FFCP PHASE1:Hg19::chr2:33359646..33359686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV71,Q14766,B7ZLY3 | |UniProt=E7EV71,Q14766,B7ZLY3 | ||
|association_with_transcript=0bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266,uc002rot.2,uc002rou.2,uc002rov.2,uc010ymz.1,uc010yna.1_5end | |association_with_transcript=0bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266,uc002rot.2,uc002rou.2,uc002rov.2,uc010ymz.1,uc010yna.1_5end | ||
|cluster_id=chr2:33359646..33359686,+ | |||
|coexpression_cluster_id=C2697 | |coexpression_cluster_id=C2697 | ||
|description=CAGE_peak_1_at_LTBP1_5end | |description=CAGE_peak_1_at_LTBP1_5end | ||
|id=chr2:33359646..33359686,+ | |id=chr2:33359646..33359686,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.22e-38!180;CL:0000057!1.52e-21!75;CL:0000680!2.42e-21!57;CL:0000056!2.42e-21!57;CL:0000355!2.42e-21!57;CL:0000187!2.63e-20!54;CL:0000183!3.58e-19!59;CL:0000192!4.75e-17!42;CL:0000514!4.75e-17!42;CL:0000393!1.42e-16!60;CL:0000211!1.42e-16!60;CL:0000359!3.03e-14!32;CL:0002620!4.97e-09!23;CL:0000222!8.26e-08!119 | |ontology_enrichment_celltype=CL:0000055!1.22e-38!180;CL:0000057!1.52e-21!75;CL:0000680!2.42e-21!57;CL:0000056!2.42e-21!57;CL:0000355!2.42e-21!57;CL:0000187!2.63e-20!54;CL:0000183!3.58e-19!59;CL:0000192!4.75e-17!42;CL:0000514!4.75e-17!42;CL:0000393!1.42e-16!60;CL:0000211!1.42e-16!60;CL:0000359!3.03e-14!32;CL:0002620!4.97e-09!23;CL:0000222!8.26e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.13e-14;32!CL:0000192;2.04e-13;43!CL:0000187;9.83e-12;55!CL:0000057;7.06e-10;73!CL:0000393;1.43e-09;61!CL:0000211;1.43e-09;61!CL:0002620;2.84e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.93e-23,76;CL:0000680,1.51e-22,58;CL:0000056,1.51e-22,58;CL:0000355,1.51e-22,58;CL:0000187,1.79e-21,55;CL:0000192,4.18e-18,43;CL:0000514,4.18e-18,43;CL:0000393,7.44e-18,61;CL:0000211,7.44e-18,61;CL:0000359,1.16e-14,32;CL:0002620,2.83e-09,23;CL:0000222,1.61e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-13;43!CL:0000355;6.74e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.76e-30!83;UBERON:0002329!4.76e-30!83;UBERON:0003077!4.76e-30!83;UBERON:0003059!4.76e-30!83;UBERON:0007282!4.76e-30!83;UBERON:0009618!4.76e-30!83;UBERON:0007285!4.76e-30!83;UBERON:0004290!1.04e-25!70;UBERON:0002385!1.13e-21!63;UBERON:0001015!1.13e-21!63;UBERON:0000383!1.13e-21!63;UBERON:0000475!1.36e-21!365;UBERON:0001134!1.84e-21!61;UBERON:0002036!1.84e-21!61;UBERON:0003082!1.84e-21!61;UBERON:0000486!4.36e-20!82;UBERON:0005256!2.77e-19!143;UBERON:0001009!8.96e-18!113;UBERON:0000481!2.08e-17!347;UBERON:0004535!2.49e-17!110;UBERON:0000468!1.67e-16!659;UBERON:0004872!2.05e-15!84;UBERON:0000119!2.53e-15!312;UBERON:0001637!9.22e-15!42;UBERON:0003509!9.22e-15!42;UBERON:0004572!9.22e-15!42;UBERON:0002049!1.10e-14!79;UBERON:0007798!1.10e-14!79;UBERON:0000483!1.50e-14!309;UBERON:0003102!4.20e-14!95;UBERON:0004573!1.65e-13!33;UBERON:0004571!1.65e-13!33;UBERON:0000467!2.39e-13!625;UBERON:0000480!4.49e-13!626;UBERON:0001981!1.80e-12!60;UBERON:0007500!1.80e-12!60;UBERON:0004537!1.80e-12!60;UBERON:0006965!1.80e-12!60;UBERON:0002100!2.94e-12!216;UBERON:0000055