FFCP PHASE1:Hg19::chr20:50418906..50418924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57167 | |EntrezGene=57167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15924 | |HGNC=15924 | ||
|TSSclassifier=strong | |||
|UniProt=Q6Y8G6,Q6Y8G5,Q9UJQ4 | |UniProt=Q6Y8G6,Q6Y8G5,Q9UJQ4 | ||
|association_with_transcript=22bp_to_AY170621,AY170622,AY172738_5end | |||
|cluster_id=chr20:50418906..50418924,- | |||
|description=CAGE_peak_6_at_SALL4_5end | |||
|id=chr20:50418906..50418924,- | |||
|ontology_enrichment_celltype=CL:0000039!8.44e-18!7;CL:0000586!8.44e-18!7;CL:0002322!7.67e-14!5;CL:0002580!2.31e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.84e-16;5!CL:0000540;8.14e-14;6!CL:0000404;8.14e-14;6!CL:0002579;2.52e-12;3!CL:0000039;1.55e-11;7!CL:0000586;1.55e-11;7!CL:1001319;7.22e-10;1!CL:1000600;7.22e-10;1!CL:0002334;6.15e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.79e-16,5;CL:0000540,9.09e-14,6;CL:0000031,9.09e-14,6;CL:0000404,9.09e-14,6;CL:0002579,2.52e-12,3;CL:0000039,1.58e-11,7;CL:0000586,1.58e-11,7;CL:0000047,1.84e-10,8;CL:1001319,5.79e-10,1;CL:1000600,5.79e-10,1;CL:0002334,6.35e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;8.14e-14;6 | |||
|ontology_enrichment_disease=DOID:3095!5.04e-14!22;DOID:2994!5.04e-14!22;DOID:0050687!2.29e-10!143;DOID:305!2.65e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!7.24e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.22e-10;1!UBERON:0001256;7.22e-10;1!UBERON:0001259;7.22e-10;1!UBERON:0004457;4.32e-09;9!UBERON:0000042;4.32e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.79e-10,1;UBERON:0001256,5.79e-10,1;UBERON:0001259,5.79e-10,1;UBERON:0004458,9.01e-08,49;UBERON:0004457,6.48e-07,12;UBERON:0000042,6.48e-07,12 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,2.43947412259191,2.91565490307268,0.929551542956147,0.932949495138334,2.27088765788066,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0.561320188866147,1.02511319404561,0,1.76939313257968,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2551108282374,6.73735898684351,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.38338342632836,0.718061155278177,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04471047896483,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0,0,0.599428828746391,0.432271251462318,4.81053703896846,3.77508995296322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,3.05430982083536,3.71356478812531,1.24632101408756,0,0,0,0,0,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0.158013611732727,1.97610423125813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,3.80544290488219,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0.756998549010474,0.437062287854782,0.506794004045748,0.815910637935854,0.26721740526556,1.01084389488329,1.75495277504663,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,1.46525883499754,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,2.43947412259191,2.91565490307268,0.929551542956147,0.932949495138334,2.27088765788066,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0.561320188866147,1.02511319404561,0,1.76939313257968,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2551108282374,6.73735898684351,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.38338342632836,0.718061155278177,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04471047896483,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0,0,0.599428828746391,0.432271251462318,4.81053703896846,3.77508995296322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,3.05430982083536,3.71356478812531,1.24632101408756,0,0,0,0,0,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0.158013611732727,1.97610423125813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,3.80544290488219,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0.756998549010474,0.437062287854782,0.506794004045748,0.815910637935854,0.26721740526556,1.01084389488329,1.75495277504663,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,1.46525883499754,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SALL4 | |||
}} | }} |
Latest revision as of 23:55, 16 September 2015
Short description: | p6@SALL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SALL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_AY170621, AY170622, AY172738_5end |
EntrezGene: | SALL4 |
HGNC: | 15924 |
UniProt: | Q6Y8G6Q6Y8G5Q9UJQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.79e-16 | 5 |
neuron | 9.09e-14 | 6 |
neuroblast | 9.09e-14 | 6 |
electrically signaling cell | 9.09e-14 | 6 |
omentum preadipocyte | 2.52e-12 | 3 |
germ line cell | 1.58e-11 | 7 |
germ cell | 1.58e-11 | 7 |
neuronal stem cell | 1.84e-10 | 8 |
bladder cell | 5.79e-10 | 1 |
lower urinary tract cell | 5.79e-10 | 1 |
preadipocyte | 6.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.79e-10 | 1 |
wall of urinary bladder | 5.79e-10 | 1 |
mucosa of urinary bladder | 5.79e-10 | 1 |
body cavity or lining | 9.01e-08 | 49 |
cavity lining | 6.48e-07 | 12 |
serous membrane | 6.48e-07 | 12 |