FFCP PHASE1:Hg19::chr19:2256429..2256440,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:2256429..2256440,-
|short_description=p2@JSRP1
|description=CAGE_peak_2_at_JSRP1_5end
|association_with_transcript=-7bp_to_ENST00000300961,NM_144616_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126306 | |EntrezGene=126306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24963 | |HGNC=24963 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MG2 | |UniProt=Q96MG2 | ||
|association_with_transcript=-7bp_to_ENST00000300961,NM_144616_5end | |||
|cluster_id=chr19:2256429..2256440,- | |||
|description=CAGE_peak_2_at_JSRP1_5end | |||
|id=chr19:2256429..2256440,- | |||
|ontology_enrichment_celltype=CL:0000945!8.40e-08!24;CL:0000826!8.40e-08!24;CL:0000188!2.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000515;1.44e-14;3!CL:0000056;4.72e-11;4!CL:0000239;2.89e-07;3!CL:1000615;2.89e-07;3!CL:0002306;2.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.81e-11,4;CL:0000239,3.18e-07,3;CL:1000615,3.18e-07,3;CL:0002306,3.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;4.72e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-08!115;UBERON:0003887!2.09e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.18e-23;16!UBERON:0002036;6.18e-23;16!UBERON:0005090;4.32e-11;2!UBERON:0001630;4.32e-11;2!UBERON:0002385;5.33e-11;31!UBERON:0001015;5.33e-11;31!UBERON:0000383;5.33e-11;31!UBERON:0000341;1.76e-10;2!UBERON:0001723;1.20e-07;3!UBERON:0001033;1.20e-07;3!UBERON:0006853;2.89e-07;3!UBERON:0007685;2.89e-07;3!UBERON:0004134;2.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0000341,1.42e-10,2;UBERON:0001723,1.18e-07,3;UBERON:0001033,1.18e-07,3;UBERON:0010056,1.18e-07,3;UBERON:0006853,3.18e-07,3;UBERON:0007685,3.18e-07,3;UBERON:0004134,3.18e-07,3 | |||
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| ||
|short_description=p2@JSRP1 | |||
}} | }} |
Latest revision as of 23:30, 16 September 2015
Short description: | p2@JSRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JSRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000300961, NM_144616_5end |
EntrezGene: | JSRP1 |
HGNC: | 24963 |
UniProt: | Q96MG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.81e-11 | 4 |
brush border epithelial cell | 3.18e-07 | 3 |
kidney cortex tubule cell | 3.18e-07 | 3 |
epithelial cell of proximal tubule | 3.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 4.02e-11 | 2 |
muscle organ | 4.02e-11 | 2 |
throat | 1.42e-10 | 2 |
tongue | 1.18e-07 | 3 |
gustatory system | 1.18e-07 | 3 |
future tongue | 1.18e-07 | 3 |
renal cortex tubule | 3.18e-07 | 3 |
region of nephron tubule | 3.18e-07 | 3 |
proximal tubule | 3.18e-07 | 3 |