!5.76e-12!69;UBERON:0000490!2.50e-11!138;UBERON:0000477!3.47e-11!286;UBERON:0000479!2.46e-10!787;UBERON:0003104!3.17e-10!238;UBERON:0009142!3.17e-10!238;UBERON:0004111!3.17e-10!241;UBERON:0003914!3.81e-10!118;UBERON:0002199!8.77e-10!45;UBERON:0002416!8.77e-10!45;UBERON:0002050!1.21e-09!605;UBERON:0005423!1.21e-09!605;UBERON:0000923!1.59e-09!604;UBERON:0005291!1.59e-09!604;UBERON:0006598!1.59e-09!604;UBERON:0002532!1.59e-09!604;UBERON:0000922!2.91e-09!612;UBERON:0007100!8.70e-09!27;UBERON:0000948!1.65e-08!24;UBERON:0005498!1.65e-08!24;UBERON:0004140!1.65e-08!24;UBERON:0009881!1.65e-08!24;UBERON:0004141!1.65e-08!24;UBERON:0003084!1.65e-08!24;UBERON:0007005!1.65e-08!24;UBERON:0004139!1.65e-08!24;UBERON:0004291!1.65e-08!24;UBERON:0002097!2.25e-08!40;UBERON:0000947!4.80e-08!21;UBERON:0010191!4.80e-08!21;UBERON:0000025!9.54e-08!194;UBERON:0007023!5.37e-07!115 | |ontology_enrichment_uberon=UBERON:0000914!4.76e-30!83;UBERON:0002329!4.76e-30!83;UBERON:0003077!4.76e-30!83;UBERON:0003059!4.76e-30!83;UBERON:0007282!4.76e-30!83;UBERON:0009618!4.76e-30!83;UBERON:0007285!4.76e-30!83;UBERON:0004290!1.04e-25!70;UBERON:0002385!1.13e-21!63;UBERON:0001015!1.13e-21!63;UBERON:0000383!1.13e-21!63;UBERON:0000475!1.36e-21!365;UBERON:0001134!1.84e-21!61;UBERON:0002036!1.84e-21!61;UBERON:0003082!1.84e-21!61;UBERON:0000486!4.36e-20!82;UBERON:0005256!2.77e-19!143;UBERON:0001009!8.96e-18!113;UBERON:0000481!2.08e-17!347;UBERON:0004535!2.49e-17!110;UBERON:0000468!1.67e-16!659;UBERON:0004872!2.05e-15!84;UBERON:0000119!2.53e-15!312;UBERON:0001637!9.22e-15!42;UBERON:0003509!9.22e-15!42;UBERON:0004572!9.22e-15!42;UBERON:0002049!1.10e-14!79;UBERON:0007798!1.10e-14!79;UBERON:0000483!1.50e-14!309;UBERON:0003102!4.20e-14!95;UBERON:0004573!1.65e-13!33;UBERON:0004571!1.65e-13!33;UBERON:0000467!2.39e-13!625;UBERON:0000480!4.49e-13!626;UBERON:0001981!1.80e-12!60;UBERON:0007500!1.80e-12!60;UBERON:0004537!1.80e-12!60;UBERON:0006965!1.80e-12!60;UBERON:0002100!2.94e-12!216;UBERON:0000055!5.76e-12!69;UBERON:0000490!2.50e-11!138;UBERON:0000477!3.47e-11!286;UBERON:0000479!2.46e-10!787;UBERON:0003104!3.17e-10!238;UBERON:0009142!3.17e-10!238;UBERON:0004111!3.17e-10!241;UBERON:0003914!3.81e-10!118;UBERON:0002199!8.77e-10!45;UBERON:0002416!8.77e-10!45;UBERON:0002050!1.21e-09!605;UBERON:0005423!1.21e-09!605;UBERON:0000923!1.59e-09!604;UBERON:0005291!1.59e-09!604;UBERON:0006598!1.59e-09!604;UBERON:0002532!1.59e-09!604;UBERON:0000922!2.91e-09!612;UBERON:0007100!8.70e-09!27;UBERON:0000948!1.65e-08!24;UBERON:0005498!1.65e-08!24;UBERON:0004140!1.65e-08!24;UBERON:0009881!1.65e-08!24;UBERON:0004141!1.65e-08!24;UBERON:0003084!1.65e-08!24;UBERON:0007005!1.65e-08!24;UBERON:0004139!1.65e-08!24;UBERON:0004291!1.65e-08!24;UBERON:0002097!2.25e-08!40;UBERON:0000947!4.80e-08!21;UBERON:0010191!4.80e-08!21;UBERON:0000025!9.54e-08!194;UBERON:0007023!5.37e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.08e-12;33!UBERON:0004571;2.08e-12;33!UBERON:0001637;6.09e-11;42!UBERON:0003509;6.09e-11;42!UBERON:0004572;6.09e-11;42!UBERON:0002385;2.47e-10;31!UBERON:0001015;2.47e-10;31!UBERON:0000383;2.47e-10;31!UBERON:0007100;3.27e-08;25!UBERON:0002204;4.40e-08;70!UBERON:0000947;6.01e-08;21!UBERON:0010191;6.01e-08;21!UBERON:0000948;6.40e-08;22!UBERON:0002384;3.79e-07;198!UBERON:0002097;3.84e-07;41!UBERON:0000075;3.97e-07;16!UBERON:0002199;5.18e-07;46!UBERON:0002416;5.18e-07;46!UBERON:0001135;8.26e-07;15 | |||
