FFCP PHASE1:Hg19::chr1:151009054..151009113,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149428 | |EntrezGene=149428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16976 | |HGNC=16976 | ||
|TSSclassifier=strong | |||
|UniProt=A2A492 | |UniProt=A2A492 | ||
|association_with_transcript=0bp_to_ENST00000295294,ENST00000361277_5end | |association_with_transcript=0bp_to_ENST00000295294,ENST00000361277_5end | ||
|cluster_id=chr1:151009054..151009113,+ | |||
|coexpression_cluster_id=C1369 | |||
|description=CAGE_peak_1_at_BNIPL_5end | |description=CAGE_peak_1_at_BNIPL_5end | ||
|id=chr1:151009054..151009113,+ | |id=chr1:151009054..151009113,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.06e-14!43;CL:0002159!8.37e-11!13;CL:0000223!2.46e-10!59;CL:0000622!1.96e-08!5;CL:0002251!1.40e-07!21;CL:0002368!1.54e-07!13;CL:0000066!2.28e-07!254;CL:0002077!3.41e-07!33;CL:0002322!4.32e-07!5;CL:0000154!6.31e-07!6 | |ontology_enrichment_celltype=CL:0002076!4.06e-14!43;CL:0002159!8.37e-11!13;CL:0000223!2.46e-10!59;CL:0000622!1.96e-08!5;CL:0002251!1.40e-07!21;CL:0002368!1.54e-07!13;CL:0000066!2.28e-07!254;CL:0002077!3.41e-07!33;CL:0002322!4.32e-07!5;CL:0000154!6.31e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.50e-12;19!CL:0002577;6.52e-09;3!CL:0000622;1.53e-08;5!CL:0002159;6.34e-08;14!CL:0000154;4.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.48e-12,19;CL:0002577,6.61e-09,3;CL:0000622,1.58e-08,5;CL:0002159,6.14e-08,14;CL:0000154,4.30e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!4.29e-07!4;DOID:1612!4.29e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.13e-10;4!DOID:1612;5.13e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.22e-10,4;DOID:1612,6.22e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.40e-16!72;UBERON:0005631!2.78e-14!14;UBERON:0000158!2.78e-14!14;UBERON:0000166!9.84e-14!21;UBERON:0000161!6.57e-13!35;UBERON:0004119!1.04e-11!169;UBERON:0000925!1.04e-11!169;UBERON:0006595!1.04e-11!169;UBERON:0000165!1.07e-10!28;UBERON:0000930!1.07e-10!28;UBERON:0001044!1.04e-09!6;UBERON:0003293!1.04e-09!6;UBERON:0003294!1.04e-09!6;UBERON:0010047!1.04e-09!6;UBERON:0000167!1.04e-09!6;UBERON:0003124!4.31e-09!7;UBERON:0003408!8.20e-09!10;UBERON:0000478!2.06e-08!24;UBERON:0000065!2.23e-08!53;UBERON:0004175!3.16e-08!25;UBERON:0001987!9.22e-08!4;UBERON:0004340!9.22e-08!4;UBERON:0003102!1.17e-07!95;UBERON:0000078!1.91e-07!18;UBERON:0000915!3.42e-07!52;UBERON:0000077!3.83e-07!130;UBERON:0001444!4.47e-07!48;UBERON:0000468!5.07e-07!659;UBERON:0000305!6.72e-07!7;UBERON:0005181!9.61e-07!35 | |ontology_enrichment_uberon=UBERON:0001004!2.40e-16!72;UBERON:0005631!2.78e-14!14;UBERON:0000158!2.78e-14!14;UBERON:0000166!9.84e-14!21;UBERON:0000161!6.57e-13!35;UBERON:0004119!1.04e-11!169;UBERON:0000925!1.04e-11!169;UBERON:0006595!1.04e-11!169;UBERON:0000165!1.07e-10!28;UBERON:0000930!1.07e-10!28;UBERON:0001044!1.04e-09!6;UBERON:0003293!1.04e-09!6;UBERON:0003294!1.04e-09!6;UBERON:0010047!1.04e-09!6;UBERON:0000167!1.04e-09!6;UBERON:0003124!4.31e-09!7;UBERON:0003408!8.20e-09!10;UBERON:0000478!2.06e-08!24;UBERON:0000065!2.23e-08!53;UBERON:0004175!3.16e-08!25;UBERON:0001987!9.22e-08!4;UBERON:0004340!9.22e-08!4;UBERON:0003102!1.17e-07!95;UBERON:0000078!1.91e-07!18;UBERON:0000915!3.42e-07!52;UBERON:0000077!3.83e-07!130;UBERON:0001444!4.