FFCP PHASE1:Hg19::chr1:150780808..150780829,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150780808..150780829,- to FFCP PHASE1:Hg19::chr1:150780808..150780829,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1513 | |EntrezGene=1513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2536 | |HGNC=2536 | ||
|TSSclassifier=strong | |||
|UniProt=P43235 | |UniProt=P43235 | ||
|association_with_transcript=0bp_to_uc001evp.1,uc001evq.1,uc009wma.1_5end | |||
|cluster_id=chr1:150780808..150780829,- | |||
|coexpression_cluster_id=C3863 | |||
|description=CAGE_peak_3_at_CTSK_5end | |||
|id=chr1:150780808..150780829,- | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-25!180;CL:0000057!5.25e-18!75;CL:0000187!1.05e-09!54;CL:0002620!2.53e-09!23;CL:0000680!3.71e-09!57;CL:0000056!3.71e-09!57;CL:0000355!3.71e-09!57;CL:0000192!1.11e-08!42;CL:0000514!1.11e-08!42;CL:0000183!1.46e-08!59;CL:0000393!1.48e-08!60;CL:0000211!1.48e-08!60;CL:0000136!4.44e-08!15;CL:0002334!1.27e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.16e-11;23!CL:0000134;8.28e-09;55!CL:0002334;8.29e-09;12!CL:0000723;2.98e-08;61!CL:0000136;1.12e-07;13!CL:0000057;1.17e-07;73!CL:0000048;1.37e-07;58!CL:0002320;1.63e-07;188!CL:0002570;6.38e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-19,76;CL:0002620,5.20e-11,23;CL:0000048,1.19e-09,427;CL:0000136,2.37e-09,15;CL:0000187,3.49e-09,55;CL:0000723,3.49e-09,433;CL:0002334,8.28e-09,12;CL:0000034,3.17e-08,441;CL:0000680,4.14e-08,58;CL:0000056,4.14e-08,58;CL:0000355,4.14e-08,58;CL:0000192,4.15e-08,43;CL:0000514,4.15e-08,43;CL:0000393,1.29e-07,61;CL:0000211,1.29e-07,61;CL:0002570,6.10e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.93e-17!83;UBERON:0002329!3.93e-17!83;UBERON:0003077!3.93e-17!83;UBERON:0003059!3.93e-17!83;UBERON:0007282!3.93e-17!83;UBERON:0009618!3.93e-17!83;UBERON:0007285!3.93e-17!83;UBERON:0003102!2.78e-13!95;UBERON:0004290!3.18e-13!70;UBERON:0000486!4.76e-11!82;UBERON:0002199!6.80e-11!45;UBERON:0002416!6.80e-11!45;UBERON:0002385!3.26e-10!63;UBERON:0001015!3.26e-10!63;UBERON:0000383!3.26e-10!63;UBERON:0001134!9.43e-10!61;UBERON:0002036!9.43e-10!61;UBERON:0003082!9.43e-10!61;UBERON:0001013!6.81e-09!14;UBERON:0000475!7.49e-09!365;UBERON:0002097!1.02e-08!40;UBERON:0000468!2.01e-08!659;UBERON:0004573!1.77e-07!33;UBERON:0004571!1.77e-07!33;UBERON:0001637!3.62e-07!42;UBERON:0003509!3.62e-07!42;UBERON:0004572!3.62e-07!42;UBERON:0004872!4.61e-07!84;UBERON:0007023!6.28e-07!115;UBERON:0005256!9.17e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.71e-10;14!UBERON:0002199;4.40e-09;46!UBERON:0002416;4.40e-09;46!UBERON:0002097;1.64e-08;41!UBERON:0004573;3.34e-08;33!UBERON:0004571;3.34e-08;33!UBERON:0002384;4.91e-08;198!UBERON:0003102;1.91e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.91e-14,99;UBERON:0002199,7.59e-14,46;UBERON:0002416,7.59e-14,46;UBERON:0007524,6.82e-13,73;UBERON:0002329,1.08e-12,71;UBERON:0003059,1.08e-12,71;UBERON:0007282,1.08e-12,71;UBERON:0004290,1.08e-12,71;UBERON:0009618,1.08e-12,71;UBERON:0003077,2.75e-12,72;UBERON:0007285,2.75e-12,72;UBERON:0002097,3.47e-11,41;UBERON:0000486,1.65e-10,83;UBERON:0001013,2.53e-10,14;UBERON:0007503,4.09e-10,78;UBERON:0002385,2.11e-09,64;UBERON:0001015,2.11e-09,64;UBERON:0000383,2.11e-09,64;UBERON:0000926,5.69e-09,315;UBERON:0004120,5.69e-09,315;UBERON:0006603,5.69e-09,315;UBERON:0001134,6.89e-09,62;UBERON:0002036,6.89e-09,62;UBERON:0003082,6.89e-09,62;UBERON:0004573,9.95e-09,33;UBERON:0004571,9.95e-09,33;UBERON:0001637,1.91e-07,42;UBERON:0003509,1.91e-07,42;UBERON:0004572,1.91e-07,42 | |||
