FFCP PHASE1:Hg19::chr11:15989432..15989436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=404bp_to_AK021785_5end | |association_with_transcript=404bp_to_AK021785_5end | ||
|cluster_id=chr11:15989432..15989436,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_17_at_SOX6_5end | |description=CAGE_peak_17_at_SOX6_5end | ||
|id=chr11:15989432..15989436,- | |id=chr11:15989432..15989436,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.49e-23;2!CL:0000764;3.49e-23;2!CL:0000558;3.49e-23;2!CL:0002097;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.78e-23,2;CL:0000765,1.78e-23,2;CL:0000050,1.78e-23,2;CL:0000038,1.78e-23,2;CL:0000558,1.78e-23,2;CL:0000547,1.78e-23,2;CL:0000549,1.78e-23,2;CL:0000550,1.78e-23,2;CL:0000552,1.78e-23,2;CL:0002097,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.51e-18;10!DOID:3095;1.88e-08;22!DOID:2994;1.88e-08;22!DOID:1909;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.40e-18,10;DOID:3095,1.84e-08,22;DOID:2994,1.84e-08,22;DOID:1909,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!3.94e-21!90;UBERON:0002780!4.61e-20!41;UBERON:0001890!4.61e-20!41;UBERON:0006240!4.61e-20!41;UBERON:0001049!5.82e-20!57;UBERON:0005068!5.82e-20!57;UBERON:0006241!5.82e-20!57;UBERON:0007135!5.82e-20!57;UBERON:0003080!2.34e-19!42;UBERON:0005743!2.66e-19!86;UBERON:0001017!1.29e-18!82;UBERON:0000924!3.57e-18!173;UBERON:0006601!3.57e-18!173;UBERON:0003075!1.58e-17!86;UBERON:0007284!1.58e-17!86;UBERON:0007023!2.13e-17!115;UBERON:0000073!5.52e-17!94;UBERON:0001016!5.52e-17!94;UBERON:0001893!1.23e-16!34;UBERON:0001869!1.51e-16!32;UBERON:0000955!7.75e-16!69;UBERON:0006238!7.75e-16!69;UBERON:0002791!9.41e-16!33;UBERON:0003056!1.50e-15!61;UBERON:0004121!2.03e-15!169;UBERON:0002616!3.97e-15!59;UBERON:0000956!4.41e-14!25;UBERON:0000203!4.41e-14!25;UBERON:0002020!1.15e-13!34;UBERON:0003528!1.15e-13!34;UBERON:0002619!2.17e-13!22;UBERON:0000153!3.42e-13!129;UBERON:0007811!3.42e-13!129;UBERON:0000033!3.71e-13!123;UBERON:0001950!3.85e-13!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.02e-45;4!UBERON:0000923;3.02e-45;4!UBERON:0010316;3.02e-45;4!UBERON:0005291;3.02e-45;4!UBERON:0002050;2.73e-36;5!UBERON:0005423;2.73e-36;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,2.60279707715243,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,2.85037839639715,1.8300481571743,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0.755798243562828,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,1.45802306691627,0,0,0.241192877250816,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0.90392296312213,0,0,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0.393709926058995,0,0,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.104909176269996,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.250381861413,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.454947352624943,1.7127920012698,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,2.7157204792644,13.6047948865077,3.09839410647505,0,0,0,0,0.352675943690684,1.2249819094128,0.128458450192919,1.41696576325585,0.638535436228605,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.294443155503077,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0,0.337687923091973,0.781078098613847,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,1.40696995487696,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0.431855182437243,0,0.357382720883282,0.158013611732727,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,2.3196288626764,0,0.701818390386317,0,0,0,0,0.150962843566674,1.00326405540328,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0.23806443146374,0.129177819672012,0,0,0.0636471582781649,0.404234377916439,0.653150243690884,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,2.60279707715243,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,2.85037839639715,1.8300481571743,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0.755798243562828,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,1.45802306691627,0,0,0.241192877250816,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0.90392296312213,0,0,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0.393709926058995,0,0,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.104909176269996,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.250381861413,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.454947352624943,1.7127920012698,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,2.7157204792644,13.6047948865077,3.09839410647505,0,0,0,0,0.352675943690684,1.2249819094128,0.128458450192919,1.41696576325585,0.638535436228605,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.294443155503077,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0,0.337687923091973,0.781078098613847,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,1.40696995487696,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0.431855182437243,0,0.357382720883282,0.158013611732727,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,2.3196288626764,0,0.701818390386317,0,0,0,0,0.150962843566674,1.00326405540328,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0.23806443146374,0.129177819672012,0,0,0.0636471582781649,0.404234377916439,0.653150243690884,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p17@SOX6 | |short_description=p17@SOX6 | ||
}} | }} |
Latest revision as of 22:45, 16 September 2015
Short description: | p17@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 404bp_to_AK021785_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.78e-23 | 2 |
erythroblast | 1.78e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 1.78e-23 | 2 |
erythroid progenitor cell | 1.78e-23 | 2 |
reticulocyte | 1.78e-23 | 2 |
proerythroblast | 1.78e-23 | 2 |
basophilic erythroblast | 1.78e-23 | 2 |
polychromatophilic erythroblast | 1.78e-23 | 2 |
orthochromatic erythroblast | 1.78e-23 | 2 |
cortical cell of adrenal gland | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.40e-18 | 10 |
germ cell and embryonal cancer | 1.84e-08 | 22 |
germ cell cancer | 1.84e-08 | 22 |
melanoma | 7.61e-07 | 2 |