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|phase1_expression=26.1616866149602,116.470684996695,21.2841150184916,69.05057586366,39.7795374040286,52.3403114460221,164.644920809402,253.951389117586,40.7449579991748,50.6211909193108,2.09340350391728,0.655324116390517,4.74780560811216,873.295386486089,306.211175172594,393.310210674289,321.838877964804,278.248144437589,250.797458578321,65.1310397226208,29.1720988479282,39.8087496277172,28.9098347002367,19.8467916355682,21.4677913707113,0.0764134057479513,0,0.0787107813136792,2.36018566109342,4.98978217526377,1.23852898652861,4.59710612239464,5.72291245678675,9.61360426433648,0,0,0.293600439334847,1.10799081706375,0.200544447470142,0.217010870715852,0.447830948479849,0,0,0,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0.622822248995575,0.502497330513487,0,0,7.26479403160043,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,2.29900975981793,0,0.954053754535364,0.569212969109448,0,0,0,1.68152568894461,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0.403213486449465,0,0,109.713089841283,139.505778818356,63.0362429888605,448.907427261631,415.107790006517,148.757374972766,1903.11927129328,1365.9840809395,3.21418378357831,50.5543026214646,31.4448532781391,44.66386474472,2.18577172975525,0.741568885568859,0,0,0.132957960518865,0,0,0,64.9953072089126,83.4427557252941,96.8521999485188,50.8777147731609,138.434813949269,0,25.0793959844173,5.16833518338658,24.1921058626963,22.0915604424682,52.7706405412983,57.780680034607,62.9680108474277,1.10298924103761,0.81014194788176,0.446498641420399,0,0.337834441449967,0,0,4.03043836646896,1.31780417436063,3.87780264148325,20.9325145028416,430.377710168146,293.529526038496,369.289205288067,1107.76302933192,309.625497659166,77.3735088196384,174.000863039419,144.547183372456,233.719487585224,123.125554271695,113.44256076074,45.5585857211244,85.2740368230398,242.522681947979,374.592092196385,258.423735159635,540.256980194761,183.080383385629,219.17596667445,261.238500466182,892.766190897648,368.011614666057,789.822271307551,346.89683432636,258.64120802537,262.126472238152,172.468354035897,479.421252541181,264.750788049076,783.260254473785,81.210859862955,199.523555065162,295.368023810369,139.861881836306,59.5573590487022,221.031897427217,207.057467432892,112.534161031651,111.296731577514,129.335551102906,114.647983500259,400.843789073007,99.093434248939,237.792615337956,460.249493211497,173.446218966585,287.202760345941,85.4377792970389,124.287914163587,3.09217365061275,17.1830055972226,4.30206893083506,0,0,0.116193942869518,0.518305275076852,0.252320850875628,0,510.0254753952,246.361279327875,100.838492587311,522.878286964008,594.828692895739,0,0.337169380156203,0,0,0,0,0,0,0,0,30.8531902367581,37.041661019826,49.9829618710843,2.53510069643662,3.9313088667105,10.6342183202653,0,0,184.950099501811,128