|phase1_expression=32.3387515101591,19.4831476740795,17.1964372997085,13.009528785907,18.3254048715188,11.3404008133048,2.53299878168311,24.0053551902196,24.290263422585,0.245733936501509,0,0,0,12.2528689430446,5.63375538737457,6.05092631806598,5.42425075221579,5.84248072309899,3.90346239032406,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,29.7807580739099,20.7291946252147,23.439376654711,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.767175371061182,3.2529523714611,2.50668955317945,3.18662341713812,11.9292892057665,4.86634870302636,0.283604451492204,0,0.175669571386252,5.63210024640164,0,0,0,0,1.06366368415092,0,0,0,1.19257444420023,6.02164216574287,2.08284300964557,0,3.77549492588915,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.625098097988558,0,0.675668882899933,0,0,0.183201743930407,0,0,0,3.47880366186723,3.54565432660823,7.94455084879313,15.7760141411848,6.73869926176878,1.68203280042692,0,0,4.66816553099649,4.58016285036939,2.12500474047496,0.908144565869588,2.30470369792,1.64025002283658,31.8403278366927,10.8389646093445,29.4413900687048,7.98554590777601,7.93177427403845,6.03938468819669,14.2907919878425,9.5810767503179,13.8456546775526,65.340157150513,35.3591708868336,0,0.718618141816238,12.2885363186468,7.38199267244589,6.92660288710457,6.14568669233173,11.3400484445637,21.6342804825499,0.680593098960126,3.94657198515496,10.0371972744727,8.26534414522291,12.3037349394605,11.1296731577514,2.06112432036503,6.32797311527405,5.23206629947925,7.2103383819287,3.5340728394176,14.9120835800525,15.1947293409683,9.9402685904652,3.92933183087797,4.57813599238317,0.57978255948989,1.36373060295417,0.573609190778008,0.121973706129595,0.132529768321485,0.580969714347592,0.10366105501537,0.504641701751257,0.36497735907583,6.25798129319264,10.2918550110862,4.14404764057442,27.3977077538868,49.8096842352014,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,2.74375713521564,0,0.703702806881416,0,0.325808305310325,2.07986957055916,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,12.0646332982825,6.31811515875942,6.24250881612659,0.93733833986777,0.16798212819886,0.992425680696705,0.895585227028483,1.16253575405585,0.766765358330422,0,0,0,0,0.12624243342638,12.0645999155121,13.3695948945397,9.37739577680376,5.13217338068116,12.8534365879154,2.10240140490742,36.585783376714,1.90622843387113,1.74384027533312,2.0534720029866,5.68795549334222,10.7296933755565,9.298330278116,30.0510071740904,11.4408180602503,3.34369586540785,1.41849132023278,1.0656887160644,0.57191197463259,0,0,5.86325131728723,0,0,3.91871190177462,3.48613383440118,0.099972991182057,19.4598049025905,5.02257091432126,6.32501818449095,0.239624855491583,2.29723871668228,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,5.76650011079957,6.5022167737758,2.98391526069709,4.57535895367776,6.60187258549499,5.67728694122165,4.68565659970853,23.7747418784898,191.022303407027,40.3544978040769,3.32112799267718,3.31864503375066,41.7041349446798,0.783204629850962,2.05886054286514,0,0,0,0,0,0.604780586659361,17.1194387394956,5.06424511850606,15.155645099386,25.3715515526288,7.67560873600055,3.86049410744658,8.90508398669946,13.2620336670284,11.8966355959795,17.657338542969,32.7130290385681,17.199136012074,0,0.200506470303285,0,3.09999010044438,9.28664956834257,19.799786658873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,1.30151357865721,3.91555844261345,0,0,1.72279661398852,1.95018073810956,8.03419649220798,2.70678011217942,1.54048617114644,3.07007349452259,2.20538515975249,12.8904293841928,5.80066775656914,1.87498580315422,3.29418531892928,0,0,0,0,4.64845549297286,18.2591161161771,9.7585217822484,4.92853728281742,4.7907542728532,5.21959795245044,8.52491407878032,0.286249773483982,7.07100901783368,2.84741482246853,0.953150969619124,0.767693373934002,5.56320684444097,4.45484547096312,3.92474320099615,12.591072030832,0.823611089208164,1.64937363283961,2.42618977887979