FFCP PHASE1:Hg19::chr2:33359579..33359590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV71,Q14766,B7ZLY3 | |UniProt=E7EV71,Q14766,B7ZLY3 | ||
|association_with_transcript=-73bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266_5end | |association_with_transcript=-73bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266_5end | ||
|cluster_id=chr2:33359579..33359590,+ | |||
|coexpression_cluster_id=C2697 | |coexpression_cluster_id=C2697 | ||
|description=CAGE_peak_4_at_LTBP1_5end | |description=CAGE_peak_4_at_LTBP1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.37e-34!180;CL:0000680!9.34e-21!57;CL:0000056!9.34e-21!57;CL:0000355!9.34e-21!57;CL:0000057!1.79e-20!75;CL:0000187!1.30e-19!54;CL:0000183!8.90e-19!59;CL:0000192!7.38e-18!42;CL:0000514!7.38e-18!42;CL:0000359!7.44e-16!32;CL:0000393!1.23e-15!60;CL:0000211!1.23e-15!60;CL:0000222!3.48e-09!119;CL:0002620!6.91e-09!23 | |ontology_enrichment_celltype=CL:0000055!2.37e-34!180;CL:0000680!9.34e-21!57;CL:0000056!9.34e-21!57;CL:0000355!9.34e-21!57;CL:0000057!1.79e-20!75;CL:0000187!1.30e-19!54;CL:0000183!8.90e-19!59;CL:0000192!7.38e-18!42;CL:0000514!7.38e-18!42;CL:0000359!7.44e-16!32;CL:0000393!1.23e-15!60;CL:0000211!1.23e-15!60;CL:0000222!3.48e-09!119;CL:0002620!6.91e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-15;32!CL:0000192;2.83e-14;43!CL:0000187;1.82e-11;55!CL:0000057;2.60e-10;73!CL:0002620;3.24e-09;23!CL:0000393;8.16e-09;61!CL:0000211;8.16e-09;61!CL:0002494;2.34e-07;16 | |ontology_enrichment_celltype_v019=CL:0000359;1.49e-15;32!CL:0000192;2.83e-14;43!CL:0000187;1.82e-11;55!CL:0000057;2.60e-10;73!CL:0002620;3.24e-09;23!CL:0000393;8.16e-09;61!CL:0000211;8.16e-09;61!CL:0002494;2.34e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-23,76;CL:0000680,1.16e-22,58;CL:0000056,1.16e-22,58;CL:0000355,1.16e-22,58;CL:0000187,2.25e-21,55;CL:0000192,3.61e-19,43;CL:0000514,3.61e-19,43;CL:0000393,3.78e-17,61;CL:0000211,3.78e-17,61;CL:0000359,1.73e-16,32;CL:0000222,6.07e-10,121;CL:0002620,2.67e-09,23;CL:0002494,2.23e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.83e-14;43!CL:0000355;2.11e-11;58 | |ontology_enrichment_development_v019=CL:0000514;2.83e-14;43!CL:0000355;2.11e-11;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.94e-31!83;UBERON:0002329!6.94e-31!83;UBERON:0003077!6.94e-31!83;UBERON:0003059!6.94e-31!83;UBERON:0007282!6.94e-31!83;UBERON:0009618!6.94e-31!83;UBERON:0007285!6.94e-31!83;UBERON:0004290!2.75e-26!70;UBERON:0001009!1.56e-24!113;UBERON:0004535!4.86e-24!110;UBERON:0000486!1.01e-21!82;UBERON:0002385!2.47e-21!63;UBERON:0001015!2.47e-21!63;UBERON:0000383!2.47e-21!63;UBERON:0001134!4.91e-21!61;UBERON:0002036!4.91e-21!61;UBERON:0003082!4.91e-21!61;UBERON:0004872!1.79e-20!84;UBERON:0002049!3.36e-20!79;UBERON:0007798!3.36e-20!79;UBERON:0001637!4.76e-19!42;UBERON:0003509!4.76e-19!42;UBERON:0004572!4.76e-19!42;UBERON:0005256!2.11e-18!143;UBERON:0000055!3.53e-17!69;UBERON:0001981!1.29e-16!60;UBERON:0007500!1.29e-16!60;UBERON:0004537!1.29e-16!60;UBERON:0006965!1.29e-16!60;UBERON:0000481!1.48e-16!347;UBERON:0004573!2.81e-16!33;UBERON:0004571!2.81e-16!33;UBERON:0000475!2.87e-16!365;UBERON:0000119!3.68e-16!312;UBERON:0000468!1.00e-15!659;UBERON:0000483!4.54e-15!309;UBERON:0000477!1.46e-13!286;UBERON:0000467!2.14e-13!625;UBERON:0000480!3.44e-13!626;UBERON:0003914!1.93e-12!118;UBERON:0003102!2.68e-12!95;UBERON:0004111!3.40e-12!241;UBERON:0000490!4.83e-11!138;UBERON:0002100!7.17e-11!216;UBERON:0003104!1.95e-10!238;UBERON:0009142!1.95e-10!238;UBERON:0007100!3.73e-10!27;UBERON:0000948!7.12e-10!24;UBERON:0005498!7.12e-10!24;UBERON:0004140!7.12e-10!24;UBERON:0009881!7.12e-10!24;UBERON:0004141!7.12e-10!24;UBERON:0003084!7.12e-10!24;UBERON:0007005!7.12e-10!24;UBERON:0004139!7.12e-10!24;UBERON:0004291!7.12e-10!24;UBERON:0000947!1.71e-09!21;UBERON:0010191!1.71e-09!21;UBERON:0002050!1.75e-09!605;UBERON:0005423!1.75e-09!605;UBERON:0000923!2.60e-09!604;UBERON:0005291!2.60e-09!604;UBERON:0006598!2.60e-09!604;UBERON:0002532!2.60e-09!604;UBERON:0000922!3.22e-09!612;UBERON:0000025!4.80e-09!194;UBERON:0002199!3.07e-08!45;UBERON:0002416!3.07e-08!45;UBERON:0000479!4.53e-08!787;UBERON:0002097!4.72e-08!40;UBERON:0000926!2.29e-07!448;UBERON:0004120!2.29e-07!448;UBERON:0006603!2.29e-07!448;UBERON:0002067!8.65e-07!9;UBERON:0004016!8.65e-07!9;UBERON:0010083!8.65e-07!9 | |ontology_enrichment_uberon=UBERON:0000914!6.94e-31!83;UBERON:0002329!6.94e-31!83;UBERON:0003077!6.94e-31!83;UBERON:0003059!6.94e-31!83;UBERON:0007282!6.94e-31!83;UBERON:0009618!6.94e-31!83;UBERON:0007285!6.94e-31!83;UBERON:0004290!2.75e-26!70;UBERON:0001009!1.56e-24!113;UBERON:0004535!4.86e-24!110;UBERON:0000486!1.01e-21!82;UBERON:0002385!2.47e-21!63;UBERON:0001015!2.47e-21!63;UBERON:0000383!2.47e-21!63;UBERON:0001134!4.91e-21!61;UBERON:0002036!4.91e-21!61;UBERON:0003082!4.91e-21!61;UBERON:0004872!1.79e-20!84;UBERON:0002049!3.36e-20!79;UBERON:0007798!3.36e-20!79;UBERON:0001637!4.76e-19!42;UBERON:0003509!4.76e-19!42;UBERON:0004572!4.76e-19!42;UBERON:0005256!2.11e-18!143;UBERON:0000055!3.53e-17!69;UBERON:0001981!1.29e-16!60;UBERON:0007500!1.29e-16!60;UBERON:0004537!1.29e-16!60;UBERON:0006965!1.29e-16!60;UBERON:0000481!1.48e-16!347;UBERON:0004573!2.81e-16!33;UBERON:0004571!2.81e-16!33;UBERON:0000475!2.87e-16!365;UBERON:0000119!3.68e-16!312;UBERON:0000468!1.00e-15!659;UBERON:0000483!4.54e-15!309;UBERON:0000477!1.46e-13!286;UBERON:0000467!2.14e-13!625;UBERON:0000480!3.44e-13!626;UBERON:0003914!1.93e-12!118;UBERON:0003102!2.68e-12!95;UBERON:0004111!3.40e-12!241;UBERON:0000490!4.83e-11!138;UBERON:0002100!7.17e-11!216;UBERON:0003104!1.95e-10!238;UBERON:0009142!1.95e-10!238;UBERON:0007100!3.73e-10!27;UBERON:0000948!7.12e-10!24;UBERON:0005498!7.12e-10!24;UBERON:0004140!7.12e-10!24;UBERON:0009881!7.12e-10!24;UBERON:0004141!7.12e-10!24;UBERON:0003084!7.12e-10!24;UBERON:0007005!7.12e-10!24;UBERON:0004139!7.12e-10!24;UBERON:0004291!7.12e-10!24;UBERON:0000947!1.71e-09!21;UBERON:0010191!1.71e-09!21;UBERON:0002050!1.75e-09!605;UBERON:0005423!1.75e-09!605;UBERON:0000923!2.60e-09!604;UBERON:0005291!2.60e-09!604;UBERON:0006598!2.60e-09!604;UBERON:0002532!2.60e-09!604;UBERON:0000922!3.22e-09!612;UBERON:0000025!4.80e-09!194;UBERON:0002199!3.07e-08!45;UBERON:0002416!3.07e-08!45;UBERON:0000479!4.53e-08!787;UBERON:0002097!4.72e-08!40;UBERON:0000926!2.29e-07!448;UBERON:0004120!2.29e-07!448;UBERON:0006603!2.29e-07!448;UBERON:0002067!8.65e-07!9;UBERON:0004016!8.65e-07!9;UBERON:0010083!8.65e-07!9 | ||
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| ||
|short_description=p4@LTBP1 | |short_description=p4@LTBP1 | ||
}} | }} |
Latest revision as of 23:39, 16 September 2015
Short description: | p4@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP1_5end |
Coexpression cluster: | C2697_Chondrocyte_mesenchymal_Fibroblast_Smooth_Anulus_hepatic_aorta |
Association with transcript: | -73bp_to_ENST00000390003, ENST00000418533, NM_000627, NM_001166264, NM_001166265, NM_001166266_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | E7EV71Q14766B7ZLY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.01e-23 | 76 |
muscle precursor cell | 1.16e-22 | 58 |
myoblast | 1.16e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-22 | 58 |
muscle cell | 2.25e-21 | 55 |
smooth muscle cell | 3.61e-19 | 43 |
smooth muscle myoblast | 3.61e-19 | 43 |
electrically responsive cell | 3.78e-17 | 61 |
electrically active cell | 3.78e-17 | 61 |
vascular associated smooth muscle cell | 1.73e-16 | 32 |
mesodermal cell | 6.07e-10 | 121 |
skin fibroblast | 2.67e-09 | 23 |
cardiocyte | 2.23e-07 | 16 |