.078583071866,11.240175325762,0.100528972411631,38.7945585214239,152.804095190542,274.542783313809,40.4127757670765,18.3170039860621,734.391382445065,10.6831171343195,18.982406015641,18.0741444622868,0,0,0,0,0,26.2454735162976,46.0271031264875,22.4004653642971,135.322927804004,68.880243427809,9.20118429996507,0,0,1.24396869324463,1.15295962733569,0.75745460055828,6.85777258355426,1.52795370223311,0,17.1072446022705,18.2004662084883,0,0,178.961210615196,84.1402932848231,260.497591236014,81.0533657801267,271.818898847431,32.966807349684,92.2805264549501,28.0820079660688,170.014074387276,60.9951267700097,151.860642039177,168.571054522956,169.29794088213,75.7381109838307,21.1728519790928,95.6004342117448,189.27649763109,1.20575750823834,2.61460037580088,0.699810938274399,0,0,0,389.15076531833,110.267458400749,282.421071980622,262.343727681654,155.34009984809,110.659675282255,0,0.197030760201927,0,0,113.072107778996,16.9181810014908,9.27946575333234,8.04078073604874,8.29320377149112,0.749007023947182,8.97484377612075,20.3063601583657,643.39418257517,443.651252179934,239.527015926867,291.991089589253,451.425341656819,118.434513690485,594.258398258034,514.015938334944,186.474153325908,144.862299809507,437.724669434853,123.896081260025,255.090292078291,25.4541504701563,23.3337528191382,4.34212854858063,2.80428461064202,1.28073069364133,0.303127571446259,4.99306318531491,22.9816622930557,30.021044746072,263.340746162315,71.5683240804338,5.50998341799514,224.127775091216,87.8262409444097,34.1361552823479,234.552944273839,153.590892395855,285.802502928056,686.973609809931,295.755413180596,0,37.4947099467143,3.03867263488458,122.851459536129,167.341783398173,40.5174442224621,5.41439535488894,8.77974842990328,10.980896768476,0,4.85537492907228,0,0.170093705276516,24.6144144356439,0,52.0217160084197,16.0540727633553,2.54876273045038,3.3243040357149,6.04461837749881,6.13927654608617,7.32019262869721,5.12900250232778,14.4326444107871,11.7136222079149,31.530549564203,24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| ||
|short_description=p1@LTBP1 | |short_description=p1@LTBP1 | ||
}} | }} |
Latest revision as of 23:40, 16 September 2015
Short description: | p1@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTBP1_5end |
Coexpression cluster: | C2697_Chondrocyte_mesenchymal_Fibroblast_Smooth_Anulus_hepatic_aorta |
Association with transcript: | 0bp_to_ENST00000390003, ENST00000418533, NM_000627, NM_001166264, NM_001166265, NM_001166266, uc002rot.2, uc002rou.2, uc002rov.2, uc010ymz.1, uc010yna.1_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | E7EV71Q14766B7ZLY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.93e-23 | 76 |
muscle precursor cell | 1.51e-22 | 58 |
myoblast | 1.51e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-22 | 58 |
muscle cell | 1.79e-21 | 55 |
smooth muscle cell | 4.18e-18 | 43 |
smooth muscle myoblast | 4.18e-18 | 43 |
electrically responsive cell | 7.44e-18 | 61 |
electrically active cell | 7.44e-18 | 61 |
vascular associated smooth muscle cell | 1.16e-14 | 32 |
skin fibroblast | 2.83e-09 | 23 |
mesodermal cell | 1.61e-07 | 121 |