,0,5.89761838734574,0.48763373908959,11.6982475023017,6.33900880540533,3.13949796238367,3.95935209470396,10.1707304958219,3.30819206127675,7.96126770289464,3.06915619677634,6.36653087693356,18.3650530573057,0,1.54911749049875,1.12678241012897,0.430234056612155,0,0,24.1237523568007,20.8996558944687,10.8667314676768,1.13841952129715,2.44954304171488,0.0962221127255121,0,0,2.91845782408015,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,12.5997034173829,0,0,0,0,0,0,0,0.844016498463076,0,0,0,8.96615947129814,4.42054264849836,0,0,0,11.5084647434869,0,0,0,9.9629839693303,0,0,0,0.927680981618513,0,0,0,15.2249910841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| |phase1_expression=32.3387515101591,19.4831476740795,17.1964372997085,13.009528785907,18.3254048715188,11.3404008133048,2.53299878168311,24.0053551902196,24.290263422585,0.245733936501509,0,0,0,12.2528689430446,5.63375538737457,6.05092631806598,5.42425075221579,5.84248072309899,3.90346239032406,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,29.7807580739099,20.7291946252147,23.439376654711,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.767175371061182,3.2529523714611,2.50668955317945,3.18662341713812,11.9292892057665,4.86634870302636,0.283604451492204,0,0.175669571386252,5.63210024640164,0,0,0,0,1.06366368415092,0,0,0,1.19257444420023,6.02164216574287,2.08284300964557,0,3.77549492588915,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.625098097988558,0,0.675668882899933,0,0,0.183201743930407,0,0,0,3.47880366186723,3.54565432660823,7.94455084879313,15.7760141411848,6.73869926176878,1.68203280042692,0,0,4.66816553099649,4.58016285036939,2.12500474047496,0.908144565869588,2.30470369792,1.64025002283658,31.8403278366927,10.8389646093445,29.4413900687048,7.98554590777601,7.93177427403845,6.03938468819669,14.2907919878425,9.5810767503179,13.8456546775526,65.340157150513,35.3591708868336,0,0.718618141816238,12.2885363186468,7.38199267244589,6.92660288710457,6.14568669233173,11.3400484445637,21.6342804825499,0.680593098960126,3.94657198515496,10.0371972744727,8.26534414522291,12.3037349394605,11.1296731577514,2.06112432036503,6.32797311527405,5.23206629947925,7.2103383819287,3.5340728394176,14.9120835800525,15.1947293409683,9.9402685904652,3.92933183087797,4.57813599238317,0.57978255948989,1.36373060295417,0.573609190778008,0.121973706129595,0.132529768321485,0.580969714347592,0.10366105501537,0.504641701751257,0.36497735907583,6.25798129319264,10.2918550110862,4.14404764057442,27.3977077538868,49.8096842352014,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,2.74375713521564,0,0.703702806881416,0,0.325808305310325,2.07986957055916,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,0,0,12.0646332982825,6.31811515875942,6.24250881612659,0.93733833986777,0.16798212819886,0.992425680696705,0.895585227028483,1.16253575405585,0.766765358330422,0,0,0,0,0.12624243342638,12.0645999155121,13.3695948945397,9.37739577680376,5.13217338068116,12.8534365879154,2.10240140490742,36.585783376714,1.90622843387113,1.74384027533312,2.0534720029866,5.68795549334222,10.7296933755565,9.298330278116,30.0510071740904,11.4408180602503,3.34369586540785,1.41849132023278,1.0656887160644,0.57191197463259,0,0,5.86325131728723,0,0,3.91871190177462,3.48613383440118,0.099972991182057,19.4598049025905,5.02257091432126,6.32501818449095,0.239624855491583,2.29723871668228,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,5.76650011079957,6.5022167737758,2.98391526069709,4.57535895367776,6.60187258549499,5.67728694122165,4.68565659970853,23.7747418784898,191.022303407027,40.3544978040769,3.32112799267718,3.31864503375066,41.7041349446798,0.783204629850962,2.05886054286514,0,0,0,0,0,0.604780586659361,17.1194387394956