47e-07!48;UBERON:0000468!5.07e-07!659;UBERON:0000305!6.72e-07!7;UBERON:0005181!9.61e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.03e-13;24!UBERON:0005631;8.57e-13;10!UBERON:0000158;8.57e-13;10!UBERON:0001987;7.13e-11;4!UBERON:0001044;2.00e-10;6!UBERON:0003293;2.00e-10;6!UBERON:0003294;2.00e-10;6!UBERON:0010047;2.00e-10;6!UBERON:0003408;2.00e-10;6!UBERON:0000167;2.00e-10;6!UBERON:0000165;3.77e-10;28!UBERON:0000305;4.72e-10;7!UBERON:0000161;7.35e-09;19!UBERON:0000166;7.35e-09;19!UBERON:0001041;4.70e-08;14!UBERON:0005178;5.32e-07;34!UBERON:0002224;5.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.85e-21,14;UBERON:0000158,1.85e-21,14;UBERON:0000478,1.85e-13,24;UBERON:0003124,3.49e-13,7;UBERON:0004119,9.69e-12,160;UBERON:0000925,9.69e-12,160;UBERON:0006595,9.69e-12,160;UBERON:0000166,1.50e-11,22;UBERON:0001004,2.59e-11,74;UBERON:0001987,6.14e-11,4;UBERON:0004340,6.14e-11,4;UBERON:0001044,2.00e-10,6;UBERON:0003293,2.00e-10,6;UBERON:0003294,2.00e-10,6;UBERON:0010047,2.00e-10,6;UBERON:0000167,2.00e-10,6;UBERON:0000161,3.30e-10,36;UBERON:0000305,4.77e-10,7;UBERON:0000165,1.06e-09,29;UBERON:0000930,1.06e-09,29;UBERON:0000915,3.31e-09,52;UBERON:0004871,1.01e-08,8;UBERON:0003102,3.66e-08,99;UBERON:0005178,1.03e-07,34;UBERON:0002224,1.03e-07,34;UBERON:0000153,1.77e-07,62;UBERON:0007811,1.77e-07,62;UBERON:0005181,2.02e-07,35;UBERON:0004175,6.76e-07,25;UBERON:0001444,9.57e-07,49 | |||
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| ||
|short_description=p1@BNIPL | |short_description=p1@BNIPL | ||
}} | }} |
Latest revision as of 23:52, 16 September 2015
Short description: | p1@BNIPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BNIPL_5end |
Coexpression cluster: | C1369_amniotic_immature_skin_salivary_chorionic_tongue_esophagus |
Association with transcript: | 0bp_to_ENST00000295294, ENST00000361277_5end |
EntrezGene: | BNIPL |
HGNC: | 16976 |
UniProt: | A2A492 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.48e-12 | 19 |
placental epithelial cell | 6.61e-09 | 3 |
acinar cell | 1.58e-08 | 5 |
general ecto-epithelial cell | 6.14e-08 | 14 |
protein secreting cell | 4.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.85e-21 | 14 |
membranous layer | 1.85e-21 | 14 |
extraembryonic structure | 1.85e-13 | 24 |
chorion | 3.49e-13 | 7 |
endoderm-derived structure | 9.69e-12 | 160 |
endoderm | 9.69e-12 | 160 |
presumptive endoderm | 9.69e-12 | 160 |
oral opening | 1.50e-11 | 22 |
respiratory system | 2.59e-11 | 74 |
placenta | 6.14e-11 | 4 |
allantois | 6.14e-11 | 4 |
saliva-secreting gland | 2.00e-10 | 6 |
gland of oral region | 2.00e-10 | 6 |
gland of foregut | 2.00e-10 | 6 |
oral gland | 2.00e-10 | 6 |
oral cavity | 2.00e-10 | 6 |
orifice | 3.30e-10 | 36 |
amnion | 4.77e-10 | 7 |
mouth | 1.06e-09 | 29 |
stomodeum | 1.06e-09 | 29 |
thoracic segment of trunk | 3.31e-09 | 52 |
somatic layer of lateral plate mesoderm | 1.01e-08 | 8 |
surface structure | 3.66e-08 | 99 |
thoracic cavity element | 1.03e-07 | 34 |
thoracic cavity | 1.03e-07 | 34 |
anterior region of body | 1.77e-07 | 62 |
craniocervical region | 1.77e-07 | 62 |
thoracic segment organ | 2.02e-07 | 35 |
internal genitalia | 6.76e-07 | 25 |
subdivision of head | 9.57e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.22e-10 | 4 |
breast cancer | 6.22e-10 | 4 |