FFCP PHASE1:Hg19::chr12:122688287..122688303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79369 | |EntrezGene=79369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15683 | |HGNC=15683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537991_5end | |association_with_transcript=0bp_to_ENST00000537991_5end | ||
|cluster_id=chr12:122688287..122688303,+ | |||
|description=CAGE_peak_2_at_B3GNT4_5end | |description=CAGE_peak_2_at_B3GNT4_5end | ||
|id=chr12:122688287..122688303,+ | |id=chr12:122688287..122688303,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.43e-17!254;CL:0002076!8.53e-16!43;CL:0000223!5.21e-13!59;CL:0002159!7.60e-10!13;CL:0002368!2.17e-09!13 | |ontology_enrichment_celltype=CL:0000066!1.43e-17!254;CL:0002076!8.53e-16!43;CL:0000223!5.21e-13!59;CL:0002159!7.60e-10!13;CL:0002368!2.17e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.48e-15;14!CL:0002076;3.28e-13;42!CL:0002368;9.52e-12;13!CL:0000312;1.61e-10;5!CL:0000362;2.45e-10;9!CL:0002077;1.03e-08;34!CL:0000240;1.13e-08;6!CL:0000311;1.13e-08;6!CL:0000079;1.13e-08;6!CL:0000237;1.13e-08;6!CL:0002166;3.42e-07;3 | |ontology_enrichment_celltype_v019=CL:0002159;1.48e-15;14!CL:0002076;3.28e-13;42!CL:0002368;9.52e-12;13!CL:0000312;1.61e-10;5!CL:0000362;2.45e-10;9!CL:0002077;1.03e-08;34!CL:0000240;1.13e-08;6!CL:0000311;1.13e-08;6!CL:0000079;1.13e-08;6!CL:0000237;1.13e-08;6!CL:0002166;3.42e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.44e-17,42;CL:0002159,2.51e-15,14;CL:0000066,1.02e-11,253;CL:0002368,1.29e-11,13;CL:0000223,1.79e-10,58;CL:0000312,2.41e-10,5;CL:0000362,3.16e-10,9;CL:0002077,2.45e-09,34;CL:0000240,1.57e-08,6;CL:0000311,1.57e-08,6;CL:0000079,1.57e-08,6;CL:0000237,1.57e-08,6;CL:0000036,1.57e-08,6;CL:0000357,1.57e-08,6;CL:0000114,1.57e-08,6;CL:0002166,3.39e-07,3;CL:0002621,9.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.13e-08;6!CL:0000114;1.13e-08;6!CL:0000223;9.59e-08;58!UBERON:0006215;1.80e-07;3 | |ontology_enrichment_development_v019=CL:0000357;1.13e-08;6!CL:0000114;1.13e-08;6!CL:0000223;9.59e-08;58!UBERON:0006215;1.80e-07;3 | ||
|ontology_enrichment_disease=DOID:305!1.96e-12!106;DOID:0050687!1.89e-11!143;DOID:162!1.20e-07!235;DOID:299!2.90e-07!25;DOID:14566!5.32e-07!239 | |ontology_enrichment_disease=DOID:305!1.96e-12!106;DOID:0050687!1.89e-11!143;DOID:162!1.20e-07!235;DOID:299!2.90e-07!25;DOID:14566!5.32e-07!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.42e-18!82;UBERON:0001049!3.76e-17!57;UBERON:0005068!3.76e-17!57;UBERON:0006241!3.76e-17!57;UBERON:0007135!3.76e-17!57;UBERON:0005743!5.57e-17!86;UBERON:0000955!7.50e-17!69;UBERON:0006238!7.50e-17!69;UBERON:0000073!1.85e-16!94;UBERON:0001016!1.85e-16!94;UBERON:0000924!9.54e-16!173;UBERON:0006601!9.54e-16!173;UBERON:0004121!9.71e-16!169;UBERON:0001869!2.24e-15!32;UBERON:0002020!4.16e-15!34;UBERON:0003528!4.16e-15!34;UBERON:0002616!7.07e-15!59;UBERON:0001893!7.73e-15!34;UBERON:0002791!2.70e-14!33;UBERON:0003080!1.45e-13!42;UBERON:0002780!4.49e-13!41;UBERON:0001890!4.49e-13!41;UBERON:0006240!4.49e-13!41;UBERON:0001950!6.59e-13!20;UBERON:0002619!1.43e-12!22;UBERON:0003075!2.62e-12!86;UBERON:0007284!2.62e-12!86;UBERON:0002346!3.55e-12!90;UBERON:0000033!1.42e-11!123;UBERON:0000064!3.60e-11!219;UBERON:0000956!4.12e-11!25;UBERON:0000203!4.12e-11!25;UBERON:0000153!4.32e-11!129;UBERON:0007811!4.32e-11!129;UBERON:0000475!2.74e-09!365;UBERON:0003056!2.82e-09!61;UBERON:0000062!1.74e-08!511;UBERON:0000922!5.70e-08!612;UBERON:0000483!2.34e-07!309;UBERON:0007023!2.73e-07!115;UBERON:0000119!5.11e-07!312;UBERON:0000480!9.81e-07!626 | |ontology_enrichment_uberon=UBERON:0001017!5.42e-18!82;UBERON:0001049!3.76e-17!57;UBERON:0005068!3.76e-17!57;UBERON:0006241!3.76e-17!57;UBERON:0007135!3.76e-17!57;UBERON:0005743!5.57e-17!86;UBERON:0000955!7.50e-17!69;UBERON:0006238!7.50e-17!69;UBERON:0000073!1.85e-16!94;UBERON:0001016!1.85e-16!94;UBERON:0000924!9.54e-16!173;UBERON:0006601!9.54e-16!173;UBERON:0004121!9.71e-16!169;UBERON:0001869!2.24e-15!32;UBERON:0002020!4.16e-15!34;UBERON:0003528!4.16e-15!34;UBERON:0002616!7.07e-15!59;UBERON:0001893!7.73e-15!34;UBERON:0002791!2.70e-14!33;UBERON:0003080!1.45e-13!42;UBERON:0002780!4.49e-13!41;UBERON:0001890!4.49e-13!41;UBERON:0006240!4.49e-13!41;UBERON:0001950!6.59e-13!20;UBERON:0002619!1.43e-12!22;UBERON:0003075!2.62e-12!86;UBERON:0007284!2.62e-12!86;UBERON:0002346!3.55e-12!90;UBERON:0000033!1.42e-11!123;UBERON:0000064!3.60e-11!219;UBERON:0000956!4.12e-11!25;UBERON:0000203!4.12e-11!25;UBERON:0000153!4.32e-11!129;UBERON:0007811!4.32e-11!129;UBERON:0000475!2.74e-09!365;UBERON:0003056!2.82e-09!61;UBERON:0000062!1.74e-08!511;UBERON:0000922!5.70e-08!612;UBERON:0000483!2.34e-07!309;UBERON:0007023!2.73e-07!115;UBERON:0000119!5.11e-07!312;UBERON:0000480!9.81e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.77e-20;34!UBERON:0002020;4.77e-20;34!UBERON:0001869;3.14e-19;32!UBERON:0002791;3.23e-19;32!UBERON:0002619;4.17e-19;22!UBERON:0001950;7.78e-19;20!UBERON:0001893;3.36e-17;34!UBERON:0000956;2.32e-16;25!UBERON:0000203;2.32e-16;25!UBERON:0002780;2.61e-11;41!UBERON:0001890;2.61e-11;41!UBERON:0002420;1.31e-09;9!UBERON:0007245;1.31e-09;9!UBERON:0010009;1.31e-09;9!UBERON:0010011;1.31e-09;9!UBERON:0000454;1.31e-09;9!UBERON:0001871;1.48e-09;6!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0000955;7.23e-09;68!UBERON:0001017;2.34e-08;75!UBERON:0000369;1.20e-07;4!UBERON:0002435;1.20e-07;4!UBERON:0000204;1.20e-07;4!UBERON:0000200;1.73e-07;6!UBERON:0011159;7.62e-07;5!UBERON:0000125;9.76e-07;9!UBERON:0002308;9.76e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003528;4.77e-20;34!UBERON:0002020;4.77e-20;34!UBERON:0001869;3.14e-19;32!UBERON:0002791;3.23e-19;32!UBERON:0002619;4.17e-19;22!UBERON:0001950;7.78e-19;20!UBERON:0001893;3.36e-17;34!UBERON:0000956;2.32e-16;25!UBERON:0000203;2.32e-16;25!UBERON:0002780;2.61e-11;41!UBERON:0001890;2.61e-11;41!UBERON:0002420;1.31e-09;9!UBERON:0007245;1.31e-09;9!UBERON:0010009;1.31e-09;9!UBERON:0010011;1.31e-09;9!UBERON:0000454;1.31e-09;9!UBERON:0001871;1.48e-09;6!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0000955;7.23e-09;68!UBERON:0001017;2.34e-08;75!UBERON:0000369;1.20e-07;4!UBERON:0002435;1.20e-07;4!UBERON:0000204;1.20e-07;4!UBERON:0000200;1.73e-07;6!UBERON:0011159;7.62e-07;5!UBERON:0000125;9.76e-07;9!UBERON:0002308;9.76e-07;9 | ||
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| ||
|short_description=p2@B3GNT4 | |short_description=p2@B3GNT4 | ||
}} | }} |
Latest revision as of 23:47, 16 September 2015
Short description: | p2@B3GNT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_B3GNT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537991_5end |
EntrezGene: | B3GNT4 |
HGNC: | 15683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.44e-17 | 42 |
general ecto-epithelial cell | 2.51e-15 | 14 |
epithelial cell | 1.02e-11 | 253 |
respiratory epithelial cell | 1.29e-11 | 13 |
endodermal cell | 1.79e-10 | 58 |
keratinocyte | 2.41e-10 | 5 |
epidermal cell | 3.16e-10 | 9 |
ecto-epithelial cell | 2.45e-09 | 34 |
stratified squamous epithelial cell | 1.57e-08 | 6 |
keratin accumulating cell | 1.57e-08 | 6 |
stratified epithelial cell | 1.57e-08 | 6 |
keratinizing barrier epithelial cell | 1.57e-08 | 6 |
epithelial fate stem cell | 1.57e-08 | 6 |
stratified epithelial stem cell | 1.57e-08 | 6 |
surface ectodermal cell | 1.57e-08 | 6 |
epithelial cell of Malassez | 3.39e-07 | 3 |
gingival epithelial cell | 9.59e-07 | 3 |