 |
gray matter | 4.39e-07 | 34 |
cerebral cortex | 6.76e-07 | 25 |
pallium | 6.76e-07 | 25 |