,5.06424511850606,15.155645099386,25.3715515526288,7.67560873600055,3.86049410744658,8.90508398669946,13.2620336670284,11.8966355959795,17.657338542969,32.7130290385681,17.199136012074,0,0.200506470303285,0,3.09999010044438,9.28664956834257,19.799786658873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,1.30151357865721,3.91555844261345,0,0,1.72279661398852,1.95018073810956,8.03419649220798,2.70678011217942,1.54048617114644,3.07007349452259,2.20538515975249,12.8904293841928,5.80066775656914,1.87498580315422,3.29418531892928,0,0,0,0,4.64845549297286,18.2591161161771,9.7585217822484,4.92853728281742,4.7907542728532,5.21959795245044,8.52491407878032,0.286249773483982,7.07100901783368,2.84741482246853,0.953150969619124,0.767693373934002,5.56320684444097,4.45484547096312,3.92474320099615,12.591072030832,0.823611089208164,1.64937363283961,2.42618977887979,0,5.89761838734574,0.48763373908959,11.6982475023017,6.33900880540533,3.13949796238367,3.95935209470396,10.1707304958219,3.30819206127675,7.96126770289464,3.06915619677634,6.36653087693356,18.3650530573057,0,1.54911749049875,1.12678241012897,0.430234056612155,0,0,24.1237523568007,20.8996558944687,10.8667314676768,1.13841952129715,2.44954304171488,0.0962221127255121,0,0,2.91845782408015,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,12.5997034173829,0,0,0,0,0,0,0,0.844016498463076,0,0,0,8.96615947129814,4.42054264849836,0,0,0,11.5084647434869,0,0,0,9.9629839693303,0,0,0,0.927680981618513,0,0,0,15.2249910841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| ||
|short_description=p3@CTSK | |||
}} | }} |
Latest revision as of 23:11, 16 September 2015
Short description: | p3@CTSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSK_5end |
Coexpression cluster: | C3863_Osteoblast_leiomyoma_Fibroblast_mesenchymal_Melanocyte_Mesenchymal_Adipocyte |
Association with transcript: | 0bp_to_uc001evp.1, uc001evq.1, uc009wma.1_5end |
EntrezGene: | CTSK |
HGNC: | 2536 |
UniProt: | P43235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-19 | 76 |
skin fibroblast | 5.20e-11 | 23 |
multi fate stem cell | 1.19e-09 | 427 |
fat cell | 2.37e-09 | 15 |
muscle cell | 3.49e-09 | 55 |
somatic stem cell | 3.49e-09 | 433 |
preadipocyte | 8.28e-09 | 12 |
stem cell | 3.17e-08 | 441 |
muscle precursor cell | 4.14e-08 | 58 |
myoblast | 4.14e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.14e-08 | 58 |
smooth muscle cell | 4.15e-08 | 43 |
smooth muscle myoblast | 4.15e-08 | 43 |
electrically responsive cell | 1.29e-07 | 61 |
electrically active cell | 1.29e-07 | 61 |
mesenchymal stem cell of adipose | 6.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.91e-14 | 99 |
integument | 7.59e-14 | 46 |
integumental system | 7.59e-14 | 46 |
dense mesenchyme tissue | 6.82e-13 | 73 |
somite | 1.08e-12 | 71 |
presomitic mesoderm | 1.08e-12 | 71 |
presumptive segmental plate | 1.08e-12 | 71 |
dermomyotome | 1.08e-12 | 71 |
trunk paraxial mesoderm | 1.08e-12 | 71 |
paraxial mesoderm | 2.75e-12 | 72 |
presumptive paraxial mesoderm | 2.75e-12 | 72 |
skin of body | 3.47e-11 | 41 |
multilaminar epithelium | 1.65e-10 | 83 |
adipose tissue | 2.53e-10 | 14 |
epithelial vesicle | 4.09e-10 | 78 |
muscle tissue | 2.11e-09 | 64 |
musculature | 2.11e-09 | 64 |
musculature of body | 2.11e-09 | 64 |
mesoderm | 5.69e-09 | 315 |
mesoderm-derived structure | 5.69e-09 | 315 |
presumptive mesoderm | 5.69e-09 | 315 |
skeletal muscle tissue | 6.89e-09 | 62 |
striated muscle tissue | 6.89e-09 | 62 |
myotome | 6.89e-09 | 62 |
systemic artery | 9.95e-09 | 33 |
systemic arterial system | 9.95e-09 | 33 |
artery | 1.91e-07 | 42 |
arterial blood vessel | 1.91e-07 | 42 |
arterial system | 1.91e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.02e-07 | 14 |